RNA–Protein interactions for RNA: ENST00000372736.3

COL9A2-201, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 319 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-201ENST00000372736 Q6ZQT0 140 aa11.66□□□□□ -0.54
COL9A2-201ENST00000372736 LOC110117498A0A087WWA1 95 aa11.64□□□□□ -0.55
COL9A2-201ENST00000372736 A0A1B0GVX0 72 aa11.64□□□□□ -0.55
COL9A2-201ENST00000372736 M0R2T5 61 aa11.64□□□□□ -0.55
COL9A2-201ENST00000372736 TRBV20-1A0A075B6N2 111 aa11.62□□□□□ -0.55
COL9A2-201ENST00000372736 C8orf87E5RJ46 101 aa11.61□□□□□ -0.55
COL9A2-201ENST00000372736 J3KT08 172 aa11.6□□□□□ -0.55
COL9A2-201ENST00000372736 C14orf132Q9NPU4 83 aa11.59□□□□□ -0.55
COL9A2-201ENST00000372736 A0A1B0GW54 56 aa11.57□□□□□ -0.56
COL9A2-201ENST00000372736 PDE6GP18545 87 aa11.57□□□□□ -0.56
COL9A2-201ENST00000372736 KRTAP9-6A0A140TA67 174 aa11.56□□□□□ -0.56
COL9A2-201ENST00000372736 C9orf118A6NHY6 69 aa11.55□□□□□ -0.56
COL9A2-201ENST00000372736 TAX1BP3O14907 124 aa11.55□□□□□ -0.56
COL9A2-201ENST00000372736 A0A1W2PPM0 123 aa11.51□□□□□ -0.57
COL9A2-201ENST00000372736 A8MWP4 228 aa11.48□□□□□ -0.57
COL9A2-201ENST00000372736 NDUFB1O75438 58 aa11.48□□□□□ -0.57
COL9A2-201ENST00000372736 H3BT86 120 aa11.47□□□□□ -0.57
COL9A2-201ENST00000372736 MTURNQ8N3F0 131 aa11.47□□□□□ -0.57
COL9A2-201ENST00000372736 IGKV3D-7A0A0C4DH55 119 aa11.45□□□□□ -0.58
COL9A2-201ENST00000372736 HRES1P13985 223 aa11.45□□□□□ -0.58
COL9A2-201ENST00000372736 MPLKIPQ8TAP9 179 aa11.44□□□□□ -0.58
COL9A2-201ENST00000372736 C8orf17Q9NRJ1 99 aa11.44□□□□□ -0.58
COL9A2-201ENST00000372736 ZCCHC13Q8WW36 166 aaKnown RBP11.43□□□□□ -0.58
COL9A2-201ENST00000372736 Q8N9P0 234 aaPredicted RBP11.42□□□□□ -0.58
COL9A2-201ENST00000372736 NREPQ16612 68 aa11.4□□□□□ -0.58
COL9A2-201ENST00000372736 FAM236DA0A1B0GTK5 79 aa11.37□□□□□ -0.59
COL9A2-201ENST00000372736 FAM236CP0DP71 79 aa11.37□□□□□ -0.59
COL9A2-201ENST00000372736 PRR15Q8IV56 129 aa11.37□□□□□ -0.59
COL9A2-201ENST00000372736 RBM12B-AS1Q9P1G2 102 aa11.36□□□□□ -0.59
COL9A2-201ENST00000372736 CRCT1Q9UGL9 99 aa11.35□□□□□ -0.59
COL9A2-201ENST00000372736 SPCS1Q9Y6A9 102 aa11.35□□□□□ -0.59
COL9A2-201ENST00000372736 Q6ZVQ6 151 aa11.34□□□□□ -0.59
COL9A2-201ENST00000372736 FSIP2Q5CZC0 6907 aa11.34□□□□□ -0.59
COL9A2-201ENST00000372736 MMP24-AS1A0A0U1RRL7 71 aa11.31□□□□□ -0.6
COL9A2-201ENST00000372736 SPINK7P58062 85 aa11.3□□□□□ -0.6
COL9A2-201ENST00000372736 KRTAP9-8Q9BYQ0 159 aa11.29□□□□□ -0.6
COL9A2-201ENST00000372736 K7EQZ3 153 aa11.28□□□□□ -0.6
COL9A2-201ENST00000372736 SMCPP49901 116 aaPredicted RBP11.28□□□□□ -0.6
COL9A2-201ENST00000372736 TMEM254Q8TBM7 123 aa11.27□□□□□ -0.61
COL9A2-201ENST00000372736 COL5A1-AS1Q5SY13 56 aa11.26□□□□□ -0.61
COL9A2-201ENST00000372736 MRPL34Q9BQ48 92 aaKnown RBP11.24□□□□□ -0.61
COL9A2-201ENST00000372736 BPY2O14599 106 aa11.21□□□□□ -0.61
COL9A2-201ENST00000372736 PRO0461Q9UI25 63 aa11.21□□□□□ -0.61
COL9A2-201ENST00000372736 hDV103S1A0JD37 113 aa11.2□□□□□ -0.62
COL9A2-201ENST00000372736 K7EP34 96 aa11.18□□□□□ -0.62
COL9A2-201ENST00000372736 WFDC13Q8IUB5 93 aa11.16□□□□□ -0.62
COL9A2-201ENST00000372736 MT2AP02795 61 aa11.14□□□□□ -0.63
COL9A2-201ENST00000372736 Q8N9L7 120 aa11.13□□□□□ -0.63
COL9A2-201ENST00000372736 NDUFS5O43920 106 aa11.11□□□□□ -0.63
COL9A2-201ENST00000372736 LINC00846Q9NV44 126 aa11.07□□□□□ -0.64
COL9A2-201ENST00000372736 MT1FP04733 61 aa11.06□□□□□ -0.64
COL9A2-201ENST00000372736 CASC2Q6XLA1 102 aa11.05□□□□□ -0.64
COL9A2-201ENST00000372736 Q5W150 140 aa11.03□□□□□ -0.64
COL9A2-201ENST00000372736 UBL5Q9BZL1 73 aa11.03□□□□□ -0.64
COL9A2-201ENST00000372736 PCP4L1A6NKN8 68 aa11.01□□□□□ -0.65
COL9A2-201ENST00000372736 GTF2H5Q6ZYL4 71 aa11.01□□□□□ -0.65
COL9A2-201ENST00000372736 HCG22E2RYF7 251 aa10.99□□□□□ -0.65
COL9A2-201ENST00000372736 IGKV2D-30A0A075B6S6 120 aa10.97□□□□□ -0.65
COL9A2-201ENST00000372736 IGKV2-30P06310 120 aa10.97□□□□□ -0.65
COL9A2-201ENST00000372736 KRTAP10-10P60014 251 aa10.96□□□□□ -0.65
COL9A2-201ENST00000372736 C7orf65Q6ZTY9 151 aa10.95□□□□□ -0.66
COL9A2-201ENST00000372736 F8W1H4 67 aa10.94□□□□□ -0.66
COL9A2-201ENST00000372736 KRTAP9-3Q9BYQ3 159 aa10.94□□□□□ -0.66
COL9A2-201ENST00000372736 CXCL6P80162 114 aa10.91□□□□□ -0.66
COL9A2-201ENST00000372736 ETDBQ3ZM63 59 aa10.91□□□□□ -0.66
COL9A2-201ENST00000372736 USH2AO75445 5202 aa10.91□□□□□ -0.66
COL9A2-201ENST00000372736 H1FX-AS1Q4G0G2 97 aa10.89□□□□□ -0.67
COL9A2-201ENST00000372736 LCE2BO14633 110 aa10.87□□□□□ -0.67
COL9A2-201ENST00000372736 SSPOA2VEC9 5147 aa10.81□□□□□ -0.68
COL9A2-201ENST00000372736 C4orf26Q17RF5 130 aa10.78□□□□□ -0.68
COL9A2-201ENST00000372736 TP53AIP1Q9HCN2 124 aa10.7□□□□□ -0.7
COL9A2-201ENST00000372736 KRTAP3-1Q9BYR8 98 aa10.65□□□□□ -0.7
COL9A2-201ENST00000372736 ACYP1P07311 99 aa10.64□□□□□ -0.71
COL9A2-201ENST00000372736 KRTAP19-1Q8IUB9 90 aa10.64□□□□□ -0.71
COL9A2-201ENST00000372736 FAM240AA0A1B0GVK7 77 aa10.63□□□□□ -0.71
COL9A2-201ENST00000372736 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.58□□□□□ -0.72
COL9A2-201ENST00000372736 ATP5EP2Q5VTU8 51 aa10.57□□□□□ -0.72
COL9A2-201ENST00000372736 C1orf64Q8NEQ6 169 aa10.57□□□□□ -0.72
COL9A2-201ENST00000372736 FCGBPQ9Y6R7 5405 aaPredicted RBP10.55□□□□□ -0.72
COL9A2-201ENST00000372736 C5orf47Q569G3 176 aa10.53□□□□□ -0.72
COL9A2-201ENST00000372736 S4R3F8 94 aa10.53□□□□□ -0.72
COL9A2-201ENST00000372736 TRAV22A0A0B4J277 110 aa10.5□□□□□ -0.73
COL9A2-201ENST00000372736 CYP4F30PQ9H0H9 118 aa10.5□□□□□ -0.73
COL9A2-201ENST00000372736 KRTAP19-6Q3LI70 58 aa10.48□□□□□ -0.73
COL9A2-201ENST00000372736 LCA10Q71F78 164 aa10.48□□□□□ -0.73
COL9A2-201ENST00000372736 HIST1H4AP62805 103 aaKnown RBP10.47□□□□□ -0.73
COL9A2-201ENST00000372736 LOC101927531A0A1B0GV80 90 aa10.43□□□□□ -0.74
COL9A2-201ENST00000372736 A0A1B0GV90 55 aa10.43□□□□□ -0.74
COL9A2-201ENST00000372736 CSAG1Q6PB30 78 aa10.42□□□□□ -0.74
COL9A2-201ENST00000372736 KRTAP9-7A8MTY7 169 aa10.41□□□□□ -0.74
COL9A2-201ENST00000372736 LINC00643Q86TS7 51 aa10.4□□□□□ -0.74
COL9A2-201ENST00000372736 UQCRQO14949 82 aa10.39□□□□□ -0.75
COL9A2-201ENST00000372736 A0A087WVE0 104 aa10.38□□□□□ -0.75
COL9A2-201ENST00000372736 FAM236AA0A1B0GUQ0 79 aa10.37□□□□□ -0.75
COL9A2-201ENST00000372736 FAM236BA0A1B0GV22 79 aa10.37□□□□□ -0.75
COL9A2-201ENST00000372736 H0Y9P7 68 aa10.35□□□□□ -0.75
COL9A2-201ENST00000372736 KRTAP3-3Q9BYR6 98 aa10.35□□□□□ -0.75
COL9A2-201ENST00000372736 ATOX1O00244 68 aa10.32□□□□□ -0.76
COL9A2-201ENST00000372736 SPRR2GQ9BYE4 73 aa10.22□□□□□ -0.77
COL9A2-201ENST00000372736 OCR1Q9BZK8 76 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 146.7 ms