RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 IGHV6-1A0A0B4J1U7 121 aa13.9□□□□□ -0.19
SSBP3-202ENST00000357475 A8MWP4 228 aa13.9□□□□□ -0.19
SSBP3-202ENST00000357475 A0A1B0GVX0 72 aa13.88□□□□□ -0.19
SSBP3-202ENST00000357475 CDIP1Q9H305 208 aa13.87□□□□□ -0.19
SSBP3-202ENST00000357475 J3QR89 54 aa13.86□□□□□ -0.19
SSBP3-202ENST00000357475 K7EQZ3 153 aa13.85□□□□□ -0.19
SSBP3-202ENST00000357475 Q8N9L7 120 aa13.85□□□□□ -0.19
SSBP3-202ENST00000357475 XP32Q5T750 250 aa13.85□□□□□ -0.19
SSBP3-202ENST00000357475 NDUFB1O75438 58 aa13.81□□□□□ -0.2
SSBP3-202ENST00000357475 PRR15Q8IV56 129 aa13.81□□□□□ -0.2
SSBP3-202ENST00000357475 LINC00313P59037 77 aa13.8□□□□□ -0.2
SSBP3-202ENST00000357475 KRTAP16-1A8MUX0 517 aa13.76□□□□□ -0.21
SSBP3-202ENST00000357475 K7ERU9 68 aa13.75□□□□□ -0.21
SSBP3-202ENST00000357475 C8orf17Q9NRJ1 99 aa13.75□□□□□ -0.21
SSBP3-202ENST00000357475 CXCL6P80162 114 aa13.74□□□□□ -0.21
SSBP3-202ENST00000357475 UBR4Q5T4S7 5183 aa13.74□□□□□ -0.21
SSBP3-202ENST00000357475 C8orf87E5RJ46 101 aa13.74□□□□□ -0.21
SSBP3-202ENST00000357475 LINC00643Q86TS7 51 aa13.71□□□□□ -0.21
SSBP3-202ENST00000357475 MMP24-AS1A0A0U1RRL7 71 aa13.7□□□□□ -0.22
SSBP3-202ENST00000357475 MUC17Q685J3 4493 aa13.68□□□□□ -0.22
SSBP3-202ENST00000357475 ATP5EP2Q5VTU8 51 aa13.65□□□□□ -0.22
SSBP3-202ENST00000357475 C20orf166-AS1Q96NR2 134 aa13.64□□□□□ -0.23
SSBP3-202ENST00000357475 RPL37P61927 97 aaKnown RBP13.63□□□□□ -0.23
SSBP3-202ENST00000357475 A8MUU9 505 aa13.61□□□□□ -0.23
SSBP3-202ENST00000357475 WFDC13Q8IUB5 93 aa13.61□□□□□ -0.23
SSBP3-202ENST00000357475 Q75L30 129 aa13.59□□□□□ -0.23
SSBP3-202ENST00000357475 hDV103S1A0JD37 113 aa13.59□□□□□ -0.23
SSBP3-202ENST00000357475 HIST1H4AP62805 103 aaKnown RBP13.56□□□□□ -0.24
SSBP3-202ENST00000357475 HCG22E2RYF7 251 aa13.55□□□□□ -0.24
SSBP3-202ENST00000357475 TMEM254Q8TBM7 123 aa13.55□□□□□ -0.24
SSBP3-202ENST00000357475 CASC2Q6XLA1 102 aa13.54□□□□□ -0.24
SSBP3-202ENST00000357475 MRPL34Q9BQ48 92 aaKnown RBP13.54□□□□□ -0.24
SSBP3-202ENST00000357475 PCOTHQ58A44 107 aa13.54□□□□□ -0.24
SSBP3-202ENST00000357475 Q8N9P0 234 aaPredicted RBP13.53□□□□□ -0.24
SSBP3-202ENST00000357475 A0A087WVE0 104 aa13.52□□□□□ -0.25
SSBP3-202ENST00000357475 RNF213Q63HN8 5207 aa13.5□□□□□ -0.25
SSBP3-202ENST00000357475 MT-ATP8P03928 68 aa13.49□□□□□ -0.25
SSBP3-202ENST00000357475 SEC61BP60468 96 aaKnown RBP13.49□□□□□ -0.25
SSBP3-202ENST00000357475 ATP11AUNQ6ZP68 121 aa13.43□□□□□ -0.26
SSBP3-202ENST00000357475 KRTAP4-1Q9BYQ7 146 aa13.43□□□□□ -0.26
SSBP3-202ENST00000357475 NDUFS5O43920 106 aa13.42□□□□□ -0.26
SSBP3-202ENST00000357475 MUC2Q02817 5179 aa13.42□□□□□ -0.26
SSBP3-202ENST00000357475 ZCCHC13Q8WW36 166 aaKnown RBP13.35□□□□□ -0.27
SSBP3-202ENST00000357475 Q5W150 140 aa13.3□□□□□ -0.28
SSBP3-202ENST00000357475 IMUPQ9GZP8 106 aa13.29□□□□□ -0.28
SSBP3-202ENST00000357475 TP53AIP1Q9HCN2 124 aa13.17□□□□□ -0.3
SSBP3-202ENST00000357475 FAM236AA0A1B0GUQ0 79 aa13.13□□□□□ -0.31
SSBP3-202ENST00000357475 FAM236BA0A1B0GV22 79 aa13.13□□□□□ -0.31
SSBP3-202ENST00000357475 OCR1Q9BZK8 76 aa13.12□□□□□ -0.31
SSBP3-202ENST00000357475 SPINK7P58062 85 aa13.1□□□□□ -0.31
SSBP3-202ENST00000357475 SCGB1A1P11684 91 aa13.08□□□□□ -0.31
SSBP3-202ENST00000357475 UQCRQO14949 82 aa13.06□□□□□ -0.32
SSBP3-202ENST00000357475 IGKV2D-30A0A075B6S6 120 aa13.03□□□□□ -0.32
SSBP3-202ENST00000357475 IGKV2-30P06310 120 aa13.03□□□□□ -0.32
SSBP3-202ENST00000357475 TRAV22A0A0B4J277 110 aa13.03□□□□□ -0.32
SSBP3-202ENST00000357475 FAT4Q6V0I7 4981 aa13.01□□□□□ -0.33
SSBP3-202ENST00000357475 HRES1P13985 223 aa13□□□□□ -0.33
SSBP3-202ENST00000357475 H0Y9P7 68 aa12.98□□□□□ -0.33
SSBP3-202ENST00000357475 KRTAP19-2Q3LHN2 52 aa12.98□□□□□ -0.33
SSBP3-202ENST00000357475 C7orf65Q6ZTY9 151 aa12.97□□□□□ -0.33
SSBP3-202ENST00000357475 MPLKIPQ8TAP9 179 aa12.9□□□□□ -0.34
SSBP3-202ENST00000357475 ATOX1O00244 68 aa12.89□□□□□ -0.35
SSBP3-202ENST00000357475 LCE2CQ5TA81 110 aa12.88□□□□□ -0.35
SSBP3-202ENST00000357475 TRAV7A0A075B6U4 112 aa12.87□□□□□ -0.35
SSBP3-202ENST00000357475 C5orf47Q569G3 176 aa12.86□□□□□ -0.35
SSBP3-202ENST00000357475 CYP4F30PQ9H0H9 118 aa12.86□□□□□ -0.35
SSBP3-202ENST00000357475 LINC00208Q96KT6 92 aa12.85□□□□□ -0.35
SSBP3-202ENST00000357475 SMIM20Q8N5G0 67 aa12.84□□□□□ -0.35
SSBP3-202ENST00000357475 LOC101927531A0A1B0GV80 90 aa12.83□□□□□ -0.35
SSBP3-202ENST00000357475 C1orf64Q8NEQ6 169 aa12.83□□□□□ -0.35
SSBP3-202ENST00000357475 MP68P56378 58 aa12.83□□□□□ -0.36
SSBP3-202ENST00000357475 COX6B2Q6YFQ2 88 aa12.78□□□□□ -0.36
SSBP3-202ENST00000357475 RBM12B-AS1Q9P1G2 102 aa12.78□□□□□ -0.36
SSBP3-202ENST00000357475 A0A0U1RQV1 116 aa12.76□□□□□ -0.37
SSBP3-202ENST00000357475 C4orf26Q17RF5 130 aa12.76□□□□□ -0.37
SSBP3-202ENST00000357475 SERP2Q8N6R1 65 aa12.74□□□□□ -0.37
SSBP3-202ENST00000357475 FAM236DA0A1B0GTK5 79 aa12.72□□□□□ -0.37
SSBP3-202ENST00000357475 FAM236CP0DP71 79 aa12.72□□□□□ -0.37
SSBP3-202ENST00000357475 KLKP1Q107X0 134 aa12.72□□□□□ -0.37
SSBP3-202ENST00000357475 H3BPC8 53 aa12.71□□□□□ -0.38
SSBP3-202ENST00000357475 FLGP20930 4061 aaPredicted RBP12.7□□□□□ -0.38
SSBP3-202ENST00000357475 MT1HP80294 61 aa12.63□□□□□ -0.39
SSBP3-202ENST00000357475 KRTAP3-1Q9BYR8 98 aa12.62□□□□□ -0.39
SSBP3-202ENST00000357475 SNURFQ9Y675 71 aa12.62□□□□□ -0.39
SSBP3-202ENST00000357475 C20orf197Q8N268 126 aa12.6□□□□□ -0.39
SSBP3-202ENST00000357475 COX7CP15954 63 aa12.58□□□□□ -0.4
SSBP3-202ENST00000357475 LCE2AQ5TA79 106 aaPredicted RBP12.58□□□□□ -0.4
SSBP3-202ENST00000357475 ANAPC13Q9BS18 74 aa12.57□□□□□ -0.4
SSBP3-202ENST00000357475 H1FX-AS1Q4G0G2 97 aa12.52□□□□□ -0.41
SSBP3-202ENST00000357475 CYSTM1Q9H1C7 97 aa12.42□□□□□ -0.42
SSBP3-202ENST00000357475 M0R2T5 61 aa12.4□□□□□ -0.42
SSBP3-202ENST00000357475 CCDC179H3BU77 68 aa12.37□□□□□ -0.43
SSBP3-202ENST00000357475 DMAC1Q96GE9 116 aa12.3□□□□□ -0.44
SSBP3-202ENST00000357475 S4R3F8 94 aa12.29□□□□□ -0.44
SSBP3-202ENST00000357475 A8MUN3 132 aa12.28□□□□□ -0.44
SSBP3-202ENST00000357475 LCA10Q71F78 164 aa12.27□□□□□ -0.44
SSBP3-202ENST00000357475 H7BZZ5 65 aa12.25□□□□□ -0.45
SSBP3-202ENST00000357475 KRTAP10-6P60371 365 aaPredicted RBP12.25□□□□□ -0.45
SSBP3-202ENST00000357475 SPANXA2-OT1Q8N9U9 137 aa12.21□□□□□ -0.45
SSBP3-202ENST00000357475 KRTAP3-3Q9BYR6 98 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms