RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 LOC110117498A0A087WWA1 95 aa7.4□□□□□ -1.22
PPP1CA-201ENST00000312989 HRES1P13985 223 aa7.38□□□□□ -1.23
PPP1CA-201ENST00000312989 TSTD3H0UI37 97 aa7.37□□□□□ -1.23
PPP1CA-201ENST00000312989 C8orf87E5RJ46 101 aa7.36□□□□□ -1.23
PPP1CA-201ENST00000312989 JMJD7-PLA2G4BH0Y9G9 81 aa7.36□□□□□ -1.23
PPP1CA-201ENST00000312989 CRCT1Q9UGL9 99 aa7.36□□□□□ -1.23
PPP1CA-201ENST00000312989 J3KT08 172 aa7.34□□□□□ -1.23
PPP1CA-201ENST00000312989 C21orf62-AS1Q17RA5 79 aa7.34□□□□□ -1.23
PPP1CA-201ENST00000312989 KRTAP9-8Q9BYQ0 159 aa7.34□□□□□ -1.23
PPP1CA-201ENST00000312989 C14orf132Q9NPU4 83 aa7.34□□□□□ -1.23
PPP1CA-201ENST00000312989 TRBV20-1A0A075B6N2 111 aa7.33□□□□□ -1.24
PPP1CA-201ENST00000312989 A0A1B0GW54 56 aa7.33□□□□□ -1.24
PPP1CA-201ENST00000312989 TAX1BP3O14907 124 aa7.33□□□□□ -1.24
PPP1CA-201ENST00000312989 BATFQ16520 125 aa7.33□□□□□ -1.24
PPP1CA-201ENST00000312989 Q8N9P0 234 aaPredicted RBP7.33□□□□□ -1.24
PPP1CA-201ENST00000312989 IGKV3D-7A0A0C4DH55 119 aa7.31□□□□□ -1.24
PPP1CA-201ENST00000312989 C9orf118A6NHY6 69 aa7.31□□□□□ -1.24
PPP1CA-201ENST00000312989 USH2AO75445 5202 aa7.31□□□□□ -1.24
PPP1CA-201ENST00000312989 A8MWP4 228 aa7.3□□□□□ -1.24
PPP1CA-201ENST00000312989 PDE6GP18545 87 aa7.3□□□□□ -1.24
PPP1CA-201ENST00000312989 LYRM7Q5U5X0 104 aa7.29□□□□□ -1.24
PPP1CA-201ENST00000312989 ZCCHC13Q8WW36 166 aaKnown RBP7.29□□□□□ -1.24
PPP1CA-201ENST00000312989 A0A1W2PPM0 123 aa7.28□□□□□ -1.24
PPP1CA-201ENST00000312989 C8orf17Q9NRJ1 99 aa7.28□□□□□ -1.24
PPP1CA-201ENST00000312989 H3BT86 120 aa7.26□□□□□ -1.25
PPP1CA-201ENST00000312989 MTURNQ8N3F0 131 aa7.26□□□□□ -1.25
PPP1CA-201ENST00000312989 PRR15Q8IV56 129 aa7.23□□□□□ -1.25
PPP1CA-201ENST00000312989 SSPOA2VEC9 5147 aa7.23□□□□□ -1.25
PPP1CA-201ENST00000312989 NDUFB1O75438 58 aa7.22□□□□□ -1.25
PPP1CA-201ENST00000312989 MMP24-AS1A0A0U1RRL7 71 aa7.21□□□□□ -1.25
PPP1CA-201ENST00000312989 MT2AP02795 61 aa7.21□□□□□ -1.25
PPP1CA-201ENST00000312989 SPINK7P58062 85 aa7.21□□□□□ -1.25
PPP1CA-201ENST00000312989 SMCPP49901 116 aaPredicted RBP7.2□□□□□ -1.26
PPP1CA-201ENST00000312989 NREPQ16612 68 aa7.2□□□□□ -1.26
PPP1CA-201ENST00000312989 Q6ZVQ6 151 aa7.2□□□□□ -1.26
PPP1CA-201ENST00000312989 RBM12B-AS1Q9P1G2 102 aa7.2□□□□□ -1.26
PPP1CA-201ENST00000312989 K7EQZ3 153 aa7.19□□□□□ -1.26
PPP1CA-201ENST00000312989 FAM236DA0A1B0GTK5 79 aa7.18□□□□□ -1.26
PPP1CA-201ENST00000312989 FAM236CP0DP71 79 aa7.18□□□□□ -1.26
PPP1CA-201ENST00000312989 PCP4L1A6NKN8 68 aa7.17□□□□□ -1.26
PPP1CA-201ENST00000312989 MT1FP04733 61 aa7.17□□□□□ -1.26
PPP1CA-201ENST00000312989 TMEM254Q8TBM7 123 aa7.15□□□□□ -1.26
PPP1CA-201ENST00000312989 PRO0461Q9UI25 63 aa7.15□□□□□ -1.26
PPP1CA-201ENST00000312989 SPCS1Q9Y6A9 102 aa7.15□□□□□ -1.26
PPP1CA-201ENST00000312989 MRPL34Q9BQ48 92 aaKnown RBP7.14□□□□□ -1.27
PPP1CA-201ENST00000312989 KRTAP3-3Q9BYR6 98 aa7.11□□□□□ -1.27
PPP1CA-201ENST00000312989 KRTAP3-2Q9BYR7 98 aa7.11□□□□□ -1.27
PPP1CA-201ENST00000312989 COL5A1-AS1Q5SY13 56 aa7.1□□□□□ -1.27
PPP1CA-201ENST00000312989 WFDC13Q8IUB5 93 aa7.1□□□□□ -1.27
PPP1CA-201ENST00000312989 KRTAP9-3Q9BYQ3 159 aa7.1□□□□□ -1.27
PPP1CA-201ENST00000312989 hDV103S1A0JD37 113 aa7.09□□□□□ -1.27
PPP1CA-201ENST00000312989 LCE2BO14633 110 aa7.08□□□□□ -1.28
PPP1CA-201ENST00000312989 Q8N9L7 120 aa7.08□□□□□ -1.28
PPP1CA-201ENST00000312989 BPY2O14599 106 aa7.08□□□□□ -1.28
PPP1CA-201ENST00000312989 K7EP34 96 aa7.07□□□□□ -1.28
PPP1CA-201ENST00000312989 Q5W150 140 aa7.07□□□□□ -1.28
PPP1CA-201ENST00000312989 LINC00846Q9NV44 126 aa7.05□□□□□ -1.28
PPP1CA-201ENST00000312989 FCGBPQ9Y6R7 5405 aaPredicted RBP7.03□□□□□ -1.28
PPP1CA-201ENST00000312989 KRTAP10-10P60014 251 aa7.01□□□□□ -1.29
PPP1CA-201ENST00000312989 CASC2Q6XLA1 102 aa6.99□□□□□ -1.29
PPP1CA-201ENST00000312989 NDUFS5O43920 106 aa6.98□□□□□ -1.29
PPP1CA-201ENST00000312989 HCG22E2RYF7 251 aa6.95□□□□□ -1.3
PPP1CA-201ENST00000312989 IGKV2D-30A0A075B6S6 120 aa6.94□□□□□ -1.3
PPP1CA-201ENST00000312989 IGKV2-30P06310 120 aa6.94□□□□□ -1.3
PPP1CA-201ENST00000312989 H1FX-AS1Q4G0G2 97 aa6.94□□□□□ -1.3
PPP1CA-201ENST00000312989 C7orf65Q6ZTY9 151 aa6.94□□□□□ -1.3
PPP1CA-201ENST00000312989 UBL5Q9BZL1 73 aa6.93□□□□□ -1.3
PPP1CA-201ENST00000312989 KRTAP19-1Q8IUB9 90 aa6.91□□□□□ -1.3
PPP1CA-201ENST00000312989 CXCL6P80162 114 aa6.9□□□□□ -1.31
PPP1CA-201ENST00000312989 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.89□□□□□ -1.31
PPP1CA-201ENST00000312989 F8W1H4 67 aa6.89□□□□□ -1.31
PPP1CA-201ENST00000312989 ETDBQ3ZM63 59 aa6.89□□□□□ -1.31
PPP1CA-201ENST00000312989 GTF2H5Q6ZYL4 71 aa6.89□□□□□ -1.31
PPP1CA-201ENST00000312989 KRTAP3-1Q9BYR8 98 aa6.87□□□□□ -1.31
PPP1CA-201ENST00000312989 C4orf26Q17RF5 130 aa6.86□□□□□ -1.31
PPP1CA-201ENST00000312989 A0A1B0GV90 55 aa6.82□□□□□ -1.32
PPP1CA-201ENST00000312989 MACF1Q9UPN3 7388 aaKnown RBP6.8□□□□□ -1.32
PPP1CA-201ENST00000312989 KRTAP19-6Q3LI70 58 aa6.8□□□□□ -1.32
PPP1CA-201ENST00000312989 KRTAP9-7A8MTY7 169 aa6.77□□□□□ -1.33
PPP1CA-201ENST00000312989 SYNE2Q8WXH0 6885 aaKnown RBP6.76□□□□□ -1.33
PPP1CA-201ENST00000312989 TP53AIP1Q9HCN2 124 aa6.76□□□□□ -1.33
PPP1CA-201ENST00000312989 FAM240AA0A1B0GVK7 77 aa6.71□□□□□ -1.33
PPP1CA-201ENST00000312989 C1orf64Q8NEQ6 169 aa6.71□□□□□ -1.33
PPP1CA-201ENST00000312989 C5orf47Q569G3 176 aa6.69□□□□□ -1.34
PPP1CA-201ENST00000312989 LCA10Q71F78 164 aa6.69□□□□□ -1.34
PPP1CA-201ENST00000312989 ACYP1P07311 99 aa6.68□□□□□ -1.34
PPP1CA-201ENST00000312989 CYP4F30PQ9H0H9 118 aa6.68□□□□□ -1.34
PPP1CA-201ENST00000312989 S4R3F8 94 aa6.68□□□□□ -1.34
PPP1CA-201ENST00000312989 A0A087WVE0 104 aa6.64□□□□□ -1.35
PPP1CA-201ENST00000312989 ATP5EP2Q5VTU8 51 aa6.64□□□□□ -1.35
PPP1CA-201ENST00000312989 TRAV22A0A0B4J277 110 aa6.63□□□□□ -1.35
PPP1CA-201ENST00000312989 MT1BP07438 61 aa6.6□□□□□ -1.35
PPP1CA-201ENST00000312989 CSAG1Q6PB30 78 aa6.6□□□□□ -1.35
PPP1CA-201ENST00000312989 LOC101927531A0A1B0GV80 90 aa6.59□□□□□ -1.35
PPP1CA-201ENST00000312989 SPRR2GQ9BYE4 73 aa6.59□□□□□ -1.35
PPP1CA-201ENST00000312989 HIST1H4AP62805 103 aaKnown RBP6.57□□□□□ -1.36
PPP1CA-201ENST00000312989 KRTAP19-8Q3LI54 63 aa6.57□□□□□ -1.36
PPP1CA-201ENST00000312989 UQCRQO14949 82 aa6.56□□□□□ -1.36
PPP1CA-201ENST00000312989 LINC00643Q86TS7 51 aa6.55□□□□□ -1.36
PPP1CA-201ENST00000312989 FAM236AA0A1B0GUQ0 79 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 115.4 ms