RNA–Protein interactions for RNA: ENST00000328270.3

TNRC18-201, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 5

Gene TNRC18, Length 1,220 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-201ENST00000328270 PDE6GP18545 87 aa11.29□□□□□ -0.6
TNRC18-201ENST00000328270 MT1HP80294 61 aa11.27□□□□□ -0.61
TNRC18-201ENST00000328270 A0A1B0GVX0 72 aa11.26□□□□□ -0.61
TNRC18-201ENST00000328270 J3KT08 172 aa11.26□□□□□ -0.61
TNRC18-201ENST00000328270 A0A1B0GW54 56 aa11.25□□□□□ -0.61
TNRC18-201ENST00000328270 COX6B2Q6YFQ2 88 aa11.25□□□□□ -0.61
TNRC18-201ENST00000328270 MTURNQ8N3F0 131 aa11.25□□□□□ -0.61
TNRC18-201ENST00000328270 H3BT86 120 aa11.24□□□□□ -0.61
TNRC18-201ENST00000328270 C8orf87E5RJ46 101 aa11.23□□□□□ -0.61
TNRC18-201ENST00000328270 KRTAP9-2Q9BYQ4 174 aa11.2□□□□□ -0.62
TNRC18-201ENST00000328270 FLGP20930 4061 aaPredicted RBP11.19□□□□□ -0.62
TNRC18-201ENST00000328270 SPCS1Q9Y6A9 102 aa11.17□□□□□ -0.62
TNRC18-201ENST00000328270 NDUFB1O75438 58 aa11.16□□□□□ -0.62
TNRC18-201ENST00000328270 COL5A1-AS1Q5SY13 56 aa11.15□□□□□ -0.62
TNRC18-201ENST00000328270 A8MWP4 228 aa11.13□□□□□ -0.63
TNRC18-201ENST00000328270 NREPQ16612 68 aa11.11□□□□□ -0.63
TNRC18-201ENST00000328270 IGKV3D-7A0A0C4DH55 119 aa11.09□□□□□ -0.63
TNRC18-201ENST00000328270 M0R2T5 61 aa11.08□□□□□ -0.64
TNRC18-201ENST00000328270 C8orf17Q9NRJ1 99 aa11.08□□□□□ -0.64
TNRC18-201ENST00000328270 SMCPP49901 116 aaPredicted RBP11.05□□□□□ -0.64
TNRC18-201ENST00000328270 KRTAP10-6P60371 365 aaPredicted RBP11.03□□□□□ -0.64
TNRC18-201ENST00000328270 PRR15Q8IV56 129 aa11.03□□□□□ -0.64
TNRC18-201ENST00000328270 Q8N9P0 234 aaPredicted RBP11.03□□□□□ -0.64
TNRC18-201ENST00000328270 ZCCHC13Q8WW36 166 aaKnown RBP11.02□□□□□ -0.65
TNRC18-201ENST00000328270 K7EP34 96 aa11.01□□□□□ -0.65
TNRC18-201ENST00000328270 LORP23490 312 aaPredicted RBP11.01□□□□□ -0.65
TNRC18-201ENST00000328270 PCP4L1A6NKN8 68 aa10.99□□□□□ -0.65
TNRC18-201ENST00000328270 PRO0461Q9UI25 63 aa10.99□□□□□ -0.65
TNRC18-201ENST00000328270 Q6ZVQ6 151 aa10.98□□□□□ -0.65
TNRC18-201ENST00000328270 HRES1P13985 223 aa10.96□□□□□ -0.65
TNRC18-201ENST00000328270 MMP24-AS1A0A0U1RRL7 71 aa10.95□□□□□ -0.66
TNRC18-201ENST00000328270 K7EQZ3 153 aa10.95□□□□□ -0.66
TNRC18-201ENST00000328270 LCE2DQ5TA82 110 aaPredicted RBP10.95□□□□□ -0.66
TNRC18-201ENST00000328270 BPY2O14599 106 aa10.94□□□□□ -0.66
TNRC18-201ENST00000328270 FAM236DA0A1B0GTK5 79 aa10.92□□□□□ -0.66
TNRC18-201ENST00000328270 FAM236CP0DP71 79 aa10.92□□□□□ -0.66
TNRC18-201ENST00000328270 MPLKIPQ8TAP9 179 aa10.92□□□□□ -0.66
TNRC18-201ENST00000328270 TMEM254Q8TBM7 123 aa10.91□□□□□ -0.66
TNRC18-201ENST00000328270 RBM12B-AS1Q9P1G2 102 aa10.91□□□□□ -0.66
TNRC18-201ENST00000328270 MRPL34Q9BQ48 92 aaKnown RBP10.9□□□□□ -0.66
TNRC18-201ENST00000328270 GTF2H5Q6ZYL4 71 aa10.89□□□□□ -0.67
TNRC18-201ENST00000328270 SPINK7P58062 85 aa10.88□□□□□ -0.67
TNRC18-201ENST00000328270 hDV103S1A0JD37 113 aa10.87□□□□□ -0.67
TNRC18-201ENST00000328270 Q8N9L7 120 aa10.83□□□□□ -0.68
TNRC18-201ENST00000328270 LINC00846Q9NV44 126 aa10.83□□□□□ -0.68
TNRC18-201ENST00000328270 UBL5Q9BZL1 73 aa10.81□□□□□ -0.68
TNRC18-201ENST00000328270 NDUFS5O43920 106 aa10.8□□□□□ -0.68
TNRC18-201ENST00000328270 F8W1H4 67 aa10.79□□□□□ -0.68
TNRC18-201ENST00000328270 WFDC13Q8IUB5 93 aa10.77□□□□□ -0.69
TNRC18-201ENST00000328270 KRTAP9-6A0A140TA67 174 aa10.76□□□□□ -0.69
TNRC18-201ENST00000328270 ETDBQ3ZM63 59 aa10.75□□□□□ -0.69
TNRC18-201ENST00000328270 CASC2Q6XLA1 102 aa10.75□□□□□ -0.69
TNRC18-201ENST00000328270 KRTAP9-8Q9BYQ0 159 aa10.68□□□□□ -0.7
TNRC18-201ENST00000328270 HCG22E2RYF7 251 aa10.67□□□□□ -0.7
TNRC18-201ENST00000328270 FSIP2Q5CZC0 6907 aa10.66□□□□□ -0.7
TNRC18-201ENST00000328270 Q5W150 140 aa10.66□□□□□ -0.7
TNRC18-201ENST00000328270 IGKV2D-30A0A075B6S6 120 aa10.61□□□□□ -0.71
TNRC18-201ENST00000328270 IGKV2-30P06310 120 aa10.61□□□□□ -0.71
TNRC18-201ENST00000328270 CRCT1Q9UGL9 99 aa10.6□□□□□ -0.71
TNRC18-201ENST00000328270 CXCL6P80162 114 aa10.59□□□□□ -0.71
TNRC18-201ENST00000328270 C7orf65Q6ZTY9 151 aa10.59□□□□□ -0.71
TNRC18-201ENST00000328270 MT2AP02795 61 aa10.56□□□□□ -0.72
TNRC18-201ENST00000328270 MT1FP04733 61 aa10.48□□□□□ -0.73
TNRC18-201ENST00000328270 ACYP1P07311 99 aa10.48□□□□□ -0.73
TNRC18-201ENST00000328270 H1FX-AS1Q4G0G2 97 aa10.47□□□□□ -0.73
TNRC18-201ENST00000328270 FAM240AA0A1B0GVK7 77 aa10.46□□□□□ -0.73
TNRC18-201ENST00000328270 KRTAP10-10P60014 251 aa10.43□□□□□ -0.74
TNRC18-201ENST00000328270 TP53AIP1Q9HCN2 124 aa10.43□□□□□ -0.74
TNRC18-201ENST00000328270 C4orf26Q17RF5 130 aa10.41□□□□□ -0.74
TNRC18-201ENST00000328270 A0A1B0GV90 55 aa10.39□□□□□ -0.75
TNRC18-201ENST00000328270 ATP5EP2Q5VTU8 51 aa10.38□□□□□ -0.75
TNRC18-201ENST00000328270 USH2AO75445 5202 aa10.36□□□□□ -0.75
TNRC18-201ENST00000328270 KRTAP9-3Q9BYQ3 159 aa10.34□□□□□ -0.75
TNRC18-201ENST00000328270 HIST1H4AP62805 103 aaKnown RBP10.31□□□□□ -0.76
TNRC18-201ENST00000328270 LCE2BO14633 110 aa10.27□□□□□ -0.77
TNRC18-201ENST00000328270 LINC00643Q86TS7 51 aa10.25□□□□□ -0.77
TNRC18-201ENST00000328270 KRTAP3-1Q9BYR8 98 aa10.25□□□□□ -0.77
TNRC18-201ENST00000328270 SSPOA2VEC9 5147 aa10.24□□□□□ -0.77
TNRC18-201ENST00000328270 TRAV22A0A0B4J277 110 aa10.24□□□□□ -0.77
TNRC18-201ENST00000328270 C1orf64Q8NEQ6 169 aa10.23□□□□□ -0.77
TNRC18-201ENST00000328270 CYP4F30PQ9H0H9 118 aa10.2□□□□□ -0.78
TNRC18-201ENST00000328270 A0A087WVE0 104 aa10.18□□□□□ -0.78
TNRC18-201ENST00000328270 LOC101927531A0A1B0GV80 90 aa10.16□□□□□ -0.78
TNRC18-201ENST00000328270 S4R3F8 94 aa10.16□□□□□ -0.78
TNRC18-201ENST00000328270 UQCRQO14949 82 aa10.15□□□□□ -0.78
TNRC18-201ENST00000328270 C5orf47Q569G3 176 aa10.14□□□□□ -0.79
TNRC18-201ENST00000328270 H0Y9P7 68 aa10.11□□□□□ -0.79
TNRC18-201ENST00000328270 J3QR89 54 aa10.09□□□□□ -0.79
TNRC18-201ENST00000328270 LCA10Q71F78 164 aa10.09□□□□□ -0.79
TNRC18-201ENST00000328270 ATOX1O00244 68 aa10.08□□□□□ -0.8
TNRC18-201ENST00000328270 CSAG1Q6PB30 78 aa10.05□□□□□ -0.8
TNRC18-201ENST00000328270 KRTAP19-1Q8IUB9 90 aa10.02□□□□□ -0.81
TNRC18-201ENST00000328270 OCR1Q9BZK8 76 aa9.99□□□□□ -0.81
TNRC18-201ENST00000328270 FCGBPQ9Y6R7 5405 aaPredicted RBP9.99□□□□□ -0.81
TNRC18-201ENST00000328270 FAM236AA0A1B0GUQ0 79 aa9.96□□□□□ -0.82
TNRC18-201ENST00000328270 FAM236BA0A1B0GV22 79 aa9.96□□□□□ -0.82
TNRC18-201ENST00000328270 LINC00208Q96KT6 92 aa9.96□□□□□ -0.82
TNRC18-201ENST00000328270 KRTAP3-3Q9BYR6 98 aa9.95□□□□□ -0.82
TNRC18-201ENST00000328270 MP68P56378 58 aa9.92□□□□□ -0.82
TNRC18-201ENST00000328270 KLKP1Q107X0 134 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms