RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 SEC11CQ9BY50 192 aa2.27□□□□□ -2.05
RNU4-39P-201ENST00000362455 A8MUN3 132 aa2.26□□□□□ -2.05
RNU4-39P-201ENST00000362455 LEPROTO15243 131 aa2.26□□□□□ -2.05
RNU4-39P-201ENST00000362455 S100A7L2Q5SY68 101 aa2.26□□□□□ -2.05
RNU4-39P-201ENST00000362455 PRO1933Q9H354 126 aa2.26□□□□□ -2.05
RNU4-39P-201ENST00000362455 LAMTOR3Q9UHA4 124 aa2.26□□□□□ -2.05
RNU4-39P-201ENST00000362455 LINC00587B1AMM8 73 aa2.25□□□□□ -2.05
RNU4-39P-201ENST00000362455 J3QQQ9 107 aa2.25□□□□□ -2.05
RNU4-39P-201ENST00000362455 ELOF1P60002 83 aaKnown RBP2.25□□□□□ -2.05
RNU4-39P-201ENST00000362455 S100A12P80511 92 aa2.25□□□□□ -2.05
RNU4-39P-201ENST00000362455 DEFB105AQ8NG35 78 aa2.25□□□□□ -2.05
RNU4-39P-201ENST00000362455 IGLV5-48A0A075B6I7 105 aa2.24□□□□□ -2.05
RNU4-39P-201ENST00000362455 S100PP25815 95 aa2.24□□□□□ -2.05
RNU4-39P-201ENST00000362455 AKR1D1P51857 326 aa2.24□□□□□ -2.05
RNU4-39P-201ENST00000362455 KRTAP12-4P60329 112 aa2.24□□□□□ -2.05
RNU4-39P-201ENST00000362455 PMAIP1Q13794 54 aa2.24□□□□□ -2.05
RNU4-39P-201ENST00000362455 CLLU1Q5K131 121 aa2.24□□□□□ -2.05
RNU4-39P-201ENST00000362455 OBSCN-AS1Q96MR7 158 aa2.24□□□□□ -2.05
RNU4-39P-201ENST00000362455 PMCHL2Q9BQD1 86 aa2.24□□□□□ -2.05
RNU4-39P-201ENST00000362455 TEX49A0A1B0GTD5 131 aa2.23□□□□□ -2.05
RNU4-39P-201ENST00000362455 COX7BP24311 80 aa2.23□□□□□ -2.05
RNU4-39P-201ENST00000362455 IFITM2Q01629 132 aa2.23□□□□□ -2.05
RNU4-39P-201ENST00000362455 ATP11AUNQ6ZP68 121 aa2.23□□□□□ -2.05
RNU4-39P-201ENST00000362455 LINC00308Q8TCZ7 52 aa2.23□□□□□ -2.05
RNU4-39P-201ENST00000362455 CHCHD1Q96BP2 118 aaKnown RBP2.23□□□□□ -2.05
RNU4-39P-201ENST00000362455 MUC12Q9UKN1 5478 aa2.23□□□□□ -2.05
RNU4-39P-201ENST00000362455 C20orf202A1L168 122 aa2.22□□□□□ -2.05
RNU4-39P-201ENST00000362455 RHEBQ15382 184 aa2.22□□□□□ -2.05
RNU4-39P-201ENST00000362455 OR13C6PQ8NH95 151 aa2.22□□□□□ -2.05
RNU4-39P-201ENST00000362455 H3BT86 120 aa2.21□□□□□ -2.06
RNU4-39P-201ENST00000362455 KRTAP13-4Q3LI77 160 aa2.21□□□□□ -2.06
RNU4-39P-201ENST00000362455 SPANXDQ9BXN6 97 aa2.21□□□□□ -2.06
RNU4-39P-201ENST00000362455 SPANXCQ9NY87 97 aa2.21□□□□□ -2.06
RNU4-39P-201ENST00000362455 TRBV7-6A0A0J9YX20 115 aa2.2□□□□□ -2.06
RNU4-39P-201ENST00000362455 DPM2O94777 84 aa2.2□□□□□ -2.06
RNU4-39P-201ENST00000362455 TCL1BO95988 128 aa2.2□□□□□ -2.06
RNU4-39P-201ENST00000362455 TRBV7-7A0A0K0K1E9 115 aa2.19□□□□□ -2.06
RNU4-39P-201ENST00000362455 LEPROTL1O95214 131 aa2.19□□□□□ -2.06
RNU4-39P-201ENST00000362455 IGKCP01834 107 aa2.19□□□□□ -2.06
RNU4-39P-201ENST00000362455 PLNP26678 52 aa2.19□□□□□ -2.06
RNU4-39P-201ENST00000362455 TMEM258P61165 79 aa2.19□□□□□ -2.06
RNU4-39P-201ENST00000362455 Q96NJ1 140 aa2.19□□□□□ -2.06
RNU4-39P-201ENST00000362455 MDN1Q9NU22 5596 aa2.19□□□□□ -2.06
RNU4-39P-201ENST00000362455 TRAV7A0A075B6U4 112 aa2.18□□□□□ -2.06
RNU4-39P-201ENST00000362455 TIMM17BO60830 172 aa2.18□□□□□ -2.06
RNU4-39P-201ENST00000362455 FABP4P15090 132 aa2.18□□□□□ -2.06
RNU4-39P-201ENST00000362455 KMT2DO14686 5537 aa2.17□□□□□ -2.06
RNU4-39P-201ENST00000362455 TRBV20-1A0A075B6N2 111 aa2.16□□□□□ -2.06
RNU4-39P-201ENST00000362455 APOC3P02656 99 aa2.16□□□□□ -2.06
RNU4-39P-201ENST00000362455 TRGC2P03986 189 aa2.16□□□□□ -2.06
RNU4-39P-201ENST00000362455 S100A6P06703 90 aa2.16□□□□□ -2.06
RNU4-39P-201ENST00000362455 OCIAD2Q56VL3 154 aa2.16□□□□□ -2.06
RNU4-39P-201ENST00000362455 KTN1-AS1Q86SY8 53 aa2.16□□□□□ -2.06
RNU4-39P-201ENST00000362455 SMIM11BQ8TCY0 68 aa2.16□□□□□ -2.06
RNU4-39P-201ENST00000362455 CLEC2BQ92478 149 aa2.16□□□□□ -2.06
RNU4-39P-201ENST00000362455 ZNF815PA8K554 130 aa2.15□□□□□ -2.07
RNU4-39P-201ENST00000362455 KRTAP20-1Q3LI63 56 aa2.15□□□□□ -2.07
RNU4-39P-201ENST00000362455 Q6JHZ5 121 aa2.15□□□□□ -2.07
RNU4-39P-201ENST00000362455 LINC00575Q6W349 94 aa2.15□□□□□ -2.07
RNU4-39P-201ENST00000362455 Q6ZQY7 126 aa2.15□□□□□ -2.07
RNU4-39P-201ENST00000362455 MUSTN1Q8IVN3 82 aa2.15□□□□□ -2.07
RNU4-39P-201ENST00000362455 HSPB8Q9UJY1 196 aa2.15□□□□□ -2.07
RNU4-39P-201ENST00000362455 FAM236DA0A1B0GTK5 79 aa2.14□□□□□ -2.07
RNU4-39P-201ENST00000362455 SYS1-DBNDD2H3BUS1 97 aa2.14□□□□□ -2.07
RNU4-39P-201ENST00000362455 H3BUT2 72 aa2.14□□□□□ -2.07
RNU4-39P-201ENST00000362455 FAM236CP0DP71 79 aa2.14□□□□□ -2.07
RNU4-39P-201ENST00000362455 HIST1H4AP62805 103 aaKnown RBP2.14□□□□□ -2.07
RNU4-39P-201ENST00000362455 LINC01545Q5VT33 79 aa2.14□□□□□ -2.07
RNU4-39P-201ENST00000362455 KRTAP5-7Q6L8G8 165 aa2.14□□□□□ -2.07
RNU4-39P-201ENST00000362455 LINC00846Q9NV44 126 aa2.14□□□□□ -2.07
RNU4-39P-201ENST00000362455 F8WEM9 126 aa2.13□□□□□ -2.07
RNU4-39P-201ENST00000362455 TRAV13-2A0A0B4J235 113 aa2.12□□□□□ -2.07
RNU4-39P-201ENST00000362455 SVBPQ8N300 66 aa2.12□□□□□ -2.07
RNU4-39P-201ENST00000362455 hADV29S1A0JD25 119 aa2.11□□□□□ -2.07
RNU4-39P-201ENST00000362455 IFITM1P13164 125 aa2.11□□□□□ -2.07
RNU4-39P-201ENST00000362455 NHP2Q9NX24 153 aaKnown RBP2.11□□□□□ -2.07
RNU4-39P-201ENST00000362455 A0A087WSZ3 146 aa2.1□□□□□ -2.07
RNU4-39P-201ENST00000362455 C3orf79P0CE67 100 aa2.1□□□□□ -2.07
RNU4-39P-201ENST00000362455 ANKRD29Q8N6D5 301 aa2.1□□□□□ -2.07
RNU4-39P-201ENST00000362455 MT1BP07438 61 aa2.09□□□□□ -2.07
RNU4-39P-201ENST00000362455 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.09□□□□□ -2.07
RNU4-39P-201ENST00000362455 TEN1Q86WV5 123 aa2.09□□□□□ -2.07
RNU4-39P-201ENST00000362455 SNHG12Q9BXW3 62 aa2.09□□□□□ -2.07
RNU4-39P-201ENST00000362455 HIST1H2BKO60814 126 aa2.08□□□□□ -2.08
RNU4-39P-201ENST00000362455 HIST1H2BJP06899 126 aa2.08□□□□□ -2.08
RNU4-39P-201ENST00000362455 HIST1H2BOP23527 126 aa2.08□□□□□ -2.08
RNU4-39P-201ENST00000362455 HIST1H2BBP33778 126 aa2.08□□□□□ -2.08
RNU4-39P-201ENST00000362455 SPINK7P58062 85 aa2.08□□□□□ -2.08
RNU4-39P-201ENST00000362455 HIST1H2BDP58876 126 aa2.08□□□□□ -2.08
RNU4-39P-201ENST00000362455 HIST1H2BCP62807 126 aa2.08□□□□□ -2.08
RNU4-39P-201ENST00000362455 HIST2H2BEQ16778 126 aa2.08□□□□□ -2.08
RNU4-39P-201ENST00000362455 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.08□□□□□ -2.08
RNU4-39P-201ENST00000362455 COA5Q86WW8 74 aa2.08□□□□□ -2.08
RNU4-39P-201ENST00000362455 ATOH7Q8N100 152 aa2.08□□□□□ -2.08
RNU4-39P-201ENST00000362455 HIST1H2BHQ93079 126 aa2.08□□□□□ -2.08
RNU4-39P-201ENST00000362455 HIST1H2BNQ99877 126 aa2.08□□□□□ -2.08
RNU4-39P-201ENST00000362455 HIST1H2BMQ99879 126 aa2.08□□□□□ -2.08
RNU4-39P-201ENST00000362455 SS18L2Q9UHA2 77 aa2.08□□□□□ -2.08
RNU4-39P-201ENST00000362455 NDUFA5Q16718 116 aa2.07□□□□□ -2.08
RNU4-39P-201ENST00000362455 PPDPFLQ8WWR9 84 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms