RNA–Protein interactions for RNA: ENST00000368687.1

CHTOP-202, Transcript of chromatin target of PRMT1, humanhuman

TSL 1 (best) BASIC

Gene CHTOP, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-202ENST00000368687 DSCR10P59022 87 aa9.81□□□□□ -0.84
CHTOP-202ENST00000368687 SPCS1Q9Y6A9 102 aa9.8□□□□□ -0.84
CHTOP-202ENST00000368687 C8orf87E5RJ46 101 aa9.79□□□□□ -0.84
CHTOP-202ENST00000368687 DEFB116Q30KQ4 102 aa9.79□□□□□ -0.84
CHTOP-202ENST00000368687 IGHV6-1A0A0B4J1U7 121 aa9.77□□□□□ -0.85
CHTOP-202ENST00000368687 A0A1B0GVX0 72 aa9.77□□□□□ -0.85
CHTOP-202ENST00000368687 NDUFB1O75438 58 aa9.77□□□□□ -0.85
CHTOP-202ENST00000368687 KRTAP9-2Q9BYQ4 174 aa9.77□□□□□ -0.85
CHTOP-202ENST00000368687 KRTAP16-1A8MUX0 517 aa9.72□□□□□ -0.85
CHTOP-202ENST00000368687 MTURNQ8N3F0 131 aa9.72□□□□□ -0.85
CHTOP-202ENST00000368687 NREPQ16612 68 aa9.71□□□□□ -0.86
CHTOP-202ENST00000368687 A8MWP4 228 aa9.7□□□□□ -0.86
CHTOP-202ENST00000368687 LCE2CQ5TA81 110 aa9.69□□□□□ -0.86
CHTOP-202ENST00000368687 LCE2BO14633 110 aa9.68□□□□□ -0.86
CHTOP-202ENST00000368687 KRTAP19-2Q3LHN2 52 aa9.68□□□□□ -0.86
CHTOP-202ENST00000368687 NOTCH2NLQ7Z3S9 236 aa9.68□□□□□ -0.86
CHTOP-202ENST00000368687 K7EP34 96 aa9.67□□□□□ -0.86
CHTOP-202ENST00000368687 COX6B2Q6YFQ2 88 aa9.65□□□□□ -0.86
CHTOP-202ENST00000368687 GTF2H5Q6ZYL4 71 aa9.65□□□□□ -0.86
CHTOP-202ENST00000368687 PCP4L1A6NKN8 68 aa9.64□□□□□ -0.87
CHTOP-202ENST00000368687 IGKV3D-7A0A0C4DH55 119 aa9.6□□□□□ -0.87
CHTOP-202ENST00000368687 SMCPP49901 116 aaPredicted RBP9.6□□□□□ -0.87
CHTOP-202ENST00000368687 PRR15Q8IV56 129 aa9.59□□□□□ -0.87
CHTOP-202ENST00000368687 C8orf17Q9NRJ1 99 aa9.59□□□□□ -0.87
CHTOP-202ENST00000368687 PRO0461Q9UI25 63 aa9.59□□□□□ -0.87
CHTOP-202ENST00000368687 Q8N9P0 234 aaPredicted RBP9.57□□□□□ -0.88
CHTOP-202ENST00000368687 MT1HP80294 61 aa9.56□□□□□ -0.88
CHTOP-202ENST00000368687 BPY2O14599 106 aa9.55□□□□□ -0.88
CHTOP-202ENST00000368687 F8W1H4 67 aa9.54□□□□□ -0.88
CHTOP-202ENST00000368687 Q6ZVQ6 151 aa9.54□□□□□ -0.88
CHTOP-202ENST00000368687 ZCCHC13Q8WW36 166 aaKnown RBP9.53□□□□□ -0.88
CHTOP-202ENST00000368687 UBL5Q9BZL1 73 aa9.51□□□□□ -0.89
CHTOP-202ENST00000368687 TMEM254Q8TBM7 123 aa9.5□□□□□ -0.89
CHTOP-202ENST00000368687 K7EQZ3 153 aa9.49□□□□□ -0.89
CHTOP-202ENST00000368687 MMP24-AS1A0A0U1RRL7 71 aa9.48□□□□□ -0.89
CHTOP-202ENST00000368687 M0R2T5 61 aa9.48□□□□□ -0.89
CHTOP-202ENST00000368687 hDV103S1A0JD37 113 aa9.47□□□□□ -0.89
CHTOP-202ENST00000368687 MRPL34Q9BQ48 92 aaKnown RBP9.47□□□□□ -0.89
CHTOP-202ENST00000368687 RBM12B-AS1Q9P1G2 102 aa9.47□□□□□ -0.89
CHTOP-202ENST00000368687 FLGP20930 4061 aaPredicted RBP9.45□□□□□ -0.9
CHTOP-202ENST00000368687 KRTAP9-6A0A140TA67 174 aa9.43□□□□□ -0.9
CHTOP-202ENST00000368687 LINC00846Q9NV44 126 aa9.43□□□□□ -0.9
CHTOP-202ENST00000368687 ETDBQ3ZM63 59 aa9.41□□□□□ -0.9
CHTOP-202ENST00000368687 FAM236DA0A1B0GTK5 79 aa9.4□□□□□ -0.9
CHTOP-202ENST00000368687 FAM236CP0DP71 79 aa9.4□□□□□ -0.9
CHTOP-202ENST00000368687 HRES1P13985 223 aa9.39□□□□□ -0.91
CHTOP-202ENST00000368687 SPINK7P58062 85 aa9.39□□□□□ -0.91
CHTOP-202ENST00000368687 MPLKIPQ8TAP9 179 aa9.38□□□□□ -0.91
CHTOP-202ENST00000368687 NDUFS5O43920 106 aa9.37□□□□□ -0.91
CHTOP-202ENST00000368687 LORP23490 312 aaPredicted RBP9.37□□□□□ -0.91
CHTOP-202ENST00000368687 KRTAP10-6P60371 365 aaPredicted RBP9.36□□□□□ -0.91
CHTOP-202ENST00000368687 CASC2Q6XLA1 102 aa9.36□□□□□ -0.91
CHTOP-202ENST00000368687 Q8N9L7 120 aa9.34□□□□□ -0.91
CHTOP-202ENST00000368687 CXCL6P80162 114 aa9.32□□□□□ -0.92
CHTOP-202ENST00000368687 WFDC13Q8IUB5 93 aa9.32□□□□□ -0.92
CHTOP-202ENST00000368687 ACYP1P07311 99 aa9.3□□□□□ -0.92
CHTOP-202ENST00000368687 HCG22E2RYF7 251 aa9.29□□□□□ -0.92
CHTOP-202ENST00000368687 FSIP2Q5CZC0 6907 aa9.28□□□□□ -0.92
CHTOP-202ENST00000368687 FAM240AA0A1B0GVK7 77 aa9.26□□□□□ -0.93
CHTOP-202ENST00000368687 C7orf65Q6ZTY9 151 aa9.22□□□□□ -0.93
CHTOP-202ENST00000368687 CRCT1Q9UGL9 99 aa9.21□□□□□ -0.94
CHTOP-202ENST00000368687 ATP5EP2Q5VTU8 51 aa9.19□□□□□ -0.94
CHTOP-202ENST00000368687 Q5W150 140 aa9.18□□□□□ -0.94
CHTOP-202ENST00000368687 TP53AIP1Q9HCN2 124 aa9.18□□□□□ -0.94
CHTOP-202ENST00000368687 IGKV2D-30A0A075B6S6 120 aa9.17□□□□□ -0.94
CHTOP-202ENST00000368687 IGKV2-30P06310 120 aa9.17□□□□□ -0.94
CHTOP-202ENST00000368687 A0A1B0GV90 55 aa9.11□□□□□ -0.95
CHTOP-202ENST00000368687 KRTAP9-8Q9BYQ0 159 aa9.07□□□□□ -0.96
CHTOP-202ENST00000368687 H1FX-AS1Q4G0G2 97 aa9.06□□□□□ -0.96
CHTOP-202ENST00000368687 LINC00643Q86TS7 51 aa9.04□□□□□ -0.96
CHTOP-202ENST00000368687 HIST1H4AP62805 103 aaKnown RBP9.03□□□□□ -0.96
CHTOP-202ENST00000368687 J3QR89 54 aa9.02□□□□□ -0.97
CHTOP-202ENST00000368687 TRAV22A0A0B4J277 110 aa8.96□□□□□ -0.98
CHTOP-202ENST00000368687 MT2AP02795 61 aa8.96□□□□□ -0.98
CHTOP-202ENST00000368687 C4orf26Q17RF5 130 aa8.96□□□□□ -0.98
CHTOP-202ENST00000368687 LOC101927531A0A1B0GV80 90 aa8.92□□□□□ -0.98
CHTOP-202ENST00000368687 UQCRQO14949 82 aa8.92□□□□□ -0.98
CHTOP-202ENST00000368687 KRTAP10-10P60014 251 aa8.91□□□□□ -0.98
CHTOP-202ENST00000368687 LOC100996750A0A140TA64 210 aa8.9□□□□□ -0.98
CHTOP-202ENST00000368687 ATOX1O00244 68 aa8.9□□□□□ -0.98
CHTOP-202ENST00000368687 KRTAP4-6Q9BYQ5 205 aa8.9□□□□□ -0.98
CHTOP-202ENST00000368687 MT1FP04733 61 aa8.88□□□□□ -0.99
CHTOP-202ENST00000368687 CYP4F30PQ9H0H9 118 aa8.87□□□□□ -0.99
CHTOP-202ENST00000368687 C1orf64Q8NEQ6 169 aa8.86□□□□□ -0.99
CHTOP-202ENST00000368687 A0A087WVE0 104 aa8.85□□□□□ -0.99
CHTOP-202ENST00000368687 H0Y9P7 68 aa8.81□□□□□ -1
CHTOP-202ENST00000368687 S4R3F8 94 aa8.8□□□□□ -1
CHTOP-202ENST00000368687 USH2AO75445 5202 aa8.79□□□□□ -1
CHTOP-202ENST00000368687 KRTAP3-1Q9BYR8 98 aa8.79□□□□□ -1
CHTOP-202ENST00000368687 KRTAP9-3Q9BYQ3 159 aa8.78□□□□□ -1
CHTOP-202ENST00000368687 MP68P56378 58 aa8.74□□□□□ -1.01
CHTOP-202ENST00000368687 SSPOA2VEC9 5147 aa8.74□□□□□ -1.01
CHTOP-202ENST00000368687 K7ERU9 68 aa8.73□□□□□ -1.01
CHTOP-202ENST00000368687 CSAG1Q6PB30 78 aa8.73□□□□□ -1.01
CHTOP-202ENST00000368687 OCR1Q9BZK8 76 aa8.73□□□□□ -1.01
CHTOP-202ENST00000368687 C5orf47Q569G3 176 aa8.71□□□□□ -1.02
CHTOP-202ENST00000368687 SCGB1A1P11684 91 aa8.69□□□□□ -1.02
CHTOP-202ENST00000368687 LCA10Q71F78 164 aa8.69□□□□□ -1.02
CHTOP-202ENST00000368687 IMUPQ9GZP8 106 aa8.69□□□□□ -1.02
CHTOP-202ENST00000368687 LINC00208Q96KT6 92 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms