RNA–Protein interactions for RNA: ENST00000331479.3

SMDT1-201, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMDT1, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-201ENST00000331479 SEC61BP60468 96 aaKnown RBP13.98□□□□□ -0.17
SMDT1-201ENST00000331479 A0A1B0GVX0 72 aa13.96□□□□□ -0.17
SMDT1-201ENST00000331479 LINC00313P59037 77 aa13.96□□□□□ -0.18
SMDT1-201ENST00000331479 RPL37P61927 97 aaKnown RBP13.95□□□□□ -0.18
SMDT1-201ENST00000331479 Q6ZVQ6 151 aa13.95□□□□□ -0.18
SMDT1-201ENST00000331479 LINC00846Q9NV44 126 aa13.95□□□□□ -0.18
SMDT1-201ENST00000331479 A8MWP4 228 aa13.92□□□□□ -0.18
SMDT1-201ENST00000331479 PCOTHQ58A44 107 aa13.91□□□□□ -0.18
SMDT1-201ENST00000331479 IGKV3D-7A0A0C4DH55 119 aa13.9□□□□□ -0.18
SMDT1-201ENST00000331479 KRTAP16-1A8MUX0 517 aa13.89□□□□□ -0.19
SMDT1-201ENST00000331479 NDUFB1O75438 58 aa13.89□□□□□ -0.19
SMDT1-201ENST00000331479 Q75L30 129 aa13.88□□□□□ -0.19
SMDT1-201ENST00000331479 C8orf87E5RJ46 101 aa13.87□□□□□ -0.19
SMDT1-201ENST00000331479 C20orf166-AS1Q96NR2 134 aa13.87□□□□□ -0.19
SMDT1-201ENST00000331479 BPY2O14599 106 aa13.86□□□□□ -0.19
SMDT1-201ENST00000331479 KRTAP4-1Q9BYQ7 146 aa13.85□□□□□ -0.19
SMDT1-201ENST00000331479 A8MUU9 505 aa13.84□□□□□ -0.19
SMDT1-201ENST00000331479 UBL5Q9BZL1 73 aa13.84□□□□□ -0.19
SMDT1-201ENST00000331479 PRR15Q8IV56 129 aa13.83□□□□□ -0.19
SMDT1-201ENST00000331479 K7EQZ3 153 aa13.8□□□□□ -0.2
SMDT1-201ENST00000331479 C8orf17Q9NRJ1 99 aa13.79□□□□□ -0.2
SMDT1-201ENST00000331479 ATP11AUNQ6ZP68 121 aa13.75□□□□□ -0.21
SMDT1-201ENST00000331479 Q8N9L7 120 aa13.75□□□□□ -0.21
SMDT1-201ENST00000331479 MMP24-AS1A0A0U1RRL7 71 aa13.71□□□□□ -0.22
SMDT1-201ENST00000331479 ACYP1P07311 99 aa13.71□□□□□ -0.22
SMDT1-201ENST00000331479 FAM240AA0A1B0GVK7 77 aa13.7□□□□□ -0.22
SMDT1-201ENST00000331479 Q8N9P0 234 aaPredicted RBP13.64□□□□□ -0.23
SMDT1-201ENST00000331479 hDV103S1A0JD37 113 aa13.61□□□□□ -0.23
SMDT1-201ENST00000331479 CXCL6P80162 114 aa13.6□□□□□ -0.23
SMDT1-201ENST00000331479 TMEM254Q8TBM7 123 aa13.6□□□□□ -0.23
SMDT1-201ENST00000331479 MRPL34Q9BQ48 92 aaKnown RBP13.59□□□□□ -0.23
SMDT1-201ENST00000331479 FAT4Q6V0I7 4981 aa13.58□□□□□ -0.24
SMDT1-201ENST00000331479 WFDC13Q8IUB5 93 aa13.55□□□□□ -0.24
SMDT1-201ENST00000331479 CASC2Q6XLA1 102 aa13.53□□□□□ -0.24
SMDT1-201ENST00000331479 A0A0U1RQV1 116 aa13.5□□□□□ -0.25
SMDT1-201ENST00000331479 ZCCHC13Q8WW36 166 aaKnown RBP13.5□□□□□ -0.25
SMDT1-201ENST00000331479 HCG22E2RYF7 251 aa13.48□□□□□ -0.25
SMDT1-201ENST00000331479 J3QR89 54 aa13.48□□□□□ -0.25
SMDT1-201ENST00000331479 NDUFS5O43920 106 aa13.45□□□□□ -0.26
SMDT1-201ENST00000331479 ATP5EP2Q5VTU8 51 aa13.45□□□□□ -0.26
SMDT1-201ENST00000331479 KRTAP19-2Q3LHN2 52 aa13.43□□□□□ -0.26
SMDT1-201ENST00000331479 LINC00643Q86TS7 51 aa13.43□□□□□ -0.26
SMDT1-201ENST00000331479 LCE2CQ5TA81 110 aa13.36□□□□□ -0.27
SMDT1-201ENST00000331479 HIST1H4AP62805 103 aaKnown RBP13.34□□□□□ -0.27
SMDT1-201ENST00000331479 Q5W150 140 aa13.32□□□□□ -0.28
SMDT1-201ENST00000331479 SPINK7P58062 85 aa13.28□□□□□ -0.28
SMDT1-201ENST00000331479 K7ERU9 68 aa13.26□□□□□ -0.29
SMDT1-201ENST00000331479 A0A087WVE0 104 aa13.25□□□□□ -0.29
SMDT1-201ENST00000331479 HRES1P13985 223 aa13.25□□□□□ -0.29
SMDT1-201ENST00000331479 LCE2AQ5TA79 106 aaPredicted RBP13.25□□□□□ -0.29
SMDT1-201ENST00000331479 COX6B2Q6YFQ2 88 aa13.21□□□□□ -0.29
SMDT1-201ENST00000331479 MPLKIPQ8TAP9 179 aa13.18□□□□□ -0.3
SMDT1-201ENST00000331479 TP53AIP1Q9HCN2 124 aa13.16□□□□□ -0.3
SMDT1-201ENST00000331479 MT1HP80294 61 aa13.13□□□□□ -0.31
SMDT1-201ENST00000331479 FLGP20930 4061 aaPredicted RBP13.13□□□□□ -0.31
SMDT1-201ENST00000331479 IGKV2D-30A0A075B6S6 120 aa13.12□□□□□ -0.31
SMDT1-201ENST00000331479 IGKV2-30P06310 120 aa13.12□□□□□ -0.31
SMDT1-201ENST00000331479 RBM12B-AS1Q9P1G2 102 aa13.1□□□□□ -0.31
SMDT1-201ENST00000331479 C7orf65Q6ZTY9 151 aa13.07□□□□□ -0.32
SMDT1-201ENST00000331479 MT-ATP8P03928 68 aa13.05□□□□□ -0.32
SMDT1-201ENST00000331479 FAM236DA0A1B0GTK5 79 aa13.04□□□□□ -0.32
SMDT1-201ENST00000331479 FAM236CP0DP71 79 aa13.04□□□□□ -0.32
SMDT1-201ENST00000331479 TRAV22A0A0B4J277 110 aa12.97□□□□□ -0.33
SMDT1-201ENST00000331479 UQCRQO14949 82 aa12.96□□□□□ -0.33
SMDT1-201ENST00000331479 IMUPQ9GZP8 106 aa12.96□□□□□ -0.33
SMDT1-201ENST00000331479 OCR1Q9BZK8 76 aa12.92□□□□□ -0.34
SMDT1-201ENST00000331479 M0R2T5 61 aa12.9□□□□□ -0.34
SMDT1-201ENST00000331479 H0Y9P7 68 aa12.87□□□□□ -0.35
SMDT1-201ENST00000331479 C4orf26Q17RF5 130 aa12.86□□□□□ -0.35
SMDT1-201ENST00000331479 CYP4F30PQ9H0H9 118 aa12.85□□□□□ -0.35
SMDT1-201ENST00000331479 SCGB1A1P11684 91 aa12.84□□□□□ -0.35
SMDT1-201ENST00000331479 LOC101927531A0A1B0GV80 90 aa12.81□□□□□ -0.36
SMDT1-201ENST00000331479 ATOX1O00244 68 aa12.81□□□□□ -0.36
SMDT1-201ENST00000331479 KRTAP10-6P60371 365 aaPredicted RBP12.77□□□□□ -0.36
SMDT1-201ENST00000331479 FAM236AA0A1B0GUQ0 79 aa12.77□□□□□ -0.37
SMDT1-201ENST00000331479 FAM236BA0A1B0GV22 79 aa12.77□□□□□ -0.37
SMDT1-201ENST00000331479 LORP23490 312 aaPredicted RBP12.75□□□□□ -0.37
SMDT1-201ENST00000331479 C1orf64Q8NEQ6 169 aa12.74□□□□□ -0.37
SMDT1-201ENST00000331479 H1FX-AS1Q4G0G2 97 aa12.73□□□□□ -0.37
SMDT1-201ENST00000331479 LINC00208Q96KT6 92 aa12.73□□□□□ -0.37
SMDT1-201ENST00000331479 C5orf47Q569G3 176 aa12.72□□□□□ -0.37
SMDT1-201ENST00000331479 MP68P56378 58 aa12.71□□□□□ -0.37
SMDT1-201ENST00000331479 KRTAP3-1Q9BYR8 98 aa12.7□□□□□ -0.38
SMDT1-201ENST00000331479 KLKP1Q107X0 134 aa12.6□□□□□ -0.39
SMDT1-201ENST00000331479 TRAV7A0A075B6U4 112 aa12.59□□□□□ -0.39
SMDT1-201ENST00000331479 SMIM20Q8N5G0 67 aa12.59□□□□□ -0.39
SMDT1-201ENST00000331479 H3BPC8 53 aa12.58□□□□□ -0.4
SMDT1-201ENST00000331479 KRTAP9-8Q9BYQ0 159 aa12.53□□□□□ -0.4
SMDT1-201ENST00000331479 S4R3F8 94 aa12.43□□□□□ -0.42
SMDT1-201ENST00000331479 MT2AP02795 61 aa12.4□□□□□ -0.42
SMDT1-201ENST00000331479 LCA10Q71F78 164 aa12.39□□□□□ -0.43
SMDT1-201ENST00000331479 SERP2Q8N6R1 65 aa12.39□□□□□ -0.43
SMDT1-201ENST00000331479 KRTAP9-2Q9BYQ4 174 aa12.38□□□□□ -0.43
SMDT1-201ENST00000331479 LCE2DQ5TA82 110 aaPredicted RBP12.34□□□□□ -0.43
SMDT1-201ENST00000331479 A8MUN3 132 aa12.33□□□□□ -0.44
SMDT1-201ENST00000331479 SNURFQ9Y675 71 aa12.33□□□□□ -0.44
SMDT1-201ENST00000331479 MT1FP04733 61 aa12.32□□□□□ -0.44
SMDT1-201ENST00000331479 KRTAP3-3Q9BYR6 98 aa12.3□□□□□ -0.44
SMDT1-201ENST00000331479 C20orf197Q8N268 126 aa12.28□□□□□ -0.44
SMDT1-201ENST00000331479 KRTAP10-10P60014 251 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 176.9 ms