RNA–Protein interactions for RNA: ENST00000302631.7

SCAMP3-201, Transcript of secretory carrier membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP3, Length 1,446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-201ENST00000302631 LINC00313P59037 77 aa10.83□□□□□ -0.68
SCAMP3-201ENST00000302631 UBL5Q9BZL1 73 aa10.83□□□□□ -0.68
SCAMP3-201ENST00000302631 FAM240AA0A1B0GVK7 77 aa10.82□□□□□ -0.68
SCAMP3-201ENST00000302631 NOTCH2NLQ7Z3S9 236 aa10.82□□□□□ -0.68
SCAMP3-201ENST00000302631 IGHV6-1A0A0B4J1U7 121 aa10.81□□□□□ -0.68
SCAMP3-201ENST00000302631 IGKV3D-7A0A0C4DH55 119 aa10.81□□□□□ -0.68
SCAMP3-201ENST00000302631 C8orf87E5RJ46 101 aa10.81□□□□□ -0.68
SCAMP3-201ENST00000302631 NDUFB1O75438 58 aa10.81□□□□□ -0.68
SCAMP3-201ENST00000302631 ACYP1P07311 99 aa10.81□□□□□ -0.68
SCAMP3-201ENST00000302631 KRTAP16-1A8MUX0 517 aa10.8□□□□□ -0.68
SCAMP3-201ENST00000302631 BPY2O14599 106 aa10.79□□□□□ -0.68
SCAMP3-201ENST00000302631 RPL37P61927 97 aaKnown RBP10.78□□□□□ -0.68
SCAMP3-201ENST00000302631 PRR15Q8IV56 129 aa10.78□□□□□ -0.68
SCAMP3-201ENST00000302631 Q75L30 129 aa10.77□□□□□ -0.68
SCAMP3-201ENST00000302631 C20orf166-AS1Q96NR2 134 aa10.77□□□□□ -0.68
SCAMP3-201ENST00000302631 SEC61BP60468 96 aaKnown RBP10.76□□□□□ -0.69
SCAMP3-201ENST00000302631 A8MUU9 505 aa10.75□□□□□ -0.69
SCAMP3-201ENST00000302631 RNF213Q63HN8 5207 aa10.75□□□□□ -0.69
SCAMP3-201ENST00000302631 K7EQZ3 153 aa10.73□□□□□ -0.69
SCAMP3-201ENST00000302631 C8orf17Q9NRJ1 99 aa10.73□□□□□ -0.69
SCAMP3-201ENST00000302631 MMP24-AS1A0A0U1RRL7 71 aa10.67□□□□□ -0.7
SCAMP3-201ENST00000302631 CXCL6P80162 114 aa10.67□□□□□ -0.7
SCAMP3-201ENST00000302631 PCOTHQ58A44 107 aa10.67□□□□□ -0.7
SCAMP3-201ENST00000302631 Q8N9L7 120 aa10.65□□□□□ -0.7
SCAMP3-201ENST00000302631 Q8N9P0 234 aaPredicted RBP10.65□□□□□ -0.7
SCAMP3-201ENST00000302631 J3QR89 54 aa10.64□□□□□ -0.71
SCAMP3-201ENST00000302631 KRTAP4-1Q9BYQ7 146 aa10.62□□□□□ -0.71
SCAMP3-201ENST00000302631 TMEM254Q8TBM7 123 aa10.61□□□□□ -0.71
SCAMP3-201ENST00000302631 ATP11AUNQ6ZP68 121 aa10.6□□□□□ -0.71
SCAMP3-201ENST00000302631 MUC2Q02817 5179 aa10.59□□□□□ -0.71
SCAMP3-201ENST00000302631 hDV103S1A0JD37 113 aa10.58□□□□□ -0.72
SCAMP3-201ENST00000302631 ATP5EP2Q5VTU8 51 aa10.58□□□□□ -0.72
SCAMP3-201ENST00000302631 MRPL34Q9BQ48 92 aaKnown RBP10.58□□□□□ -0.72
SCAMP3-201ENST00000302631 LINC00643Q86TS7 51 aa10.57□□□□□ -0.72
SCAMP3-201ENST00000302631 CASC2Q6XLA1 102 aa10.52□□□□□ -0.73
SCAMP3-201ENST00000302631 HCG22E2RYF7 251 aa10.51□□□□□ -0.73
SCAMP3-201ENST00000302631 WFDC13Q8IUB5 93 aa10.51□□□□□ -0.73
SCAMP3-201ENST00000302631 K7ERU9 68 aa10.49□□□□□ -0.73
SCAMP3-201ENST00000302631 ZCCHC13Q8WW36 166 aaKnown RBP10.48□□□□□ -0.73
SCAMP3-201ENST00000302631 NDUFS5O43920 106 aa10.4□□□□□ -0.75
SCAMP3-201ENST00000302631 HIST1H4AP62805 103 aaKnown RBP10.39□□□□□ -0.75
SCAMP3-201ENST00000302631 FAT4Q6V0I7 4981 aa10.36□□□□□ -0.75
SCAMP3-201ENST00000302631 KRTAP19-2Q3LHN2 52 aa10.34□□□□□ -0.75
SCAMP3-201ENST00000302631 Q5W150 140 aa10.34□□□□□ -0.75
SCAMP3-201ENST00000302631 A0A0U1RQV1 116 aa10.33□□□□□ -0.76
SCAMP3-201ENST00000302631 A0A087WVE0 104 aa10.33□□□□□ -0.76
SCAMP3-201ENST00000302631 TP53AIP1Q9HCN2 124 aa10.31□□□□□ -0.76
SCAMP3-201ENST00000302631 SPINK7P58062 85 aa10.27□□□□□ -0.77
SCAMP3-201ENST00000302631 LCE2CQ5TA81 110 aa10.27□□□□□ -0.77
SCAMP3-201ENST00000302631 IMUPQ9GZP8 106 aa10.27□□□□□ -0.77
SCAMP3-201ENST00000302631 HRES1P13985 223 aa10.26□□□□□ -0.77
SCAMP3-201ENST00000302631 MT-ATP8P03928 68 aa10.25□□□□□ -0.77
SCAMP3-201ENST00000302631 MPLKIPQ8TAP9 179 aa10.24□□□□□ -0.77
SCAMP3-201ENST00000302631 LCE2AQ5TA79 106 aaPredicted RBP10.16□□□□□ -0.78
SCAMP3-201ENST00000302631 UQCRQO14949 82 aa10.16□□□□□ -0.78
SCAMP3-201ENST00000302631 C7orf65Q6ZTY9 151 aa10.16□□□□□ -0.78
SCAMP3-201ENST00000302631 IGKV2-30P06310 120 aa10.14□□□□□ -0.79
SCAMP3-201ENST00000302631 OCR1Q9BZK8 76 aa10.14□□□□□ -0.79
SCAMP3-201ENST00000302631 IGKV2D-30A0A075B6S6 120 aa10.13□□□□□ -0.79
SCAMP3-201ENST00000302631 TRAV22A0A0B4J277 110 aa10.12□□□□□ -0.79
SCAMP3-201ENST00000302631 RBM12B-AS1Q9P1G2 102 aa10.11□□□□□ -0.79
SCAMP3-201ENST00000302631 COX6B2Q6YFQ2 88 aa10.1□□□□□ -0.79
SCAMP3-201ENST00000302631 FLGP20930 4061 aaPredicted RBP10.09□□□□□ -0.79
SCAMP3-201ENST00000302631 MT1HP80294 61 aa10.07□□□□□ -0.8
SCAMP3-201ENST00000302631 H0Y9P7 68 aa10.03□□□□□ -0.8
SCAMP3-201ENST00000302631 ATOX1O00244 68 aa10.03□□□□□ -0.8
SCAMP3-201ENST00000302631 SCGB1A1P11684 91 aa10.03□□□□□ -0.8
SCAMP3-201ENST00000302631 LOC101927531A0A1B0GV80 90 aa10.02□□□□□ -0.81
SCAMP3-201ENST00000302631 FAM236AA0A1B0GUQ0 79 aa10.01□□□□□ -0.81
SCAMP3-201ENST00000302631 FAM236BA0A1B0GV22 79 aa10.01□□□□□ -0.81
SCAMP3-201ENST00000302631 CYP4F30PQ9H0H9 118 aa10.01□□□□□ -0.81
SCAMP3-201ENST00000302631 FAM236DA0A1B0GTK5 79 aa9.99□□□□□ -0.81
SCAMP3-201ENST00000302631 FAM236CP0DP71 79 aa9.99□□□□□ -0.81
SCAMP3-201ENST00000302631 C5orf47Q569G3 176 aa9.99□□□□□ -0.81
SCAMP3-201ENST00000302631 SMIM20Q8N5G0 67 aa9.95□□□□□ -0.82
SCAMP3-201ENST00000302631 MP68P56378 58 aa9.93□□□□□ -0.82
SCAMP3-201ENST00000302631 H3BPC8 53 aa9.92□□□□□ -0.82
SCAMP3-201ENST00000302631 C4orf26Q17RF5 130 aa9.92□□□□□ -0.82
SCAMP3-201ENST00000302631 C1orf64Q8NEQ6 169 aa9.92□□□□□ -0.82
SCAMP3-201ENST00000302631 TRAV7A0A075B6U4 112 aa9.91□□□□□ -0.82
SCAMP3-201ENST00000302631 LINC00208Q96KT6 92 aa9.91□□□□□ -0.82
SCAMP3-201ENST00000302631 H1FX-AS1Q4G0G2 97 aa9.86□□□□□ -0.83
SCAMP3-201ENST00000302631 KRTAP3-1Q9BYR8 98 aa9.86□□□□□ -0.83
SCAMP3-201ENST00000302631 M0R2T5 61 aa9.82□□□□□ -0.84
SCAMP3-201ENST00000302631 KLKP1Q107X0 134 aa9.82□□□□□ -0.84
SCAMP3-201ENST00000302631 LORP23490 312 aaPredicted RBP9.79□□□□□ -0.84
SCAMP3-201ENST00000302631 KRTAP10-6P60371 365 aaPredicted RBP9.79□□□□□ -0.84
SCAMP3-201ENST00000302631 SERP2Q8N6R1 65 aa9.77□□□□□ -0.85
SCAMP3-201ENST00000302631 A8MUN3 132 aa9.65□□□□□ -0.86
SCAMP3-201ENST00000302631 KRTAP9-8Q9BYQ0 159 aa9.65□□□□□ -0.87
SCAMP3-201ENST00000302631 COX7CP15954 63 aa9.62□□□□□ -0.87
SCAMP3-201ENST00000302631 C20orf197Q8N268 126 aa9.62□□□□□ -0.87
SCAMP3-201ENST00000302631 SNURFQ9Y675 71 aa9.62□□□□□ -0.87
SCAMP3-201ENST00000302631 S4R3F8 94 aa9.62□□□□□ -0.87
SCAMP3-201ENST00000302631 LCA10Q71F78 164 aa9.59□□□□□ -0.87
SCAMP3-201ENST00000302631 DMAC1Q96GE9 116 aa9.56□□□□□ -0.88
SCAMP3-201ENST00000302631 KRTAP3-3Q9BYR6 98 aa9.56□□□□□ -0.88
SCAMP3-201ENST00000302631 MT2AP02795 61 aa9.52□□□□□ -0.89
SCAMP3-201ENST00000302631 ANAPC13Q9BS18 74 aa9.51□□□□□ -0.89
SCAMP3-201ENST00000302631 CSAG1Q6PB30 78 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 295.7 ms