RNA–Protein interactions for RNA: ENST00000366816.5

H3F3A-204, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene H3F3A, Length 799 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-204ENST00000366816 H3BT86 120 aa10.41□□□□□ -0.74
H3F3A-204ENST00000366816 C21orf62-AS1Q17RA5 79 aa10.41□□□□□ -0.74
H3F3A-204ENST00000366816 SPCS1Q9Y6A9 102 aa10.4□□□□□ -0.74
H3F3A-204ENST00000366816 COL5A1-AS1Q5SY13 56 aa10.39□□□□□ -0.75
H3F3A-204ENST00000366816 A0A1B0GVX0 72 aa10.38□□□□□ -0.75
H3F3A-204ENST00000366816 KRTAP9-2Q9BYQ4 174 aa10.38□□□□□ -0.75
H3F3A-204ENST00000366816 A0A1B0GW54 56 aa10.36□□□□□ -0.75
H3F3A-204ENST00000366816 PCP4L1A6NKN8 68 aa10.36□□□□□ -0.75
H3F3A-204ENST00000366816 J3KT08 172 aa10.36□□□□□ -0.75
H3F3A-204ENST00000366816 MT1HP80294 61 aa10.32□□□□□ -0.76
H3F3A-204ENST00000366816 C8orf87E5RJ46 101 aa10.31□□□□□ -0.76
H3F3A-204ENST00000366816 SMCPP49901 116 aaPredicted RBP10.31□□□□□ -0.76
H3F3A-204ENST00000366816 NREPQ16612 68 aa10.3□□□□□ -0.76
H3F3A-204ENST00000366816 COX6B2Q6YFQ2 88 aa10.3□□□□□ -0.76
H3F3A-204ENST00000366816 NDUFB1O75438 58 aa10.29□□□□□ -0.76
H3F3A-204ENST00000366816 A8MWP4 228 aa10.27□□□□□ -0.77
H3F3A-204ENST00000366816 IGKV3D-7A0A0C4DH55 119 aa10.26□□□□□ -0.77
H3F3A-204ENST00000366816 K7EP34 96 aa10.26□□□□□ -0.77
H3F3A-204ENST00000366816 PRO0461Q9UI25 63 aa10.24□□□□□ -0.77
H3F3A-204ENST00000366816 C8orf17Q9NRJ1 99 aa10.23□□□□□ -0.77
H3F3A-204ENST00000366816 PRR15Q8IV56 129 aa10.19□□□□□ -0.78
H3F3A-204ENST00000366816 Q8N9P0 234 aaPredicted RBP10.16□□□□□ -0.78
H3F3A-204ENST00000366816 FLGP20930 4061 aaPredicted RBP10.15□□□□□ -0.78
H3F3A-204ENST00000366816 M0R2T5 61 aa10.15□□□□□ -0.78
H3F3A-204ENST00000366816 KRTAP9-6A0A140TA67 174 aa10.14□□□□□ -0.79
H3F3A-204ENST00000366816 K7EQZ3 153 aa10.14□□□□□ -0.79
H3F3A-204ENST00000366816 Q6ZVQ6 151 aa10.14□□□□□ -0.79
H3F3A-204ENST00000366816 ZCCHC13Q8WW36 166 aaKnown RBP10.14□□□□□ -0.79
H3F3A-204ENST00000366816 GTF2H5Q6ZYL4 71 aa10.13□□□□□ -0.79
H3F3A-204ENST00000366816 BPY2O14599 106 aa10.12□□□□□ -0.79
H3F3A-204ENST00000366816 MMP24-AS1A0A0U1RRL7 71 aa10.11□□□□□ -0.79
H3F3A-204ENST00000366816 KRTAP10-6P60371 365 aaPredicted RBP10.09□□□□□ -0.79
H3F3A-204ENST00000366816 HRES1P13985 223 aa10.08□□□□□ -0.8
H3F3A-204ENST00000366816 LINC00846Q9NV44 126 aa10.08□□□□□ -0.8
H3F3A-204ENST00000366816 Q8N9L7 120 aa10.07□□□□□ -0.8
H3F3A-204ENST00000366816 F8W1H4 67 aa10.06□□□□□ -0.8
H3F3A-204ENST00000366816 LORP23490 312 aaPredicted RBP10.06□□□□□ -0.8
H3F3A-204ENST00000366816 TMEM254Q8TBM7 123 aa10.05□□□□□ -0.8
H3F3A-204ENST00000366816 MRPL34Q9BQ48 92 aaKnown RBP10.05□□□□□ -0.8
H3F3A-204ENST00000366816 hDV103S1A0JD37 113 aa10.04□□□□□ -0.8
H3F3A-204ENST00000366816 SPINK7P58062 85 aa10.03□□□□□ -0.8
H3F3A-204ENST00000366816 ETDBQ3ZM63 59 aa10.03□□□□□ -0.8
H3F3A-204ENST00000366816 LCE2DQ5TA82 110 aaPredicted RBP10.03□□□□□ -0.8
H3F3A-204ENST00000366816 MPLKIPQ8TAP9 179 aa10.03□□□□□ -0.8
H3F3A-204ENST00000366816 FAM236DA0A1B0GTK5 79 aa10.02□□□□□ -0.81
H3F3A-204ENST00000366816 FAM236CP0DP71 79 aa10.02□□□□□ -0.81
H3F3A-204ENST00000366816 NDUFS5O43920 106 aa10□□□□□ -0.81
H3F3A-204ENST00000366816 UBL5Q9BZL1 73 aa10□□□□□ -0.81
H3F3A-204ENST00000366816 WFDC13Q8IUB5 93 aa9.99□□□□□ -0.81
H3F3A-204ENST00000366816 RBM12B-AS1Q9P1G2 102 aa9.99□□□□□ -0.81
H3F3A-204ENST00000366816 CASC2Q6XLA1 102 aa9.94□□□□□ -0.82
H3F3A-204ENST00000366816 Q5W150 140 aa9.88□□□□□ -0.83
H3F3A-204ENST00000366816 HCG22E2RYF7 251 aa9.87□□□□□ -0.83
H3F3A-204ENST00000366816 IGKV2D-30A0A075B6S6 120 aa9.81□□□□□ -0.84
H3F3A-204ENST00000366816 IGKV2-30P06310 120 aa9.81□□□□□ -0.84
H3F3A-204ENST00000366816 CRCT1Q9UGL9 99 aa9.81□□□□□ -0.84
H3F3A-204ENST00000366816 CXCL6P80162 114 aa9.8□□□□□ -0.84
H3F3A-204ENST00000366816 KRTAP9-8Q9BYQ0 159 aa9.8□□□□□ -0.84
H3F3A-204ENST00000366816 A0A1B0GV90 55 aa9.78□□□□□ -0.84
H3F3A-204ENST00000366816 FSIP2Q5CZC0 6907 aa9.75□□□□□ -0.85
H3F3A-204ENST00000366816 ACYP1P07311 99 aa9.73□□□□□ -0.85
H3F3A-204ENST00000366816 C7orf65Q6ZTY9 151 aa9.73□□□□□ -0.85
H3F3A-204ENST00000366816 FAM240AA0A1B0GVK7 77 aa9.69□□□□□ -0.86
H3F3A-204ENST00000366816 MT2AP02795 61 aa9.68□□□□□ -0.86
H3F3A-204ENST00000366816 C4orf26Q17RF5 130 aa9.63□□□□□ -0.87
H3F3A-204ENST00000366816 H1FX-AS1Q4G0G2 97 aa9.63□□□□□ -0.87
H3F3A-204ENST00000366816 TP53AIP1Q9HCN2 124 aa9.63□□□□□ -0.87
H3F3A-204ENST00000366816 MT1FP04733 61 aa9.62□□□□□ -0.87
H3F3A-204ENST00000366816 HIST1H4AP62805 103 aaKnown RBP9.59□□□□□ -0.87
H3F3A-204ENST00000366816 ATP5EP2Q5VTU8 51 aa9.59□□□□□ -0.87
H3F3A-204ENST00000366816 KRTAP10-10P60014 251 aa9.57□□□□□ -0.88
H3F3A-204ENST00000366816 LINC00643Q86TS7 51 aa9.53□□□□□ -0.88
H3F3A-204ENST00000366816 A0A087WVE0 104 aa9.5□□□□□ -0.89
H3F3A-204ENST00000366816 KRTAP3-1Q9BYR8 98 aa9.5□□□□□ -0.89
H3F3A-204ENST00000366816 KRTAP9-3Q9BYQ3 159 aa9.48□□□□□ -0.89
H3F3A-204ENST00000366816 TRAV22A0A0B4J277 110 aa9.45□□□□□ -0.9
H3F3A-204ENST00000366816 C1orf64Q8NEQ6 169 aa9.45□□□□□ -0.9
H3F3A-204ENST00000366816 CYP4F30PQ9H0H9 118 aa9.45□□□□□ -0.9
H3F3A-204ENST00000366816 USH2AO75445 5202 aa9.43□□□□□ -0.9
H3F3A-204ENST00000366816 LCE2BO14633 110 aa9.42□□□□□ -0.9
H3F3A-204ENST00000366816 UQCRQO14949 82 aa9.4□□□□□ -0.9
H3F3A-204ENST00000366816 J3QR89 54 aa9.38□□□□□ -0.91
H3F3A-204ENST00000366816 LOC101927531A0A1B0GV80 90 aa9.37□□□□□ -0.91
H3F3A-204ENST00000366816 H0Y9P7 68 aa9.37□□□□□ -0.91
H3F3A-204ENST00000366816 C5orf47Q569G3 176 aa9.36□□□□□ -0.91
H3F3A-204ENST00000366816 S4R3F8 94 aa9.34□□□□□ -0.91
H3F3A-204ENST00000366816 LCA10Q71F78 164 aa9.31□□□□□ -0.92
H3F3A-204ENST00000366816 ATOX1O00244 68 aa9.3□□□□□ -0.92
H3F3A-204ENST00000366816 SSPOA2VEC9 5147 aa9.29□□□□□ -0.92
H3F3A-204ENST00000366816 OCR1Q9BZK8 76 aa9.27□□□□□ -0.93
H3F3A-204ENST00000366816 CSAG1Q6PB30 78 aa9.25□□□□□ -0.93
H3F3A-204ENST00000366816 LINC00208Q96KT6 92 aa9.24□□□□□ -0.93
H3F3A-204ENST00000366816 KLKP1Q107X0 134 aa9.2□□□□□ -0.94
H3F3A-204ENST00000366816 KRTAP3-3Q9BYR6 98 aa9.2□□□□□ -0.94
H3F3A-204ENST00000366816 MP68P56378 58 aa9.18□□□□□ -0.94
H3F3A-204ENST00000366816 FAM236AA0A1B0GUQ0 79 aa9.16□□□□□ -0.94
H3F3A-204ENST00000366816 FAM236BA0A1B0GV22 79 aa9.16□□□□□ -0.94
H3F3A-204ENST00000366816 KRTAP19-1Q8IUB9 90 aa9.16□□□□□ -0.94
H3F3A-204ENST00000366816 SCGB1A1P11684 91 aa9.15□□□□□ -0.94
H3F3A-204ENST00000366816 K7ERU9 68 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms