RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 MT1BP07438 61 aa7.52□□□□□ -1.21
NECTIN1-202ENST00000340882 FABP2P12104 132 aa7.46□□□□□ -1.22
NECTIN1-202ENST00000340882 TRBV7-4A0A0J9YYF1 115 aa7.45□□□□□ -1.22
NECTIN1-202ENST00000340882 GHRHP01286 108 aa7.45□□□□□ -1.22
NECTIN1-202ENST00000340882 A0A1B0GVX0 72 aa7.44□□□□□ -1.22
NECTIN1-202ENST00000340882 C8orf87E5RJ46 101 aa7.44□□□□□ -1.22
NECTIN1-202ENST00000340882 DLEU1O43261 78 aa7.44□□□□□ -1.22
NECTIN1-202ENST00000340882 KRTAP10-5P60370 271 aa7.44□□□□□ -1.22
NECTIN1-202ENST00000340882 A0A1B0GV72 72 aa7.43□□□□□ -1.22
NECTIN1-202ENST00000340882 BATFQ16520 125 aa7.43□□□□□ -1.22
NECTIN1-202ENST00000340882 RAB37Q96AX2 223 aa7.43□□□□□ -1.22
NECTIN1-202ENST00000340882 COX8AP10176 69 aa7.41□□□□□ -1.22
NECTIN1-202ENST00000340882 H1FX-AS1Q4G0G2 97 aa7.41□□□□□ -1.22
NECTIN1-202ENST00000340882 ANKRD29Q8N6D5 301 aa7.41□□□□□ -1.22
NECTIN1-202ENST00000340882 H0YGX0 51 aa7.39□□□□□ -1.23
NECTIN1-202ENST00000340882 SNCGO76070 127 aa7.38□□□□□ -1.23
NECTIN1-202ENST00000340882 Q5VV11 94 aa7.38□□□□□ -1.23
NECTIN1-202ENST00000340882 HSD52Q0P140 79 aa7.36□□□□□ -1.23
NECTIN1-202ENST00000340882 KRTAP19-8Q3LI54 63 aa7.36□□□□□ -1.23
NECTIN1-202ENST00000340882 HIST1H4GQ99525 98 aa7.36□□□□□ -1.23
NECTIN1-202ENST00000340882 CCKP06307 115 aa7.34□□□□□ -1.23
NECTIN1-202ENST00000340882 TRACP01848 142 aa7.33□□□□□ -1.24
NECTIN1-202ENST00000340882 C2orf91Q6ZV80 131 aa7.33□□□□□ -1.24
NECTIN1-202ENST00000340882 HIGD1BQ9P298 99 aa7.33□□□□□ -1.24
NECTIN1-202ENST00000340882 UBE2V1Q13404 147 aa7.32□□□□□ -1.24
NECTIN1-202ENST00000340882 A0A1B0GX51 115 aa7.3□□□□□ -1.24
NECTIN1-202ENST00000340882 LYRM7Q5U5X0 104 aa7.3□□□□□ -1.24
NECTIN1-202ENST00000340882 TAX1BP3O14907 124 aa7.29□□□□□ -1.24
NECTIN1-202ENST00000340882 SPRR2EP22531 72 aa7.29□□□□□ -1.24
NECTIN1-202ENST00000340882 SPRR2BP35325 72 aa7.29□□□□□ -1.24
NECTIN1-202ENST00000340882 SPRR2AP35326 72 aa7.29□□□□□ -1.24
NECTIN1-202ENST00000340882 SPRR2GQ9BYE4 73 aa7.28□□□□□ -1.24
NECTIN1-202ENST00000340882 GTF2H5Q6ZYL4 71 aa7.27□□□□□ -1.25
NECTIN1-202ENST00000340882 KRTAP2-2Q9BYT5 123 aa7.27□□□□□ -1.25
NECTIN1-202ENST00000340882 KRTAP2-1Q9BYU5 128 aa7.27□□□□□ -1.25
NECTIN1-202ENST00000340882 IGKV3D-7A0A0C4DH55 119 aa7.26□□□□□ -1.25
NECTIN1-202ENST00000340882 A0A0B4J2C4 111 aa7.25□□□□□ -1.25
NECTIN1-202ENST00000340882 FAM236AA0A1B0GUQ0 79 aa7.24□□□□□ -1.25
NECTIN1-202ENST00000340882 FAM236BA0A1B0GV22 79 aa7.24□□□□□ -1.25
NECTIN1-202ENST00000340882 C9orf118A6NHY6 69 aa7.24□□□□□ -1.25
NECTIN1-202ENST00000340882 SPRR2FQ96RM1 72 aa7.24□□□□□ -1.25
NECTIN1-202ENST00000340882 VPS25Q9BRG1 176 aa7.24□□□□□ -1.25
NECTIN1-202ENST00000340882 C8orf17Q9NRJ1 99 aa7.24□□□□□ -1.25
NECTIN1-202ENST00000340882 TRIAP1O43715 76 aa7.22□□□□□ -1.25
NECTIN1-202ENST00000340882 ORMDL1Q9P0S3 153 aa7.22□□□□□ -1.25
NECTIN1-202ENST00000340882 TMEM238LA0A1B0GVL6 79 aa7.2□□□□□ -1.26
NECTIN1-202ENST00000340882 A6NJY4 79 aa7.2□□□□□ -1.26
NECTIN1-202ENST00000340882 J3KT08 172 aa7.2□□□□□ -1.26
NECTIN1-202ENST00000340882 K7EP34 96 aa7.2□□□□□ -1.26
NECTIN1-202ENST00000340882 A0A1W2PPM0 123 aa7.19□□□□□ -1.26
NECTIN1-202ENST00000340882 C5orf47Q569G3 176 aa7.19□□□□□ -1.26
NECTIN1-202ENST00000340882 CEND1Q8N111 149 aa7.19□□□□□ -1.26
NECTIN1-202ENST00000340882 DSCR8Q96T75 97 aa7.19□□□□□ -1.26
NECTIN1-202ENST00000340882 K7ERU9 68 aa7.18□□□□□ -1.26
NECTIN1-202ENST00000340882 TMEM256-PLSCR3K7ERE1 68 aa7.17□□□□□ -1.26
NECTIN1-202ENST00000340882 Q6ZVQ6 151 aa7.17□□□□□ -1.26
NECTIN1-202ENST00000340882 NDUFB1O75438 58 aa7.16□□□□□ -1.26
NECTIN1-202ENST00000340882 DNAL4O96015 105 aa7.16□□□□□ -1.26
NECTIN1-202ENST00000340882 PRO1854Q9UHT4 67 aa7.16□□□□□ -1.26
NECTIN1-202ENST00000340882 SPCS1Q9Y6A9 102 aa7.16□□□□□ -1.26
NECTIN1-202ENST00000340882 FXYD2P54710 66 aa7.15□□□□□ -1.26
NECTIN1-202ENST00000340882 LCE1AQ5T7P2 110 aa7.13□□□□□ -1.27
NECTIN1-202ENST00000340882 H3BQ85 93 aa7.12□□□□□ -1.27
NECTIN1-202ENST00000340882 Q6ZQT0 140 aa7.12□□□□□ -1.27
NECTIN1-202ENST00000340882 IGKV2D-30A0A075B6S6 120 aa7.11□□□□□ -1.27
NECTIN1-202ENST00000340882 IGKV2-30P06310 120 aa7.11□□□□□ -1.27
NECTIN1-202ENST00000340882 IMUPQ9GZP8 106 aa7.1□□□□□ -1.27
NECTIN1-202ENST00000340882 F8W1H4 67 aa7.09□□□□□ -1.27
NECTIN1-202ENST00000340882 RBM3P98179 157 aaKnown RBP7.09□□□□□ -1.27
NECTIN1-202ENST00000340882 J3QR89 54 aa7.08□□□□□ -1.28
NECTIN1-202ENST00000340882 SMCPP49901 116 aaPredicted RBP7.08□□□□□ -1.28
NECTIN1-202ENST00000340882 C4orf26Q17RF5 130 aa7.08□□□□□ -1.28
NECTIN1-202ENST00000340882 K7ERJ3 54 aa7.07□□□□□ -1.28
NECTIN1-202ENST00000340882 MRPL34Q9BQ48 92 aaKnown RBP7.06□□□□□ -1.28
NECTIN1-202ENST00000340882 MMP24-AS1A0A0U1RRL7 71 aa7.05□□□□□ -1.28
NECTIN1-202ENST00000340882 Q5W150 140 aa7.05□□□□□ -1.28
NECTIN1-202ENST00000340882 SPRR2DP22532 72 aa7.04□□□□□ -1.28
NECTIN1-202ENST00000340882 KLKP1Q107X0 134 aa7.04□□□□□ -1.28
NECTIN1-202ENST00000340882 TMEM254Q8TBM7 123 aa7.04□□□□□ -1.28
NECTIN1-202ENST00000340882 NAA38Q9BRA0 125 aaKnown RBP7.04□□□□□ -1.28
NECTIN1-202ENST00000340882 C7orf65Q6ZTY9 151 aa7.03□□□□□ -1.28
NECTIN1-202ENST00000340882 PRR15Q8IV56 129 aa7.03□□□□□ -1.28
NECTIN1-202ENST00000340882 PSMB2P49721 201 aa7.02□□□□□ -1.29
NECTIN1-202ENST00000340882 KRTAP3-1Q9BYR8 98 aa7.02□□□□□ -1.29
NECTIN1-202ENST00000340882 C9JAW5 83 aa7.01□□□□□ -1.29
NECTIN1-202ENST00000340882 NDUFS5O43920 106 aa7□□□□□ -1.29
NECTIN1-202ENST00000340882 PCP4P48539 62 aa7□□□□□ -1.29
NECTIN1-202ENST00000340882 C21orf62-AS1Q17RA5 79 aa7□□□□□ -1.29
NECTIN1-202ENST00000340882 KRTAP8-1Q8IUC2 63 aa6.99□□□□□ -1.29
NECTIN1-202ENST00000340882 CSAG1Q6PB30 78 aa6.98□□□□□ -1.29
NECTIN1-202ENST00000340882 LCA10Q71F78 164 aa6.98□□□□□ -1.29
NECTIN1-202ENST00000340882 PRO0461Q9UI25 63 aa6.98□□□□□ -1.29
NECTIN1-202ENST00000340882 S4R3F8 94 aa6.98□□□□□ -1.29
NECTIN1-202ENST00000340882 GPR98Q8WXG9 6306 aa6.96□□□□□ -1.29
NECTIN1-202ENST00000340882 hDV103S1A0JD37 113 aa6.95□□□□□ -1.3
NECTIN1-202ENST00000340882 SCGB1A1P11684 91 aa6.95□□□□□ -1.3
NECTIN1-202ENST00000340882 COX6CP09669 75 aa6.93□□□□□ -1.3
NECTIN1-202ENST00000340882 ATXN8Q156A1 80 aa6.93□□□□□ -1.3
NECTIN1-202ENST00000340882 SCGB1C2P0DMR2 95 aa6.92□□□□□ -1.3
NECTIN1-202ENST00000340882 ETDBQ3ZM63 59 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms