RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 IFI6P09912 130 aa2.02□□□□□ -2.09
ECHDC1-205ENST00000368295 PLAC8Q9NZF1 115 aa2.02□□□□□ -2.09
ECHDC1-205ENST00000368295 DNAH8Q96JB1 4490 aa2.02□□□□□ -2.09
ECHDC1-205ENST00000368295 DNAL4O96015 105 aa2.01□□□□□ -2.09
ECHDC1-205ENST00000368295 LINC00612Q8N6U2 182 aa2.01□□□□□ -2.09
ECHDC1-205ENST00000368295 MUC5BQ9HC84 5762 aaPredicted RBP2.01□□□□□ -2.09
ECHDC1-205ENST00000368295 MGPP08493 103 aa2.01□□□□□ -2.09
ECHDC1-205ENST00000368295 A0A087WVE0 104 aa2□□□□□ -2.09
ECHDC1-205ENST00000368295 TRBV6-4A0A1B0GX49 114 aa2□□□□□ -2.09
ECHDC1-205ENST00000368295 JMJD7-PLA2G4BH0Y9G9 81 aa2□□□□□ -2.09
ECHDC1-205ENST00000368295 M0R135 149 aa2□□□□□ -2.09
ECHDC1-205ENST00000368295 IGLV3-1P01715 115 aa1.99□□□□□ -2.09
ECHDC1-205ENST00000368295 IGKV3D-7A0A0C4DH55 119 aa1.99□□□□□ -2.09
ECHDC1-205ENST00000368295 IGKV3OR2-268A0A0C4DH90 116 aa1.99□□□□□ -2.09
ECHDC1-205ENST00000368295 V9GYV3 84 aa1.99□□□□□ -2.09
ECHDC1-205ENST00000368295 M0R3E3 92 aa1.98□□□□□ -2.09
ECHDC1-205ENST00000368295 ZNF137PP52743 207 aa1.98□□□□□ -2.09
ECHDC1-205ENST00000368295 NREPQ16612 68 aa1.98□□□□□ -2.09
ECHDC1-205ENST00000368295 TMEM263Q8WUH6 116 aaKnown RBP1.98□□□□□ -2.09
ECHDC1-205ENST00000368295 KLK9Q9UKQ9 250 aa1.98□□□□□ -2.09
ECHDC1-205ENST00000368295 NBDYA0A0U1RRE5 68 aa1.98□□□□□ -2.09
ECHDC1-205ENST00000368295 CTXND1A0A1B0GTU2 59 aa1.98□□□□□ -2.09
ECHDC1-205ENST00000368295 A0A1W2PNN7 141 aa1.98□□□□□ -2.09
ECHDC1-205ENST00000368295 H0Y9P7 68 aa1.98□□□□□ -2.09
ECHDC1-205ENST00000368295 HRES1P13985 223 aa1.98□□□□□ -2.09
ECHDC1-205ENST00000368295 FCER1GP30273 86 aa1.98□□□□□ -2.09
ECHDC1-205ENST00000368295 COX17Q14061 63 aa1.98□□□□□ -2.09
ECHDC1-205ENST00000368295 LCE1FQ5T754 118 aa1.98□□□□□ -2.09
ECHDC1-205ENST00000368295 LINC00208Q96KT6 92 aa1.98□□□□□ -2.09
ECHDC1-205ENST00000368295 SPRR4Q96PI1 79 aa1.98□□□□□ -2.09
ECHDC1-205ENST00000368295 SERF2P84101 59 aa1.97□□□□□ -2.09
ECHDC1-205ENST00000368295 WFDC6Q9BQY6 131 aa1.97□□□□□ -2.09
ECHDC1-205ENST00000368295 IGKV2-40A0A087WW87 121 aaPredicted RBP1.96□□□□□ -2.1
ECHDC1-205ENST00000368295 TRAV1-2A0A0B4J238 106 aa1.96□□□□□ -2.1
ECHDC1-205ENST00000368295 SMIM27A0A1W2PRY6 76 aa1.96□□□□□ -2.1
ECHDC1-205ENST00000368295 M0R1W7 72 aa1.96□□□□□ -2.1
ECHDC1-205ENST00000368295 IGKV2D-40P01614 121 aaPredicted RBP1.96□□□□□ -2.1
ECHDC1-205ENST00000368295 NDPQ00604 133 aa1.96□□□□□ -2.1
ECHDC1-205ENST00000368295 SPATA8Q6RVD6 105 aa1.96□□□□□ -2.1
ECHDC1-205ENST00000368295 OBSCN-AS1Q96MR7 158 aa1.96□□□□□ -2.1
ECHDC1-205ENST00000368295 UBL5Q9BZL1 73 aa1.96□□□□□ -2.1
ECHDC1-205ENST00000368295 TRAV21A0A0B4J279 112 aa1.96□□□□□ -2.1
ECHDC1-205ENST00000368295 PLNP26678 52 aa1.96□□□□□ -2.1
ECHDC1-205ENST00000368295 SNRPGP62308 76 aaKnown RBP1.96□□□□□ -2.1
ECHDC1-205ENST00000368295 KMT2DO14686 5537 aa1.95□□□□□ -2.1
ECHDC1-205ENST00000368295 LRCOL1A6NCL2 159 aa1.95□□□□□ -2.1
ECHDC1-205ENST00000368295 RPL37AP61513 92 aaKnown RBP1.95□□□□□ -2.1
ECHDC1-205ENST00000368295 KRTAP6-3Q3LI67 103 aa1.95□□□□□ -2.1
ECHDC1-205ENST00000368295 A0A087WTM6 91 aa1.94□□□□□ -2.1
ECHDC1-205ENST00000368295 DEFB131BA0A096LNP1 70 aa1.94□□□□□ -2.1
ECHDC1-205ENST00000368295 A0A0G2JQZ4 141 aa1.94□□□□□ -2.1
ECHDC1-205ENST00000368295 TRBV6-1A0A0K0K1D8 114 aa1.94□□□□□ -2.1
ECHDC1-205ENST00000368295 KRTAP10-12P60413 245 aa1.94□□□□□ -2.1
ECHDC1-205ENST00000368295 C10orf55Q5SWW7 151 aa1.94□□□□□ -2.1
ECHDC1-205ENST00000368295 C10orf113Q5VZT2 155 aa1.94□□□□□ -2.1
ECHDC1-205ENST00000368295 ZCCHC13Q8WW36 166 aaKnown RBP1.94□□□□□ -2.1
ECHDC1-205ENST00000368295 TMEM14CQ9P0S9 112 aa1.94□□□□□ -2.1
ECHDC1-205ENST00000368295 DSCR10P59022 87 aa1.94□□□□□ -2.1
ECHDC1-205ENST00000368295 TPRXLQ17RH7 258 aa1.94□□□□□ -2.1
ECHDC1-205ENST00000368295 ENHOQ6UWT2 76 aa1.94□□□□□ -2.1
ECHDC1-205ENST00000368295 C5orf56Q8N8D9 126 aa1.94□□□□□ -2.1
ECHDC1-205ENST00000368295 MUC12Q9UKN1 5478 aa1.93□□□□□ -2.1
ECHDC1-205ENST00000368295 J3QRE1 110 aa1.93□□□□□ -2.1
ECHDC1-205ENST00000368295 SPINK7P58062 85 aa1.93□□□□□ -2.1
ECHDC1-205ENST00000368295 FXYD3Q14802 87 aa1.93□□□□□ -2.1
ECHDC1-205ENST00000368295 KAAG1Q9UBP8 84 aa1.93□□□□□ -2.1
ECHDC1-205ENST00000368295 IGLV4-60A0A075B6I1 120 aa1.92□□□□□ -2.1
ECHDC1-205ENST00000368295 G3V318 75 aa1.92□□□□□ -2.1
ECHDC1-205ENST00000368295 RNASE3P12724 160 aaKnown RBP1.92□□□□□ -2.1
ECHDC1-205ENST00000368295 SPACA4Q8TDM5 124 aa1.92□□□□□ -2.1
ECHDC1-205ENST00000368295 GAFA1Q96PS6 74 aa1.92□□□□□ -2.1
ECHDC1-205ENST00000368295 TRGV4A0A0C4DH28 118 aa1.92□□□□□ -2.1
ECHDC1-205ENST00000368295 CAV3P56539 151 aa1.92□□□□□ -2.1
ECHDC1-205ENST00000368295 LOC110117498A0A087WWA1 95 aa1.91□□□□□ -2.1
ECHDC1-205ENST00000368295 IGKV2-29A2NJV5 120 aaPredicted RBP1.91□□□□□ -2.1
ECHDC1-205ENST00000368295 LINC01546A6NGU7 62 aa1.91□□□□□ -2.1
ECHDC1-205ENST00000368295 INE1O15225 51 aa1.91□□□□□ -2.1
ECHDC1-205ENST00000368295 Q6ZRN7 208 aaPredicted RBP1.91□□□□□ -2.1
ECHDC1-205ENST00000368295 K7EMI3 77 aa1.9□□□□□ -2.1
ECHDC1-205ENST00000368295 Q8N9L7 120 aa1.9□□□□□ -2.1
ECHDC1-205ENST00000368295 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.9□□□□□ -2.11
ECHDC1-205ENST00000368295 LINC00315P59091 139 aa1.9□□□□□ -2.11
ECHDC1-205ENST00000368295 DEFB114Q30KQ6 69 aa1.9□□□□□ -2.11
ECHDC1-205ENST00000368295 ZNF625Q96I27 306 aaPredicted RBP1.9□□□□□ -2.11
ECHDC1-205ENST00000368295 KRTAP11-1Q8IUC1 163 aa1.89□□□□□ -2.11
ECHDC1-205ENST00000368295 Q96NJ1 140 aa1.89□□□□□ -2.11
ECHDC1-205ENST00000368295 LINC00472Q9H8W2 130 aa1.89□□□□□ -2.11
ECHDC1-205ENST00000368295 MUC17Q685J3 4493 aa1.89□□□□□ -2.11
ECHDC1-205ENST00000368295 TRGV1A0A0A0MS02 117 aa1.89□□□□□ -2.11
ECHDC1-205ENST00000368295 IGIPA6NJ69 53 aa1.89□□□□□ -2.11
ECHDC1-205ENST00000368295 IGKV4-1P06312 121 aa1.89□□□□□ -2.11
ECHDC1-205ENST00000368295 HTN3P15516 51 aa1.89□□□□□ -2.11
ECHDC1-205ENST00000368295 IGKV2D-24A0A075B6R9 120 aa1.88□□□□□ -2.11
ECHDC1-205ENST00000368295 H3BRN7 92 aa1.88□□□□□ -2.11
ECHDC1-205ENST00000368295 FXYD4P59646 89 aa1.88□□□□□ -2.11
ECHDC1-205ENST00000368295 MINOS1Q5TGZ0 78 aa1.88□□□□□ -2.11
ECHDC1-205ENST00000368295 RPS27LQ71UM5 84 aaKnown RBP1.88□□□□□ -2.11
ECHDC1-205ENST00000368295 IGLV6-57P01721 117 aa1.87□□□□□ -2.11
ECHDC1-205ENST00000368295 LINC00304Q8N9R0 145 aa1.87□□□□□ -2.11
ECHDC1-205ENST00000368295 TRGV2A0A075B6R0 118 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms