RNA–Protein interactions for RNA: ENST00000379236.3

TNFRSF4-201, Transcript of TNF receptor superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF4, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-201ENST00000379236 FAM236CP0DP71 79 aa12.58□□□□□ -0.4
TNFRSF4-201ENST00000379236 NAA38Q9BRA0 125 aaKnown RBP12.58□□□□□ -0.4
TNFRSF4-201ENST00000379236 J3KT08 172 aa12.57□□□□□ -0.4
TNFRSF4-201ENST00000379236 JMJD7-PLA2G4BH0Y9G9 81 aa12.56□□□□□ -0.4
TNFRSF4-201ENST00000379236 SMIM6P0DI80 62 aa12.53□□□□□ -0.4
TNFRSF4-201ENST00000379236 LYRM7Q5U5X0 104 aa12.52□□□□□ -0.41
TNFRSF4-201ENST00000379236 Q6ZQT0 140 aa12.52□□□□□ -0.41
TNFRSF4-201ENST00000379236 RBM12B-AS1Q9P1G2 102 aa12.52□□□□□ -0.41
TNFRSF4-201ENST00000379236 NDUFB1O75438 58 aa12.51□□□□□ -0.41
TNFRSF4-201ENST00000379236 PDE6GP18545 87 aa12.46□□□□□ -0.41
TNFRSF4-201ENST00000379236 LOC110117498A0A087WWA1 95 aa12.45□□□□□ -0.42
TNFRSF4-201ENST00000379236 A0A1B0GW54 56 aa12.45□□□□□ -0.42
TNFRSF4-201ENST00000379236 TSTD3H0UI37 97 aa12.45□□□□□ -0.42
TNFRSF4-201ENST00000379236 BATFQ16520 125 aa12.44□□□□□ -0.42
TNFRSF4-201ENST00000379236 C14orf132Q9NPU4 83 aa12.42□□□□□ -0.42
TNFRSF4-201ENST00000379236 HRES1P13985 223 aa12.41□□□□□ -0.42
TNFRSF4-201ENST00000379236 ZCCHC13Q8WW36 166 aaKnown RBP12.4□□□□□ -0.42
TNFRSF4-201ENST00000379236 A8MWP4 228 aa12.38□□□□□ -0.43
TNFRSF4-201ENST00000379236 MTURNQ8N3F0 131 aa12.37□□□□□ -0.43
TNFRSF4-201ENST00000379236 MPLKIPQ8TAP9 179 aa12.35□□□□□ -0.43
TNFRSF4-201ENST00000379236 C8orf17Q9NRJ1 99 aa12.35□□□□□ -0.43
TNFRSF4-201ENST00000379236 NREPQ16612 68 aa12.33□□□□□ -0.44
TNFRSF4-201ENST00000379236 Q8N9P0 234 aaPredicted RBP12.32□□□□□ -0.44
TNFRSF4-201ENST00000379236 IGKV3D-7A0A0C4DH55 119 aa12.3□□□□□ -0.44
TNFRSF4-201ENST00000379236 KRTAP9-8Q9BYQ0 159 aa12.3□□□□□ -0.44
TNFRSF4-201ENST00000379236 SPINK7P58062 85 aa12.29□□□□□ -0.44
TNFRSF4-201ENST00000379236 Q6ZVQ6 151 aa12.26□□□□□ -0.45
TNFRSF4-201ENST00000379236 C9orf118A6NHY6 69 aa12.25□□□□□ -0.45
TNFRSF4-201ENST00000379236 H3BT86 120 aa12.24□□□□□ -0.45
TNFRSF4-201ENST00000379236 PRR15Q8IV56 129 aa12.23□□□□□ -0.45
TNFRSF4-201ENST00000379236 A0A1W2PPM0 123 aa12.21□□□□□ -0.45
TNFRSF4-201ENST00000379236 TAX1BP3O14907 124 aa12.17□□□□□ -0.46
TNFRSF4-201ENST00000379236 TMEM254Q8TBM7 123 aa12.17□□□□□ -0.46
TNFRSF4-201ENST00000379236 MRPL34Q9BQ48 92 aaKnown RBP12.16□□□□□ -0.46
TNFRSF4-201ENST00000379236 MT2AP02795 61 aa12.15□□□□□ -0.46
TNFRSF4-201ENST00000379236 WFDC13Q8IUB5 93 aa12.15□□□□□ -0.46
TNFRSF4-201ENST00000379236 MMP24-AS1A0A0U1RRL7 71 aa12.14□□□□□ -0.47
TNFRSF4-201ENST00000379236 LOC105371267A0A1B0GV96 52 aa12.13□□□□□ -0.47
TNFRSF4-201ENST00000379236 NDUFS5O43920 106 aa12.13□□□□□ -0.47
TNFRSF4-201ENST00000379236 K7EQZ3 153 aa12.12□□□□□ -0.47
TNFRSF4-201ENST00000379236 hDV103S1A0JD37 113 aa12.11□□□□□ -0.47
TNFRSF4-201ENST00000379236 BPY2O14599 106 aa12.1□□□□□ -0.47
TNFRSF4-201ENST00000379236 KRTAP10-10P60014 251 aa12.08□□□□□ -0.48
TNFRSF4-201ENST00000379236 SPCS1Q9Y6A9 102 aa12.06□□□□□ -0.48
TNFRSF4-201ENST00000379236 MT1FP04733 61 aa12.05□□□□□ -0.48
TNFRSF4-201ENST00000379236 USH2AO75445 5202 aa12.02□□□□□ -0.49
TNFRSF4-201ENST00000379236 IGKV2D-30A0A075B6S6 120 aa11.93□□□□□ -0.5
TNFRSF4-201ENST00000379236 IGKV2-30P06310 120 aa11.93□□□□□ -0.5
TNFRSF4-201ENST00000379236 CASC2Q6XLA1 102 aa11.93□□□□□ -0.5
TNFRSF4-201ENST00000379236 SSPOA2VEC9 5147 aa11.93□□□□□ -0.5
TNFRSF4-201ENST00000379236 Q8N9L7 120 aa11.92□□□□□ -0.5
TNFRSF4-201ENST00000379236 COL5A1-AS1Q5SY13 56 aa11.91□□□□□ -0.5
TNFRSF4-201ENST00000379236 KRTAP9-3Q9BYQ3 159 aa11.91□□□□□ -0.5
TNFRSF4-201ENST00000379236 C7orf65Q6ZTY9 151 aa11.9□□□□□ -0.5
TNFRSF4-201ENST00000379236 SMCPP49901 116 aaPredicted RBP11.89□□□□□ -0.51
TNFRSF4-201ENST00000379236 HCG22E2RYF7 251 aa11.87□□□□□ -0.51
TNFRSF4-201ENST00000379236 LCE2BO14633 110 aa11.87□□□□□ -0.51
TNFRSF4-201ENST00000379236 H1FX-AS1Q4G0G2 97 aa11.87□□□□□ -0.51
TNFRSF4-201ENST00000379236 UBL5Q9BZL1 73 aa11.87□□□□□ -0.51
TNFRSF4-201ENST00000379236 Q5W150 140 aa11.84□□□□□ -0.51
TNFRSF4-201ENST00000379236 K7EP34 96 aa11.81□□□□□ -0.52
TNFRSF4-201ENST00000379236 CXCL6P80162 114 aa11.8□□□□□ -0.52
TNFRSF4-201ENST00000379236 LINC00846Q9NV44 126 aa11.8□□□□□ -0.52
TNFRSF4-201ENST00000379236 PRO0461Q9UI25 63 aa11.78□□□□□ -0.52
TNFRSF4-201ENST00000379236 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.75□□□□□ -0.53
TNFRSF4-201ENST00000379236 KRTAP19-1Q8IUB9 90 aa11.74□□□□□ -0.53
TNFRSF4-201ENST00000379236 GTF2H5Q6ZYL4 71 aa11.72□□□□□ -0.53
TNFRSF4-201ENST00000379236 C4orf26Q17RF5 130 aa11.69□□□□□ -0.54
TNFRSF4-201ENST00000379236 FCGBPQ9Y6R7 5405 aaPredicted RBP11.65□□□□□ -0.54
TNFRSF4-201ENST00000379236 KRTAP9-7A8MTY7 169 aa11.63□□□□□ -0.55
TNFRSF4-201ENST00000379236 F8W1H4 67 aa11.61□□□□□ -0.55
TNFRSF4-201ENST00000379236 PCP4L1A6NKN8 68 aa11.57□□□□□ -0.56
TNFRSF4-201ENST00000379236 TP53AIP1Q9HCN2 124 aa11.57□□□□□ -0.56
TNFRSF4-201ENST00000379236 ETDBQ3ZM63 59 aa11.56□□□□□ -0.56
TNFRSF4-201ENST00000379236 C5orf47Q569G3 176 aa11.5□□□□□ -0.57
TNFRSF4-201ENST00000379236 KRTAP19-6Q3LI70 58 aa11.49□□□□□ -0.57
TNFRSF4-201ENST00000379236 S4R3F8 94 aa11.49□□□□□ -0.57
TNFRSF4-201ENST00000379236 C1orf64Q8NEQ6 169 aa11.48□□□□□ -0.57
TNFRSF4-201ENST00000379236 FAM236AA0A1B0GUQ0 79 aa11.44□□□□□ -0.58
TNFRSF4-201ENST00000379236 FAM236BA0A1B0GV22 79 aa11.44□□□□□ -0.58
TNFRSF4-201ENST00000379236 KRTAP3-1Q9BYR8 98 aa11.4□□□□□ -0.58
TNFRSF4-201ENST00000379236 CSAG1Q6PB30 78 aa11.39□□□□□ -0.59
TNFRSF4-201ENST00000379236 MACF1Q9UPN3 7388 aaKnown RBP11.35□□□□□ -0.59
TNFRSF4-201ENST00000379236 ACYP1P07311 99 aa11.35□□□□□ -0.59
TNFRSF4-201ENST00000379236 LCA10Q71F78 164 aa11.35□□□□□ -0.59
TNFRSF4-201ENST00000379236 TRAV22A0A0B4J277 110 aa11.3□□□□□ -0.6
TNFRSF4-201ENST00000379236 CYP4F30PQ9H0H9 118 aa11.29□□□□□ -0.6
TNFRSF4-201ENST00000379236 ATP5EP2Q5VTU8 51 aa11.27□□□□□ -0.61
TNFRSF4-201ENST00000379236 LOC101927531A0A1B0GV80 90 aa11.26□□□□□ -0.61
TNFRSF4-201ENST00000379236 HIST1H4AP62805 103 aaKnown RBP11.26□□□□□ -0.61
TNFRSF4-201ENST00000379236 SYNE2Q8WXH0 6885 aaKnown RBP11.26□□□□□ -0.61
TNFRSF4-201ENST00000379236 FAM240AA0A1B0GVK7 77 aa11.24□□□□□ -0.61
TNFRSF4-201ENST00000379236 UQCRQO14949 82 aa11.16□□□□□ -0.62
TNFRSF4-201ENST00000379236 ATOX1O00244 68 aa11.14□□□□□ -0.63
TNFRSF4-201ENST00000379236 Q5VV11 94 aa11.14□□□□□ -0.63
TNFRSF4-201ENST00000379236 H0Y9P7 68 aa11.13□□□□□ -0.63
TNFRSF4-201ENST00000379236 KLKP1Q107X0 134 aa11.11□□□□□ -0.63
TNFRSF4-201ENST00000379236 KRTAP3-3Q9BYR6 98 aa11.1□□□□□ -0.63
TNFRSF4-201ENST00000379236 SPRR2GQ9BYE4 73 aa11.09□□□□□ -0.63
TNFRSF4-201ENST00000379236 A0A087WVE0 104 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 141.1 ms