RNA–Protein interactions for RNA: ENST00000321358.11

YBX1-201, Transcript of Y-box binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene YBX1, Length 1,514 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-201ENST00000321358 A8MWP4 228 aa11.67□□□□□ -0.54
YBX1-201ENST00000321358 IGHV6-1A0A0B4J1U7 121 aa11.65□□□□□ -0.54
YBX1-201ENST00000321358 A0A1B0GVX0 72 aa11.65□□□□□ -0.55
YBX1-201ENST00000321358 LINC00313P59037 77 aa11.62□□□□□ -0.55
YBX1-201ENST00000321358 DSCR10P59022 87 aa11.6□□□□□ -0.55
YBX1-201ENST00000321358 IGKV3D-7A0A0C4DH55 119 aa11.6□□□□□ -0.55
YBX1-201ENST00000321358 C8orf87E5RJ46 101 aa11.6□□□□□ -0.55
YBX1-201ENST00000321358 K7ERU9 68 aa11.6□□□□□ -0.55
YBX1-201ENST00000321358 PRR15Q8IV56 129 aa11.6□□□□□ -0.55
YBX1-201ENST00000321358 CXCL6P80162 114 aa11.56□□□□□ -0.56
YBX1-201ENST00000321358 XP32Q5T750 250 aa11.56□□□□□ -0.56
YBX1-201ENST00000321358 K7EQZ3 153 aa11.55□□□□□ -0.56
YBX1-201ENST00000321358 LPAP08519 4548 aa11.55□□□□□ -0.56
YBX1-201ENST00000321358 ATP5EP2Q5VTU8 51 aa11.54□□□□□ -0.56
YBX1-201ENST00000321358 LINC00643Q86TS7 51 aa11.53□□□□□ -0.56
YBX1-201ENST00000321358 C8orf17Q9NRJ1 99 aa11.52□□□□□ -0.57
YBX1-201ENST00000321358 NOTCH2NLQ7Z3S9 236 aa11.51□□□□□ -0.57
YBX1-201ENST00000321358 Q8N9L7 120 aa11.51□□□□□ -0.57
YBX1-201ENST00000321358 RNF213Q63HN8 5207 aa11.45□□□□□ -0.58
YBX1-201ENST00000321358 SEC61BP60468 96 aaKnown RBP11.44□□□□□ -0.58
YBX1-201ENST00000321358 Q75L30 129 aa11.44□□□□□ -0.58
YBX1-201ENST00000321358 MMP24-AS1A0A0U1RRL7 71 aa11.43□□□□□ -0.58
YBX1-201ENST00000321358 hDV103S1A0JD37 113 aa11.43□□□□□ -0.58
YBX1-201ENST00000321358 KRTAP16-1A8MUX0 517 aa11.42□□□□□ -0.58
YBX1-201ENST00000321358 RPL37P61927 97 aaKnown RBP11.42□□□□□ -0.58
YBX1-201ENST00000321358 C20orf166-AS1Q96NR2 134 aa11.42□□□□□ -0.58
YBX1-201ENST00000321358 A8MUU9 505 aa11.4□□□□□ -0.59
YBX1-201ENST00000321358 HIST1H4AP62805 103 aaKnown RBP11.4□□□□□ -0.59
YBX1-201ENST00000321358 CASC2Q6XLA1 102 aa11.4□□□□□ -0.59
YBX1-201ENST00000321358 TMEM254Q8TBM7 123 aa11.4□□□□□ -0.59
YBX1-201ENST00000321358 ATP11AUNQ6ZP68 121 aa11.39□□□□□ -0.59
YBX1-201ENST00000321358 HCG22E2RYF7 251 aa11.38□□□□□ -0.59
YBX1-201ENST00000321358 WFDC13Q8IUB5 93 aa11.38□□□□□ -0.59
YBX1-201ENST00000321358 MRPL34Q9BQ48 92 aaKnown RBP11.37□□□□□ -0.59
YBX1-201ENST00000321358 Q8N9P0 234 aaPredicted RBP11.34□□□□□ -0.59
YBX1-201ENST00000321358 NDUFS5O43920 106 aa11.32□□□□□ -0.6
YBX1-201ENST00000321358 PCOTHQ58A44 107 aa11.32□□□□□ -0.6
YBX1-201ENST00000321358 A0A087WVE0 104 aa11.23□□□□□ -0.61
YBX1-201ENST00000321358 MT-ATP8P03928 68 aa11.21□□□□□ -0.61
YBX1-201ENST00000321358 ZCCHC13Q8WW36 166 aaKnown RBP11.21□□□□□ -0.61
YBX1-201ENST00000321358 IMUPQ9GZP8 106 aa11.21□□□□□ -0.61
YBX1-201ENST00000321358 MUC17Q685J3 4493 aa11.19□□□□□ -0.62
YBX1-201ENST00000321358 TP53AIP1Q9HCN2 124 aa11.16□□□□□ -0.62
YBX1-201ENST00000321358 MUC2Q02817 5179 aa11.15□□□□□ -0.63
YBX1-201ENST00000321358 SCGB1A1P11684 91 aa11.09□□□□□ -0.63
YBX1-201ENST00000321358 KRTAP4-1Q9BYQ7 146 aa11.05□□□□□ -0.64
YBX1-201ENST00000321358 Q5W150 140 aa11.04□□□□□ -0.64
YBX1-201ENST00000321358 UQCRQO14949 82 aa11.02□□□□□ -0.65
YBX1-201ENST00000321358 SPINK7P58062 85 aa10.99□□□□□ -0.65
YBX1-201ENST00000321358 FAM236AA0A1B0GUQ0 79 aa10.99□□□□□ -0.65
YBX1-201ENST00000321358 FAM236BA0A1B0GV22 79 aa10.99□□□□□ -0.65
YBX1-201ENST00000321358 TRAV22A0A0B4J277 110 aa10.97□□□□□ -0.65
YBX1-201ENST00000321358 IGKV2D-30A0A075B6S6 120 aa10.95□□□□□ -0.66
YBX1-201ENST00000321358 A0A0U1RQV1 116 aa10.95□□□□□ -0.66
YBX1-201ENST00000321358 IGKV2-30P06310 120 aa10.95□□□□□ -0.66
YBX1-201ENST00000321358 OCR1Q9BZK8 76 aa10.94□□□□□ -0.66
YBX1-201ENST00000321358 C7orf65Q6ZTY9 151 aa10.94□□□□□ -0.66
YBX1-201ENST00000321358 ATOX1O00244 68 aa10.91□□□□□ -0.66
YBX1-201ENST00000321358 SMIM20Q8N5G0 67 aa10.91□□□□□ -0.66
YBX1-201ENST00000321358 H0Y9P7 68 aa10.89□□□□□ -0.67
YBX1-201ENST00000321358 MP68P56378 58 aa10.88□□□□□ -0.67
YBX1-201ENST00000321358 C5orf47Q569G3 176 aa10.88□□□□□ -0.67
YBX1-201ENST00000321358 FAT4Q6V0I7 4981 aa10.86□□□□□ -0.67
YBX1-201ENST00000321358 RBM12B-AS1Q9P1G2 102 aa10.85□□□□□ -0.67
YBX1-201ENST00000321358 LOC101927531A0A1B0GV80 90 aa10.84□□□□□ -0.67
YBX1-201ENST00000321358 TRAV7A0A075B6U4 112 aa10.83□□□□□ -0.68
YBX1-201ENST00000321358 HRES1P13985 223 aa10.83□□□□□ -0.68
YBX1-201ENST00000321358 COX6B2Q6YFQ2 88 aa10.83□□□□□ -0.68
YBX1-201ENST00000321358 C1orf64Q8NEQ6 169 aa10.79□□□□□ -0.68
YBX1-201ENST00000321358 LINC00208Q96KT6 92 aa10.79□□□□□ -0.68
YBX1-201ENST00000321358 FAM236DA0A1B0GTK5 79 aa10.78□□□□□ -0.68
YBX1-201ENST00000321358 FAM236CP0DP71 79 aa10.78□□□□□ -0.68
YBX1-201ENST00000321358 CYP4F30PQ9H0H9 118 aa10.78□□□□□ -0.68
YBX1-201ENST00000321358 H3BPC8 53 aa10.77□□□□□ -0.69
YBX1-201ENST00000321358 MPLKIPQ8TAP9 179 aa10.75□□□□□ -0.69
YBX1-201ENST00000321358 SERP2Q8N6R1 65 aa10.71□□□□□ -0.69
YBX1-201ENST00000321358 LCE2AQ5TA79 106 aaPredicted RBP10.7□□□□□ -0.7
YBX1-201ENST00000321358 KRTAP19-2Q3LHN2 52 aa10.69□□□□□ -0.7
YBX1-201ENST00000321358 C4orf26Q17RF5 130 aa10.67□□□□□ -0.7
YBX1-201ENST00000321358 LCE2CQ5TA81 110 aa10.63□□□□□ -0.71
YBX1-201ENST00000321358 KLKP1Q107X0 134 aa10.57□□□□□ -0.72
YBX1-201ENST00000321358 LCE2DQ5TA82 110 aaPredicted RBP10.57□□□□□ -0.72
YBX1-201ENST00000321358 ANAPC13Q9BS18 74 aa10.57□□□□□ -0.72
YBX1-201ENST00000321358 C20orf197Q8N268 126 aa10.56□□□□□ -0.72
YBX1-201ENST00000321358 COX7CP15954 63 aa10.55□□□□□ -0.72
YBX1-201ENST00000321358 H1FX-AS1Q4G0G2 97 aa10.54□□□□□ -0.72
YBX1-201ENST00000321358 SNURFQ9Y675 71 aa10.53□□□□□ -0.72
YBX1-201ENST00000321358 M0R2T5 61 aa10.5□□□□□ -0.73
YBX1-201ENST00000321358 MT1HP80294 61 aa10.5□□□□□ -0.73
YBX1-201ENST00000321358 FLGP20930 4061 aaPredicted RBP10.49□□□□□ -0.73
YBX1-201ENST00000321358 KRTAP3-1Q9BYR8 98 aa10.44□□□□□ -0.74
YBX1-201ENST00000321358 A8MUN3 132 aa10.43□□□□□ -0.74
YBX1-201ENST00000321358 KRTAP9-2Q9BYQ4 174 aa10.39□□□□□ -0.75
YBX1-201ENST00000321358 NDUFC1O43677 76 aa10.35□□□□□ -0.75
YBX1-201ENST00000321358 S4R3F8 94 aa10.34□□□□□ -0.75
YBX1-201ENST00000321358 DMAC1Q96GE9 116 aa10.31□□□□□ -0.76
YBX1-201ENST00000321358 SPANXA2-OT1Q8N9U9 137 aa10.3□□□□□ -0.76
YBX1-201ENST00000321358 CCDC179H3BU77 68 aa10.27□□□□□ -0.77
YBX1-201ENST00000321358 ACYP2P14621 99 aa10.25□□□□□ -0.77
YBX1-201ENST00000321358 LCA10Q71F78 164 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms