RNA–Protein interactions for RNA: ENST00000343366.8

CDHR4-201, Transcript of cadherin related family member 4, humanhuman

TSL 1 (best) BASIC

Gene CDHR4, Length 1,188 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4-201ENST00000343366 LCE2DQ5TA82 110 aaPredicted RBP10.29□□□□□ -0.76
CDHR4-201ENST00000343366 NDUFB1O75438 58 aa10.26□□□□□ -0.77
CDHR4-201ENST00000343366 C9orf92A6NGG3 77 aa10.25□□□□□ -0.77
CDHR4-201ENST00000343366 UBL5Q9BZL1 73 aa10.25□□□□□ -0.77
CDHR4-201ENST00000343366 XP32Q5T750 250 aa10.24□□□□□ -0.77
CDHR4-201ENST00000343366 ACYP1P07311 99 aa10.23□□□□□ -0.77
CDHR4-201ENST00000343366 DEFB116Q30KQ4 102 aa10.23□□□□□ -0.77
CDHR4-201ENST00000343366 CRCT1Q9UGL9 99 aa10.23□□□□□ -0.77
CDHR4-201ENST00000343366 C8orf87E5RJ46 101 aa10.21□□□□□ -0.77
CDHR4-201ENST00000343366 LINC00313P59037 77 aa10.2□□□□□ -0.78
CDHR4-201ENST00000343366 A0A1B0GVX0 72 aa10.19□□□□□ -0.78
CDHR4-201ENST00000343366 A8MWP4 228 aa10.19□□□□□ -0.78
CDHR4-201ENST00000343366 SEC61BP60468 96 aaKnown RBP10.19□□□□□ -0.78
CDHR4-201ENST00000343366 Q6ZVQ6 151 aa10.19□□□□□ -0.78
CDHR4-201ENST00000343366 FAM240AA0A1B0GVK7 77 aa10.18□□□□□ -0.78
CDHR4-201ENST00000343366 BPY2O14599 106 aa10.18□□□□□ -0.78
CDHR4-201ENST00000343366 LINC00846Q9NV44 126 aa10.18□□□□□ -0.78
CDHR4-201ENST00000343366 IGHV6-1A0A0B4J1U7 121 aa10.16□□□□□ -0.78
CDHR4-201ENST00000343366 J3QR89 54 aa10.12□□□□□ -0.79
CDHR4-201ENST00000343366 Q75L30 129 aa10.12□□□□□ -0.79
CDHR4-201ENST00000343366 PRR15Q8IV56 129 aa10.12□□□□□ -0.79
CDHR4-201ENST00000343366 DSCR10P59022 87 aa10.11□□□□□ -0.79
CDHR4-201ENST00000343366 RPL37P61927 97 aaKnown RBP10.11□□□□□ -0.79
CDHR4-201ENST00000343366 IGKV3D-7A0A0C4DH55 119 aa10.1□□□□□ -0.79
CDHR4-201ENST00000343366 C20orf166-AS1Q96NR2 134 aa10.09□□□□□ -0.79
CDHR4-201ENST00000343366 CXCL6P80162 114 aa10.07□□□□□ -0.8
CDHR4-201ENST00000343366 A8MUU9 505 aa10.06□□□□□ -0.8
CDHR4-201ENST00000343366 C8orf17Q9NRJ1 99 aa10.06□□□□□ -0.8
CDHR4-201ENST00000343366 ATP11AUNQ6ZP68 121 aa10.04□□□□□ -0.8
CDHR4-201ENST00000343366 KRTAP16-1A8MUX0 517 aa10.03□□□□□ -0.8
CDHR4-201ENST00000343366 K7EQZ3 153 aa10.03□□□□□ -0.8
CDHR4-201ENST00000343366 NOTCH2NLQ7Z3S9 236 aa10.03□□□□□ -0.8
CDHR4-201ENST00000343366 ATP5EP2Q5VTU8 51 aa10.02□□□□□ -0.81
CDHR4-201ENST00000343366 KRTAP4-1Q9BYQ7 146 aa10.02□□□□□ -0.81
CDHR4-201ENST00000343366 PCOTHQ58A44 107 aa9.99□□□□□ -0.81
CDHR4-201ENST00000343366 TMEM254Q8TBM7 123 aa9.98□□□□□ -0.81
CDHR4-201ENST00000343366 MMP24-AS1A0A0U1RRL7 71 aa9.97□□□□□ -0.81
CDHR4-201ENST00000343366 hDV103S1A0JD37 113 aa9.97□□□□□ -0.81
CDHR4-201ENST00000343366 Q8N9P0 234 aaPredicted RBP9.96□□□□□ -0.82
CDHR4-201ENST00000343366 LINC00643Q86TS7 51 aa9.95□□□□□ -0.82
CDHR4-201ENST00000343366 MRPL34Q9BQ48 92 aaKnown RBP9.95□□□□□ -0.82
CDHR4-201ENST00000343366 K7ERU9 68 aa9.92□□□□□ -0.82
CDHR4-201ENST00000343366 LCE2CQ5TA81 110 aa9.92□□□□□ -0.82
CDHR4-201ENST00000343366 Q8N9L7 120 aa9.92□□□□□ -0.82
CDHR4-201ENST00000343366 CASC2Q6XLA1 102 aa9.91□□□□□ -0.82
CDHR4-201ENST00000343366 HCG22E2RYF7 251 aa9.9□□□□□ -0.82
CDHR4-201ENST00000343366 KRTAP19-2Q3LHN2 52 aa9.86□□□□□ -0.83
CDHR4-201ENST00000343366 WFDC13Q8IUB5 93 aa9.85□□□□□ -0.83
CDHR4-201ENST00000343366 ZCCHC13Q8WW36 166 aaKnown RBP9.84□□□□□ -0.83
CDHR4-201ENST00000343366 NDUFS5O43920 106 aa9.83□□□□□ -0.84
CDHR4-201ENST00000343366 HIST1H4AP62805 103 aaKnown RBP9.8□□□□□ -0.84
CDHR4-201ENST00000343366 MT1HP80294 61 aa9.77□□□□□ -0.85
CDHR4-201ENST00000343366 TP53AIP1Q9HCN2 124 aa9.77□□□□□ -0.85
CDHR4-201ENST00000343366 LORP23490 312 aaPredicted RBP9.74□□□□□ -0.85
CDHR4-201ENST00000343366 IMUPQ9GZP8 106 aa9.7□□□□□ -0.86
CDHR4-201ENST00000343366 KRTAP10-6P60371 365 aaPredicted RBP9.66□□□□□ -0.86
CDHR4-201ENST00000343366 SPINK7P58062 85 aa9.64□□□□□ -0.87
CDHR4-201ENST00000343366 A0A087WVE0 104 aa9.63□□□□□ -0.87
CDHR4-201ENST00000343366 FLGP20930 4061 aaPredicted RBP9.62□□□□□ -0.87
CDHR4-201ENST00000343366 KRTAP9-7A8MTY7 169 aa9.62□□□□□ -0.87
CDHR4-201ENST00000343366 Q5W150 140 aa9.61□□□□□ -0.87
CDHR4-201ENST00000343366 RBM12B-AS1Q9P1G2 102 aa9.6□□□□□ -0.87
CDHR4-201ENST00000343366 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.59□□□□□ -0.87
CDHR4-201ENST00000343366 UQCRQO14949 82 aa9.59□□□□□ -0.87
CDHR4-201ENST00000343366 C7orf65Q6ZTY9 151 aa9.59□□□□□ -0.87
CDHR4-201ENST00000343366 COX6B2Q6YFQ2 88 aa9.58□□□□□ -0.88
CDHR4-201ENST00000343366 MT-ATP8P03928 68 aa9.56□□□□□ -0.88
CDHR4-201ENST00000343366 TRAV22A0A0B4J277 110 aa9.55□□□□□ -0.88
CDHR4-201ENST00000343366 HRES1P13985 223 aa9.55□□□□□ -0.88
CDHR4-201ENST00000343366 IGKV2D-30A0A075B6S6 120 aa9.53□□□□□ -0.88
CDHR4-201ENST00000343366 IGKV2-30P06310 120 aa9.53□□□□□ -0.88
CDHR4-201ENST00000343366 SCGB1A1P11684 91 aa9.53□□□□□ -0.88
CDHR4-201ENST00000343366 MPLKIPQ8TAP9 179 aa9.53□□□□□ -0.88
CDHR4-201ENST00000343366 ATOX1O00244 68 aa9.52□□□□□ -0.89
CDHR4-201ENST00000343366 SSPOA2VEC9 5147 aa9.49□□□□□ -0.89
CDHR4-201ENST00000343366 FAM236DA0A1B0GTK5 79 aa9.48□□□□□ -0.89
CDHR4-201ENST00000343366 FAM236CP0DP71 79 aa9.48□□□□□ -0.89
CDHR4-201ENST00000343366 LOC101927531A0A1B0GV80 90 aa9.47□□□□□ -0.89
CDHR4-201ENST00000343366 OCR1Q9BZK8 76 aa9.47□□□□□ -0.89
CDHR4-201ENST00000343366 SMIM20Q8N5G0 67 aa9.46□□□□□ -0.9
CDHR4-201ENST00000343366 USH2AO75445 5202 aa9.46□□□□□ -0.9
CDHR4-201ENST00000343366 C5orf47Q569G3 176 aa9.45□□□□□ -0.9
CDHR4-201ENST00000343366 H0Y9P7 68 aa9.44□□□□□ -0.9
CDHR4-201ENST00000343366 MP68P56378 58 aa9.43□□□□□ -0.9
CDHR4-201ENST00000343366 FAM236AA0A1B0GUQ0 79 aa9.41□□□□□ -0.9
CDHR4-201ENST00000343366 FAM236BA0A1B0GV22 79 aa9.41□□□□□ -0.9
CDHR4-201ENST00000343366 H3BPC8 53 aa9.4□□□□□ -0.9
CDHR4-201ENST00000343366 CYP4F30PQ9H0H9 118 aa9.39□□□□□ -0.91
CDHR4-201ENST00000343366 C1orf64Q8NEQ6 169 aa9.35□□□□□ -0.91
CDHR4-201ENST00000343366 M0R2T5 61 aa9.34□□□□□ -0.91
CDHR4-201ENST00000343366 FCGBPQ9Y6R7 5405 aaPredicted RBP9.34□□□□□ -0.92
CDHR4-201ENST00000343366 TRAV7A0A075B6U4 112 aa9.33□□□□□ -0.92
CDHR4-201ENST00000343366 LINC00208Q96KT6 92 aa9.33□□□□□ -0.92
CDHR4-201ENST00000343366 C4orf26Q17RF5 130 aa9.3□□□□□ -0.92
CDHR4-201ENST00000343366 H1FX-AS1Q4G0G2 97 aa9.29□□□□□ -0.92
CDHR4-201ENST00000343366 SERP2Q8N6R1 65 aa9.2□□□□□ -0.94
CDHR4-201ENST00000343366 KRTAP9-8Q9BYQ0 159 aa9.2□□□□□ -0.94
CDHR4-201ENST00000343366 A8MUN3 132 aa9.16□□□□□ -0.94
CDHR4-201ENST00000343366 KLKP1Q107X0 134 aa9.14□□□□□ -0.95
CDHR4-201ENST00000343366 KRTAP3-1Q9BYR8 98 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms