RNA–Protein interactions for RNA: ENST00000383282.3

NPHP3-202, Transcript of nephrocystin 3, humanhuman

TSL 1 (best) BASIC

Gene NPHP3, Length 782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-202ENST00000383282 Q96NJ1 140 aa13.71□□□□□ -0.21
NPHP3-202ENST00000383282 GTF2H5Q6ZYL4 71 aa13.69□□□□□ -0.22
NPHP3-202ENST00000383282 C14orf132Q9NPU4 83 aa13.66□□□□□ -0.22
NPHP3-202ENST00000383282 PDE6GP18545 87 aa13.65□□□□□ -0.22
NPHP3-202ENST00000383282 LOC110117498A0A087WWA1 95 aa13.63□□□□□ -0.23
NPHP3-202ENST00000383282 Q6ZQT0 140 aa13.62□□□□□ -0.23
NPHP3-202ENST00000383282 C20orf166-AS1Q96NR2 134 aa13.61□□□□□ -0.23
NPHP3-202ENST00000383282 C21orf62-AS1Q17RA5 79 aa13.6□□□□□ -0.23
NPHP3-202ENST00000383282 A8MUU9 505 aa13.55□□□□□ -0.24
NPHP3-202ENST00000383282 SMCPP49901 116 aaPredicted RBP13.55□□□□□ -0.24
NPHP3-202ENST00000383282 PRO0461Q9UI25 63 aa13.55□□□□□ -0.24
NPHP3-202ENST00000383282 A0A1B0GW54 56 aa13.52□□□□□ -0.25
NPHP3-202ENST00000383282 SIGMAR1Q99720 223 aa13.51□□□□□ -0.25
NPHP3-202ENST00000383282 F8W1H4 67 aa13.49□□□□□ -0.25
NPHP3-202ENST00000383282 IGKV4-1P06312 121 aa13.47□□□□□ -0.25
NPHP3-202ENST00000383282 DSCR10P59022 87 aa13.45□□□□□ -0.26
NPHP3-202ENST00000383282 DEFB116Q30KQ4 102 aa13.43□□□□□ -0.26
NPHP3-202ENST00000383282 LINC00472Q9H8W2 130 aa13.43□□□□□ -0.26
NPHP3-202ENST00000383282 KRTAP9-8Q9BYQ0 159 aa13.42□□□□□ -0.26
NPHP3-202ENST00000383282 J3KT08 172 aa13.37□□□□□ -0.27
NPHP3-202ENST00000383282 LINC00313P59037 77 aa13.37□□□□□ -0.27
NPHP3-202ENST00000383282 NREPQ16612 68 aa13.37□□□□□ -0.27
NPHP3-202ENST00000383282 FAM236DA0A1B0GTK5 79 aa13.35□□□□□ -0.27
NPHP3-202ENST00000383282 FAM236CP0DP71 79 aa13.35□□□□□ -0.27
NPHP3-202ENST00000383282 ETDBQ3ZM63 59 aa13.35□□□□□ -0.27
NPHP3-202ENST00000383282 A0A1B0GV90 55 aa13.34□□□□□ -0.27
NPHP3-202ENST00000383282 USH2AO75445 5202 aa13.28□□□□□ -0.28
NPHP3-202ENST00000383282 IGHV6-1A0A0B4J1U7 121 aa13.28□□□□□ -0.28
NPHP3-202ENST00000383282 NDUFB1O75438 58 aa13.28□□□□□ -0.28
NPHP3-202ENST00000383282 RBM12B-AS1Q9P1G2 102 aa13.28□□□□□ -0.28
NPHP3-202ENST00000383282 SSPOA2VEC9 5147 aa13.26□□□□□ -0.29
NPHP3-202ENST00000383282 KRTAP16-1A8MUX0 517 aa13.26□□□□□ -0.29
NPHP3-202ENST00000383282 KRTAP9-1A8MXZ3 250 aaPredicted RBP13.26□□□□□ -0.29
NPHP3-202ENST00000383282 A0A1B0GVX0 72 aa13.25□□□□□ -0.29
NPHP3-202ENST00000383282 KRTAP9-7A8MTY7 169 aa13.22□□□□□ -0.29
NPHP3-202ENST00000383282 C8orf87E5RJ46 101 aa13.21□□□□□ -0.29
NPHP3-202ENST00000383282 Q6ZVQ6 151 aa13.21□□□□□ -0.29
NPHP3-202ENST00000383282 A8MWP4 228 aa13.2□□□□□ -0.3
NPHP3-202ENST00000383282 MT2AP02795 61 aa13.2□□□□□ -0.3
NPHP3-202ENST00000383282 UBL5Q9BZL1 73 aa13.2□□□□□ -0.3
NPHP3-202ENST00000383282 NOTCH2NLQ7Z3S9 236 aa13.19□□□□□ -0.3
NPHP3-202ENST00000383282 BPY2O14599 106 aa13.18□□□□□ -0.3
NPHP3-202ENST00000383282 HRES1P13985 223 aa13.18□□□□□ -0.3
NPHP3-202ENST00000383282 MPLKIPQ8TAP9 179 aa13.17□□□□□ -0.3
NPHP3-202ENST00000383282 LINC00846Q9NV44 126 aa13.17□□□□□ -0.3
NPHP3-202ENST00000383282 IGKV3D-7A0A0C4DH55 119 aa13.13□□□□□ -0.31
NPHP3-202ENST00000383282 MT1FP04733 61 aa13.1□□□□□ -0.31
NPHP3-202ENST00000383282 PRR15Q8IV56 129 aa13.1□□□□□ -0.31
NPHP3-202ENST00000383282 C8orf17Q9NRJ1 99 aa13.09□□□□□ -0.31
NPHP3-202ENST00000383282 KRTAP10-10P60014 251 aa13.08□□□□□ -0.32
NPHP3-202ENST00000383282 K7EQZ3 153 aa13.05□□□□□ -0.32
NPHP3-202ENST00000383282 ACYP1P07311 99 aa13.04□□□□□ -0.32
NPHP3-202ENST00000383282 LCE2BO14633 110 aa13.02□□□□□ -0.33
NPHP3-202ENST00000383282 KRTAP9-3Q9BYQ3 159 aa13.01□□□□□ -0.33
NPHP3-202ENST00000383282 FCGBPQ9Y6R7 5405 aaPredicted RBP12.99□□□□□ -0.33
NPHP3-202ENST00000383282 FAM240AA0A1B0GVK7 77 aa12.99□□□□□ -0.33
NPHP3-202ENST00000383282 KRTAP19-1Q8IUB9 90 aa12.98□□□□□ -0.33
NPHP3-202ENST00000383282 Q8N9L7 120 aa12.98□□□□□ -0.33
NPHP3-202ENST00000383282 ZCCHC13Q8WW36 166 aaKnown RBP12.97□□□□□ -0.33
NPHP3-202ENST00000383282 MMP24-AS1A0A0U1RRL7 71 aa12.96□□□□□ -0.33
NPHP3-202ENST00000383282 hDV103S1A0JD37 113 aa12.93□□□□□ -0.34
NPHP3-202ENST00000383282 SPINK7P58062 85 aa12.92□□□□□ -0.34
NPHP3-202ENST00000383282 TMEM254Q8TBM7 123 aa12.92□□□□□ -0.34
NPHP3-202ENST00000383282 CXCL6P80162 114 aa12.91□□□□□ -0.34
NPHP3-202ENST00000383282 MRPL34Q9BQ48 92 aaKnown RBP12.9□□□□□ -0.34
NPHP3-202ENST00000383282 Q8N9P0 234 aaPredicted RBP12.89□□□□□ -0.35
NPHP3-202ENST00000383282 J3QR89 54 aa12.88□□□□□ -0.35
NPHP3-202ENST00000383282 WFDC13Q8IUB5 93 aa12.88□□□□□ -0.35
NPHP3-202ENST00000383282 CASC2Q6XLA1 102 aa12.86□□□□□ -0.35
NPHP3-202ENST00000383282 NDUFS5O43920 106 aa12.85□□□□□ -0.35
NPHP3-202ENST00000383282 ATP5EP2Q5VTU8 51 aa12.82□□□□□ -0.36
NPHP3-202ENST00000383282 HCG22E2RYF7 251 aa12.81□□□□□ -0.36
NPHP3-202ENST00000383282 LINC00643Q86TS7 51 aa12.75□□□□□ -0.37
NPHP3-202ENST00000383282 MACF1Q9UPN3 7388 aaKnown RBP12.71□□□□□ -0.37
NPHP3-202ENST00000383282 HIST1H4AP62805 103 aaKnown RBP12.7□□□□□ -0.38
NPHP3-202ENST00000383282 KRTAP19-6Q3LI70 58 aa12.66□□□□□ -0.38
NPHP3-202ENST00000383282 SYNE2Q8WXH0 6885 aaKnown RBP12.63□□□□□ -0.39
NPHP3-202ENST00000383282 K7ERU9 68 aa12.62□□□□□ -0.39
NPHP3-202ENST00000383282 TP53AIP1Q9HCN2 124 aa12.54□□□□□ -0.4
NPHP3-202ENST00000383282 Q5W150 140 aa12.53□□□□□ -0.4
NPHP3-202ENST00000383282 A0A087WVE0 104 aa12.51□□□□□ -0.41
NPHP3-202ENST00000383282 H1FX-AS1Q4G0G2 97 aa12.51□□□□□ -0.41
NPHP3-202ENST00000383282 IGKV2D-30A0A075B6S6 120 aa12.48□□□□□ -0.41
NPHP3-202ENST00000383282 IGKV2-30P06310 120 aa12.48□□□□□ -0.41
NPHP3-202ENST00000383282 C7orf65Q6ZTY9 151 aa12.46□□□□□ -0.41
NPHP3-202ENST00000383282 TRAV22A0A0B4J277 110 aa12.34□□□□□ -0.43
NPHP3-202ENST00000383282 UQCRQO14949 82 aa12.33□□□□□ -0.44
NPHP3-202ENST00000383282 MT-ATP8P03928 68 aa12.31□□□□□ -0.44
NPHP3-202ENST00000383282 IMUPQ9GZP8 106 aa12.3□□□□□ -0.44
NPHP3-202ENST00000383282 KRTAP6-3Q3LI67 103 aa12.29□□□□□ -0.44
NPHP3-202ENST00000383282 SCGB1A1P11684 91 aa12.27□□□□□ -0.45
NPHP3-202ENST00000383282 H0Y9P7 68 aa12.24□□□□□ -0.45
NPHP3-202ENST00000383282 ATOX1O00244 68 aa12.23□□□□□ -0.45
NPHP3-202ENST00000383282 LOC101927531A0A1B0GV80 90 aa12.21□□□□□ -0.45
NPHP3-202ENST00000383282 OCR1Q9BZK8 76 aa12.19□□□□□ -0.46
NPHP3-202ENST00000383282 C4orf26Q17RF5 130 aa12.17□□□□□ -0.46
NPHP3-202ENST00000383282 MP68P56378 58 aa12.15□□□□□ -0.46
NPHP3-202ENST00000383282 CYP4F30PQ9H0H9 118 aa12.15□□□□□ -0.46
NPHP3-202ENST00000383282 FAM236AA0A1B0GUQ0 79 aa12.12□□□□□ -0.47
NPHP3-202ENST00000383282 FAM236BA0A1B0GV22 79 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms