RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 FLGP20930 4061 aaPredicted RBP8.71□□□□□ -1.02
HMGN4-201ENST00000377575 KRTAP16-1A8MUX0 517 aa8.7□□□□□ -1.02
HMGN4-201ENST00000377575 JMJD7-PLA2G4BH0Y9G9 81 aa8.7□□□□□ -1.02
HMGN4-201ENST00000377575 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.69□□□□□ -1.02
HMGN4-201ENST00000377575 C8orf87E5RJ46 101 aa8.68□□□□□ -1.02
HMGN4-201ENST00000377575 TRBV20-1A0A075B6N2 111 aa8.67□□□□□ -1.02
HMGN4-201ENST00000377575 A0A1B0GVX0 72 aa8.67□□□□□ -1.02
HMGN4-201ENST00000377575 J3KT08 172 aa8.67□□□□□ -1.02
HMGN4-201ENST00000377575 KRTAP10-6P60371 365 aaPredicted RBP8.67□□□□□ -1.02
HMGN4-201ENST00000377575 BATFQ16520 125 aa8.67□□□□□ -1.02
HMGN4-201ENST00000377575 NOTCH2NLQ7Z3S9 236 aa8.67□□□□□ -1.02
HMGN4-201ENST00000377575 Q6ZQT0 140 aa8.66□□□□□ -1.02
HMGN4-201ENST00000377575 LOC110117498A0A087WWA1 95 aa8.65□□□□□ -1.02
HMGN4-201ENST00000377575 KRTAP9-6A0A140TA67 174 aa8.65□□□□□ -1.02
HMGN4-201ENST00000377575 A0A1B0GW54 56 aa8.65□□□□□ -1.02
HMGN4-201ENST00000377575 PDE6GP18545 87 aa8.65□□□□□ -1.02
HMGN4-201ENST00000377575 KRTAP4-12Q9BQ66 201 aa8.65□□□□□ -1.02
HMGN4-201ENST00000377575 C14orf132Q9NPU4 83 aa8.61□□□□□ -1.03
HMGN4-201ENST00000377575 NDUFB1O75438 58 aa8.6□□□□□ -1.03
HMGN4-201ENST00000377575 LOC105371267A0A1B0GV96 52 aa8.59□□□□□ -1.03
HMGN4-201ENST00000377575 C9orf118A6NHY6 69 aa8.56□□□□□ -1.04
HMGN4-201ENST00000377575 A8MWP4 228 aa8.55□□□□□ -1.04
HMGN4-201ENST00000377575 KRTAP19-1Q8IUB9 90 aa8.55□□□□□ -1.04
HMGN4-201ENST00000377575 H3BT86 120 aa8.54□□□□□ -1.04
HMGN4-201ENST00000377575 FAM236DA0A1B0GTK5 79 aa8.53□□□□□ -1.04
HMGN4-201ENST00000377575 A0A1W2PPM0 123 aa8.53□□□□□ -1.04
HMGN4-201ENST00000377575 TAX1BP3O14907 124 aa8.53□□□□□ -1.04
HMGN4-201ENST00000377575 FAM236CP0DP71 79 aa8.53□□□□□ -1.04
HMGN4-201ENST00000377575 RBM12B-AS1Q9P1G2 102 aa8.53□□□□□ -1.04
HMGN4-201ENST00000377575 NREPQ16612 68 aa8.51□□□□□ -1.05
HMGN4-201ENST00000377575 ZCCHC13Q8WW36 166 aaKnown RBP8.51□□□□□ -1.05
HMGN4-201ENST00000377575 C8orf17Q9NRJ1 99 aa8.51□□□□□ -1.05
HMGN4-201ENST00000377575 IGKV3D-7A0A0C4DH55 119 aa8.49□□□□□ -1.05
HMGN4-201ENST00000377575 HRES1P13985 223 aa8.49□□□□□ -1.05
HMGN4-201ENST00000377575 Q8N9P0 234 aaPredicted RBP8.49□□□□□ -1.05
HMGN4-201ENST00000377575 MTURNQ8N3F0 131 aa8.47□□□□□ -1.05
HMGN4-201ENST00000377575 MPLKIPQ8TAP9 179 aa8.47□□□□□ -1.05
HMGN4-201ENST00000377575 PRR15Q8IV56 129 aa8.46□□□□□ -1.06
HMGN4-201ENST00000377575 CRCT1Q9UGL9 99 aa8.46□□□□□ -1.06
HMGN4-201ENST00000377575 Q6ZVQ6 151 aa8.45□□□□□ -1.06
HMGN4-201ENST00000377575 LCE3BQ5TA77 95 aa8.44□□□□□ -1.06
HMGN4-201ENST00000377575 FSIP2Q5CZC0 6907 aa8.43□□□□□ -1.06
HMGN4-201ENST00000377575 SPCS1Q9Y6A9 102 aa8.42□□□□□ -1.06
HMGN4-201ENST00000377575 SPINK7P58062 85 aa8.41□□□□□ -1.06
HMGN4-201ENST00000377575 MMP24-AS1A0A0U1RRL7 71 aa8.39□□□□□ -1.07
HMGN4-201ENST00000377575 TMEM254Q8TBM7 123 aa8.39□□□□□ -1.07
HMGN4-201ENST00000377575 MRPL34Q9BQ48 92 aaKnown RBP8.38□□□□□ -1.07
HMGN4-201ENST00000377575 K7EQZ3 153 aa8.37□□□□□ -1.07
HMGN4-201ENST00000377575 COL5A1-AS1Q5SY13 56 aa8.37□□□□□ -1.07
HMGN4-201ENST00000377575 BPY2O14599 106 aa8.36□□□□□ -1.07
HMGN4-201ENST00000377575 hDV103S1A0JD37 113 aa8.35□□□□□ -1.07
HMGN4-201ENST00000377575 H3BS24 57 aa8.35□□□□□ -1.07
HMGN4-201ENST00000377575 KRTAP9-8Q9BYQ0 159 aa8.35□□□□□ -1.07
HMGN4-201ENST00000377575 WFDC13Q8IUB5 93 aa8.32□□□□□ -1.08
HMGN4-201ENST00000377575 NDUFS5O43920 106 aa8.31□□□□□ -1.08
HMGN4-201ENST00000377575 KRTAP9-9Q9BYP9 154 aa8.29□□□□□ -1.08
HMGN4-201ENST00000377575 KRTAP9-4Q9BYQ2 154 aa8.29□□□□□ -1.08
HMGN4-201ENST00000377575 K7EP34 96 aa8.28□□□□□ -1.08
HMGN4-201ENST00000377575 PRO0461Q9UI25 63 aa8.26□□□□□ -1.09
HMGN4-201ENST00000377575 MT2AP02795 61 aa8.25□□□□□ -1.09
HMGN4-201ENST00000377575 Q8N9L7 120 aa8.24□□□□□ -1.09
HMGN4-201ENST00000377575 UBL5Q9BZL1 73 aa8.24□□□□□ -1.09
HMGN4-201ENST00000377575 CASC2Q6XLA1 102 aa8.23□□□□□ -1.09
HMGN4-201ENST00000377575 GTF2H5Q6ZYL4 71 aa8.21□□□□□ -1.1
HMGN4-201ENST00000377575 LINC00846Q9NV44 126 aa8.2□□□□□ -1.1
HMGN4-201ENST00000377575 MT1FP04733 61 aa8.19□□□□□ -1.1
HMGN4-201ENST00000377575 IGKV2D-30A0A075B6S6 120 aa8.18□□□□□ -1.1
HMGN4-201ENST00000377575 HCG22E2RYF7 251 aa8.18□□□□□ -1.1
HMGN4-201ENST00000377575 IGKV2-30P06310 120 aa8.18□□□□□ -1.1
HMGN4-201ENST00000377575 KRTAP10-10P60014 251 aa8.18□□□□□ -1.1
HMGN4-201ENST00000377575 C7orf65Q6ZTY9 151 aa8.18□□□□□ -1.1
HMGN4-201ENST00000377575 CXCL6P80162 114 aa8.15□□□□□ -1.1
HMGN4-201ENST00000377575 Q5W150 140 aa8.15□□□□□ -1.1
HMGN4-201ENST00000377575 PCP4L1A6NKN8 68 aa8.14□□□□□ -1.11
HMGN4-201ENST00000377575 F8W1H4 67 aa8.13□□□□□ -1.11
HMGN4-201ENST00000377575 H1FX-AS1Q4G0G2 97 aa8.12□□□□□ -1.11
HMGN4-201ENST00000377575 KRTAP4-8A0A0G2JLE6 195 aa8.11□□□□□ -1.11
HMGN4-201ENST00000377575 KRTAP9-3Q9BYQ3 159 aa8.09□□□□□ -1.11
HMGN4-201ENST00000377575 ETDBQ3ZM63 59 aa8.08□□□□□ -1.12
HMGN4-201ENST00000377575 USH2AO75445 5202 aa8.07□□□□□ -1.12
HMGN4-201ENST00000377575 C4orf26Q17RF5 130 aa8.01□□□□□ -1.13
HMGN4-201ENST00000377575 TP53AIP1Q9HCN2 124 aa8.01□□□□□ -1.13
HMGN4-201ENST00000377575 SSPOA2VEC9 5147 aa7.99□□□□□ -1.13
HMGN4-201ENST00000377575 KRTAP19-4Q3LI73 84 aa7.98□□□□□ -1.13
HMGN4-201ENST00000377575 ACYP1P07311 99 aa7.94□□□□□ -1.14
HMGN4-201ENST00000377575 LCE1DQ5T752 114 aa7.94□□□□□ -1.14
HMGN4-201ENST00000377575 LCE4AQ5TA78 99 aa7.93□□□□□ -1.14
HMGN4-201ENST00000377575 FAM240AA0A1B0GVK7 77 aa7.9□□□□□ -1.14
HMGN4-201ENST00000377575 ATP5EP2Q5VTU8 51 aa7.9□□□□□ -1.14
HMGN4-201ENST00000377575 C1orf64Q8NEQ6 169 aa7.88□□□□□ -1.15
HMGN4-201ENST00000377575 S4R3F8 94 aa7.87□□□□□ -1.15
HMGN4-201ENST00000377575 KRTAP3-1Q9BYR8 98 aa7.85□□□□□ -1.15
HMGN4-201ENST00000377575 TRAV22A0A0B4J277 110 aa7.84□□□□□ -1.15
HMGN4-201ENST00000377575 C5orf47Q569G3 176 aa7.84□□□□□ -1.15
HMGN4-201ENST00000377575 FCGBPQ9Y6R7 5405 aaPredicted RBP7.81□□□□□ -1.16
HMGN4-201ENST00000377575 HIST1H4AP62805 103 aaKnown RBP7.81□□□□□ -1.16
HMGN4-201ENST00000377575 KRTAP4-7Q9BYR0 210 aa7.81□□□□□ -1.16
HMGN4-201ENST00000377575 CYP4F30PQ9H0H9 118 aa7.8□□□□□ -1.16
HMGN4-201ENST00000377575 LOC101927531A0A1B0GV80 90 aa7.79□□□□□ -1.16
HMGN4-201ENST00000377575 KRTAP9-7A8MTY7 169 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms