RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 ACYP2P14621 99 aa7.14□□□□□ -1.27
SHMT2-201ENST00000328923 K7EIL1 84 aa7.13□□□□□ -1.27
SHMT2-201ENST00000328923 PRLHP81277 87 aa7.13□□□□□ -1.27
SHMT2-201ENST00000328923 SPRR1BP22528 89 aa7.12□□□□□ -1.27
SHMT2-201ENST00000328923 DNAH10Q8IVF4 4471 aa7.11□□□□□ -1.27
SHMT2-201ENST00000328923 C8orf17Q9NRJ1 99 aa7.1□□□□□ -1.27
SHMT2-201ENST00000328923 COL7A1Q02388 2944 aa7.1□□□□□ -1.27
SHMT2-201ENST00000328923 A0A096LNI7 61 aa7.09□□□□□ -1.27
SHMT2-201ENST00000328923 STAB2Q8WWQ8 2551 aa7.08□□□□□ -1.28
SHMT2-201ENST00000328923 CASC10Q5T4H9 136 aa7.08□□□□□ -1.28
SHMT2-201ENST00000328923 HUWE1Q7Z6Z7 4374 aaKnown RBP7.07□□□□□ -1.28
SHMT2-201ENST00000328923 IGLV5-52A0A0A0MRZ9 124 aa7.06□□□□□ -1.28
SHMT2-201ENST00000328923 DMAC1Q96GE9 116 aa7.06□□□□□ -1.28
SHMT2-201ENST00000328923 KMT2CQ8NEZ4 4911 aaKnown RBP7.05□□□□□ -1.28
SHMT2-201ENST00000328923 Q96NJ1 140 aa7.05□□□□□ -1.28
SHMT2-201ENST00000328923 DNAH9Q9NYC9 4486 aa7.05□□□□□ -1.28
SHMT2-201ENST00000328923 DNAH1Q9P2D7 4330 aa7.05□□□□□ -1.28
SHMT2-201ENST00000328923 A8MUU9 505 aa7.04□□□□□ -1.28
SHMT2-201ENST00000328923 Q5W150 140 aa7.03□□□□□ -1.28
SHMT2-201ENST00000328923 DNAH7Q8WXX0 4024 aa7.03□□□□□ -1.28
SHMT2-201ENST00000328923 MRPL34Q9BQ48 92 aaKnown RBP7.03□□□□□ -1.28
SHMT2-201ENST00000328923 NOTCH2NLQ7Z3S9 236 aa7.01□□□□□ -1.29
SHMT2-201ENST00000328923 LINC00483Q53H64 154 aa7□□□□□ -1.29
SHMT2-201ENST00000328923 A0A1B0GVX0 72 aa6.98□□□□□ -1.29
SHMT2-201ENST00000328923 CRIPTQ9P021 101 aa6.98□□□□□ -1.29
SHMT2-201ENST00000328923 RYR3Q15413 4870 aa6.97□□□□□ -1.29
SHMT2-201ENST00000328923 KRTAP13-3Q3SY46 172 aa6.97□□□□□ -1.29
SHMT2-201ENST00000328923 FLG2Q5D862 2391 aaPredicted RBP6.97□□□□□ -1.29
SHMT2-201ENST00000328923 LINC00304Q8N9R0 145 aa6.96□□□□□ -1.29
SHMT2-201ENST00000328923 IGLV7-43P04211 117 aa6.95□□□□□ -1.3
SHMT2-201ENST00000328923 KRTAP11-1Q8IUC1 163 aa6.93□□□□□ -1.3
SHMT2-201ENST00000328923 WWC2-AS2Q96NR7 200 aa6.92□□□□□ -1.3
SHMT2-201ENST00000328923 CDK2AP2O75956 126 aa6.91□□□□□ -1.3
SHMT2-201ENST00000328923 KRTAP13-1Q8IUC0 172 aa6.91□□□□□ -1.3
SHMT2-201ENST00000328923 PLECQ15149 4684 aaKnown RBP6.9□□□□□ -1.3
SHMT2-201ENST00000328923 DYNC2H1Q8NCM8 4307 aaKnown RBP6.9□□□□□ -1.3
SHMT2-201ENST00000328923 NDUFAF8A1L188 74 aa6.9□□□□□ -1.31
SHMT2-201ENST00000328923 C14orf177Q52M58 125 aa6.9□□□□□ -1.31
SHMT2-201ENST00000328923 APLNQ9ULZ1 77 aa6.9□□□□□ -1.31
SHMT2-201ENST00000328923 KRTAP1-5Q9BYS1 174 aa6.88□□□□□ -1.31
SHMT2-201ENST00000328923 IGLV9-49A0A0B4J1Y8 123 aa6.87□□□□□ -1.31
SHMT2-201ENST00000328923 UBE2DNLQ8IWF7 75 aa6.86□□□□□ -1.31
SHMT2-201ENST00000328923 KRTAP16-1A8MUX0 517 aa6.85□□□□□ -1.31
SHMT2-201ENST00000328923 H0YAA0 97 aa6.85□□□□□ -1.31
SHMT2-201ENST00000328923 CHTF8P0CG12 524 aa6.85□□□□□ -1.31
SHMT2-201ENST00000328923 C20orf166-AS1Q96NR2 134 aa6.84□□□□□ -1.31
SHMT2-201ENST00000328923 NUPR2A6NF83 97 aa6.83□□□□□ -1.32
SHMT2-201ENST00000328923 SSBP3-AS1Q7Z2R9 100 aa6.82□□□□□ -1.32
SHMT2-201ENST00000328923 STARD9Q9P2P6 4700 aa6.82□□□□□ -1.32
SHMT2-201ENST00000328923 SPINT4Q6UDR6 99 aa6.82□□□□□ -1.32
SHMT2-201ENST00000328923 Q6ZSA8 131 aa6.79□□□□□ -1.32
SHMT2-201ENST00000328923 RYR2Q92736 4967 aa6.78□□□□□ -1.32
SHMT2-201ENST00000328923 A0A087WTM6 91 aa6.78□□□□□ -1.32
SHMT2-201ENST00000328923 KMT2AQ03164 3969 aa6.78□□□□□ -1.32
SHMT2-201ENST00000328923 SPINK1P00995 79 aa6.77□□□□□ -1.33
SHMT2-201ENST00000328923 SPINK6Q6UWN8 80 aa6.77□□□□□ -1.33
SHMT2-201ENST00000328923 NBDYA0A0U1RRE5 68 aa6.77□□□□□ -1.33
SHMT2-201ENST00000328923 SACSQ9NZJ4 4579 aa6.76□□□□□ -1.33
SHMT2-201ENST00000328923 IGKV2-30P06310 120 aa6.76□□□□□ -1.33
SHMT2-201ENST00000328923 FRAS1Q86XX4 4008 aa6.75□□□□□ -1.33
SHMT2-201ENST00000328923 LY6G6CO95867 125 aa6.75□□□□□ -1.33
SHMT2-201ENST00000328923 PSORS1C2Q9UIG4 136 aa6.75□□□□□ -1.33
SHMT2-201ENST00000328923 EPPK1P58107 5090 aaKnown RBP6.74□□□□□ -1.33
SHMT2-201ENST00000328923 VPS13DQ5THJ4 4388 aa6.73□□□□□ -1.33
SHMT2-201ENST00000328923 PANO1I0J062 215 aa6.73□□□□□ -1.33
SHMT2-201ENST00000328923 Q6ZRN7 208 aaPredicted RBP6.72□□□□□ -1.33
SHMT2-201ENST00000328923 DNAH2Q9P225 4427 aa6.72□□□□□ -1.33
SHMT2-201ENST00000328923 KRTAP15-1Q3LI76 137 aa6.72□□□□□ -1.33
SHMT2-201ENST00000328923 SPACA4Q8TDM5 124 aa6.72□□□□□ -1.33
SHMT2-201ENST00000328923 HECTD4Q9Y4D8 3996 aa6.71□□□□□ -1.34
SHMT2-201ENST00000328923 BIRC6Q9NR09 4857 aa6.69□□□□□ -1.34
SHMT2-201ENST00000328923 FAM229AH3BQW9 127 aa6.69□□□□□ -1.34
SHMT2-201ENST00000328923 IGKV2D-30A0A075B6S6 120 aa6.67□□□□□ -1.34
SHMT2-201ENST00000328923 HYDINQ4G0P3 5121 aa6.66□□□□□ -1.34
SHMT2-201ENST00000328923 ANAPC11Q9NYG5 84 aa6.66□□□□□ -1.34
SHMT2-201ENST00000328923 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.66□□□□□ -1.34
SHMT2-201ENST00000328923 DNAH6Q9C0G6 4158 aa6.65□□□□□ -1.34
SHMT2-201ENST00000328923 TYMSOSQ8TAI1 123 aa6.65□□□□□ -1.34
SHMT2-201ENST00000328923 TPRXLQ17RH7 258 aa6.64□□□□□ -1.35
SHMT2-201ENST00000328923 A0A1B0GU33 70 aa6.64□□□□□ -1.35
SHMT2-201ENST00000328923 DNAH8Q96JB1 4490 aa6.6□□□□□ -1.35
SHMT2-201ENST00000328923 Q8N1X5 172 aa6.59□□□□□ -1.35
SHMT2-201ENST00000328923 DNAH17Q9UFH2 4485 aa6.59□□□□□ -1.35
SHMT2-201ENST00000328923 H1FX-AS1Q4G0G2 97 aa6.58□□□□□ -1.36
SHMT2-201ENST00000328923 LUZP6Q538Z0 58 aa6.58□□□□□ -1.36
SHMT2-201ENST00000328923 K7ERS5 55 aa6.57□□□□□ -1.36
SHMT2-201ENST00000328923 C10orf95Q9H7T3 257 aa6.56□□□□□ -1.36
SHMT2-201ENST00000328923 CIRBP-AS1Q8TBR5 109 aa6.54□□□□□ -1.36
SHMT2-201ENST00000328923 DNAH11Q96DT5 4516 aa6.51□□□□□ -1.37
SHMT2-201ENST00000328923 DNAH5Q8TE73 4624 aa6.49□□□□□ -1.37
SHMT2-201ENST00000328923 KRTAP17-1Q9BYP8 105 aa6.49□□□□□ -1.37
SHMT2-201ENST00000328923 KRTAP10-2P60368 255 aa6.44□□□□□ -1.38
SHMT2-201ENST00000328923 FAT2Q9NYQ8 4349 aa6.43□□□□□ -1.38
SHMT2-201ENST00000328923 COX6B2Q6YFQ2 88 aa6.43□□□□□ -1.38
SHMT2-201ENST00000328923 HERC2O95714 4834 aa6.42□□□□□ -1.38
SHMT2-201ENST00000328923 LRP1BQ9NZR2 4599 aa6.41□□□□□ -1.38
SHMT2-201ENST00000328923 PCLOQ9Y6V0 5065 aa6.39□□□□□ -1.39
SHMT2-201ENST00000328923 DMBT1Q9UGM3 2413 aaPredicted RBP6.39□□□□□ -1.39
SHMT2-201ENST00000328923 PKD1P98161 4303 aa6.38□□□□□ -1.39
SHMT2-201ENST00000328923 KIAA1109Q2LD37 5005 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 289.2 ms