RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 A0A1B0GV72 72 aa11.38□□□□□ -0.59
C9orf47-202ENST00000375850 A0A1B0GVX0 72 aa11.37□□□□□ -0.59
C9orf47-202ENST00000375850 PSMB2P49721 201 aa11.37□□□□□ -0.59
C9orf47-202ENST00000375850 UBE2V1Q13404 147 aa11.37□□□□□ -0.59
C9orf47-202ENST00000375850 C21orf62-AS1Q17RA5 79 aa11.34□□□□□ -0.59
C9orf47-202ENST00000375850 ZCCHC13Q8WW36 166 aaKnown RBP11.34□□□□□ -0.59
C9orf47-202ENST00000375850 J3KT08 172 aa11.32□□□□□ -0.6
C9orf47-202ENST00000375850 SPINK7P58062 85 aa11.3□□□□□ -0.6
C9orf47-202ENST00000375850 HSD52Q0P140 79 aa11.28□□□□□ -0.6
C9orf47-202ENST00000375850 VPS25Q9BRG1 176 aa11.28□□□□□ -0.6
C9orf47-202ENST00000375850 RBM3P98179 157 aaKnown RBP11.27□□□□□ -0.61
C9orf47-202ENST00000375850 DSCR8Q96T75 97 aa11.27□□□□□ -0.61
C9orf47-202ENST00000375850 A8MWP4 228 aa11.26□□□□□ -0.61
C9orf47-202ENST00000375850 KRTAP19-6Q3LI70 58 aa11.24□□□□□ -0.61
C9orf47-202ENST00000375850 K7ERJ3 54 aa11.23□□□□□ -0.61
C9orf47-202ENST00000375850 NDUFB1O75438 58 aa11.22□□□□□ -0.61
C9orf47-202ENST00000375850 Q8N9P0 234 aaPredicted RBP11.22□□□□□ -0.61
C9orf47-202ENST00000375850 C9JAW5 83 aa11.17□□□□□ -0.62
C9orf47-202ENST00000375850 Q6ZQT0 140 aa11.16□□□□□ -0.62
C9orf47-202ENST00000375850 WFDC13Q8IUB5 93 aa11.15□□□□□ -0.62
C9orf47-202ENST00000375850 SCGB1C2P0DMR2 95 aa11.14□□□□□ -0.63
C9orf47-202ENST00000375850 LYRM7Q5U5X0 104 aa11.14□□□□□ -0.63
C9orf47-202ENST00000375850 MACF1Q9UPN3 7388 aaKnown RBP11.14□□□□□ -0.63
C9orf47-202ENST00000375850 A0A1B0GW54 56 aa11.12□□□□□ -0.63
C9orf47-202ENST00000375850 C8orf17Q9NRJ1 99 aa11.1□□□□□ -0.63
C9orf47-202ENST00000375850 BAALC-AS2P0C853 105 aa11.08□□□□□ -0.64
C9orf47-202ENST00000375850 UQCR10Q9UDW1 63 aa11.05□□□□□ -0.64
C9orf47-202ENST00000375850 PYY3Q5JQD4 70 aa11.04□□□□□ -0.64
C9orf47-202ENST00000375850 TMA7Q9Y2S6 64 aaKnown RBP11.04□□□□□ -0.64
C9orf47-202ENST00000375850 SYNE2Q8WXH0 6885 aaKnown RBP11.04□□□□□ -0.64
C9orf47-202ENST00000375850 JMJD7-PLA2G4BH0Y9G9 81 aa11.03□□□□□ -0.64
C9orf47-202ENST00000375850 Q6ZVQ6 151 aa11.03□□□□□ -0.64
C9orf47-202ENST00000375850 IGKV3D-7A0A0C4DH55 119 aa11.01□□□□□ -0.65
C9orf47-202ENST00000375850 PDE6GP18545 87 aa11.01□□□□□ -0.65
C9orf47-202ENST00000375850 LOC110117498A0A087WWA1 95 aa10.99□□□□□ -0.65
C9orf47-202ENST00000375850 H1FX-AS1Q4G0G2 97 aa10.97□□□□□ -0.65
C9orf47-202ENST00000375850 KRTAP6-3Q3LI67 103 aa10.95□□□□□ -0.66
C9orf47-202ENST00000375850 PRR15Q8IV56 129 aa10.95□□□□□ -0.66
C9orf47-202ENST00000375850 ATXN8Q156A1 80 aa10.93□□□□□ -0.66
C9orf47-202ENST00000375850 TMEM254Q8TBM7 123 aa10.92□□□□□ -0.66
C9orf47-202ENST00000375850 MRPL34Q9BQ48 92 aaKnown RBP10.92□□□□□ -0.66
C9orf47-202ENST00000375850 NREPQ16612 68 aa10.88□□□□□ -0.67
C9orf47-202ENST00000375850 MMP24-AS1A0A0U1RRL7 71 aa10.85□□□□□ -0.67
C9orf47-202ENST00000375850 C14orf132Q9NPU4 83 aa10.83□□□□□ -0.68
C9orf47-202ENST00000375850 hDV103S1A0JD37 113 aa10.82□□□□□ -0.68
C9orf47-202ENST00000375850 NDUFS5O43920 106 aa10.8□□□□□ -0.68
C9orf47-202ENST00000375850 C7orf65Q6ZTY9 151 aa10.78□□□□□ -0.68
C9orf47-202ENST00000375850 M0R143 59 aa10.77□□□□□ -0.69
C9orf47-202ENST00000375850 IGKV2D-30A0A075B6S6 120 aa10.74□□□□□ -0.69
C9orf47-202ENST00000375850 IGKV2-30P06310 120 aa10.74□□□□□ -0.69
C9orf47-202ENST00000375850 K7EQZ3 153 aa10.73□□□□□ -0.69
C9orf47-202ENST00000375850 NAA38Q9BRA0 125 aaKnown RBP10.71□□□□□ -0.69
C9orf47-202ENST00000375850 Q5W150 140 aa10.65□□□□□ -0.7
C9orf47-202ENST00000375850 BPY2O14599 106 aa10.64□□□□□ -0.71
C9orf47-202ENST00000375850 C4orf26Q17RF5 130 aa10.59□□□□□ -0.71
C9orf47-202ENST00000375850 A6NN06 94 aa10.58□□□□□ -0.72
C9orf47-202ENST00000375850 FAM236AA0A1B0GUQ0 79 aa10.57□□□□□ -0.72
C9orf47-202ENST00000375850 FAM236BA0A1B0GV22 79 aa10.57□□□□□ -0.72
C9orf47-202ENST00000375850 H3BT86 120 aa10.57□□□□□ -0.72
C9orf47-202ENST00000375850 CASC2Q6XLA1 102 aa10.57□□□□□ -0.72
C9orf47-202ENST00000375850 CXCL6P80162 114 aa10.56□□□□□ -0.72
C9orf47-202ENST00000375850 HCG22E2RYF7 251 aa10.54□□□□□ -0.72
C9orf47-202ENST00000375850 C5orf47Q569G3 176 aa10.53□□□□□ -0.72
C9orf47-202ENST00000375850 Q5VV11 94 aa10.52□□□□□ -0.73
C9orf47-202ENST00000375850 LOC105371267A0A1B0GV96 52 aa10.49□□□□□ -0.73
C9orf47-202ENST00000375850 SMIM6P0DI80 62 aa10.49□□□□□ -0.73
C9orf47-202ENST00000375850 MT1BP07438 61 aa10.48□□□□□ -0.73
C9orf47-202ENST00000375850 CSAG1Q6PB30 78 aa10.48□□□□□ -0.73
C9orf47-202ENST00000375850 NEBP20929 6669 aa10.47□□□□□ -0.73
C9orf47-202ENST00000375850 SPRR2GQ9BYE4 73 aa10.47□□□□□ -0.73
C9orf47-202ENST00000375850 S4R3F8 94 aa10.47□□□□□ -0.73
C9orf47-202ENST00000375850 KRTAP19-8Q3LI54 63 aa10.46□□□□□ -0.73
C9orf47-202ENST00000375850 Q8N9L7 120 aa10.45□□□□□ -0.74
C9orf47-202ENST00000375850 TSTD3H0UI37 97 aa10.44□□□□□ -0.74
C9orf47-202ENST00000375850 KRTAP3-1Q9BYR8 98 aa10.39□□□□□ -0.75
C9orf47-202ENST00000375850 C9orf118A6NHY6 69 aa10.38□□□□□ -0.75
C9orf47-202ENST00000375850 KRTAP10-5P60370 271 aa10.37□□□□□ -0.75
C9orf47-202ENST00000375850 BATFQ16520 125 aa10.37□□□□□ -0.75
C9orf47-202ENST00000375850 C1orf64Q8NEQ6 169 aa10.37□□□□□ -0.75
C9orf47-202ENST00000375850 A0A1W2PPM0 123 aa10.35□□□□□ -0.75
C9orf47-202ENST00000375850 LCA10Q71F78 164 aa10.35□□□□□ -0.75
C9orf47-202ENST00000375850 MUC12Q9UKN1 5478 aa10.34□□□□□ -0.75
C9orf47-202ENST00000375850 KLKP1Q107X0 134 aa10.32□□□□□ -0.76
C9orf47-202ENST00000375850 KRTAP20-1Q3LI63 56 aa10.31□□□□□ -0.76
C9orf47-202ENST00000375850 UBL5Q9BZL1 73 aa10.3□□□□□ -0.76
C9orf47-202ENST00000375850 KRTAP5-9P26371 169 aa10.29□□□□□ -0.76
C9orf47-202ENST00000375850 TAX1BP3O14907 124 aa10.26□□□□□ -0.77
C9orf47-202ENST00000375850 TP53AIP1Q9HCN2 124 aa10.26□□□□□ -0.77
C9orf47-202ENST00000375850 CRIPTQ9P021 101 aa10.24□□□□□ -0.77
C9orf47-202ENST00000375850 SPCS1Q9Y6A9 102 aa10.17□□□□□ -0.78
C9orf47-202ENST00000375850 IMUPQ9GZP8 106 aa10.16□□□□□ -0.78
C9orf47-202ENST00000375850 SMCPP49901 116 aaPredicted RBP10.14□□□□□ -0.79
C9orf47-202ENST00000375850 KRTAP3-3Q9BYR6 98 aa10.14□□□□□ -0.79
C9orf47-202ENST00000375850 KMT2DO14686 5537 aa10.09□□□□□ -0.79
C9orf47-202ENST00000375850 CYP4F30PQ9H0H9 118 aa10.06□□□□□ -0.8
C9orf47-202ENST00000375850 MDN1Q9NU22 5596 aa10.03□□□□□ -0.8
C9orf47-202ENST00000375850 PRO0461Q9UI25 63 aa10□□□□□ -0.81
C9orf47-202ENST00000375850 H0YAA0 97 aa9.98□□□□□ -0.81
C9orf47-202ENST00000375850 LOC101927531A0A1B0GV80 90 aa9.97□□□□□ -0.81
C9orf47-202ENST00000375850 PCP4L1A6NKN8 68 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms