RNA–Protein interactions for RNA: ENST00000296026.4

CXCL3-201, Transcript of C-X-C motif chemokine ligand 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL3, Length 1,075 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3-201ENST00000296026 HSD52Q0P140 79 aa9.68□□□□□ -0.86
CXCL3-201ENST00000296026 UBE2V1Q13404 147 aa9.68□□□□□ -0.86
CXCL3-201ENST00000296026 KRTAP9-3Q9BYQ3 159 aa9.68□□□□□ -0.86
CXCL3-201ENST00000296026 VPS25Q9BRG1 176 aa9.67□□□□□ -0.86
CXCL3-201ENST00000296026 A0A1B0GVX0 72 aa9.66□□□□□ -0.86
CXCL3-201ENST00000296026 C8orf87E5RJ46 101 aa9.66□□□□□ -0.86
CXCL3-201ENST00000296026 KRTAP19-1Q8IUB9 90 aa9.65□□□□□ -0.86
CXCL3-201ENST00000296026 MTURNQ8N3F0 131 aa9.63□□□□□ -0.87
CXCL3-201ENST00000296026 LOC100996750A0A140TA64 210 aa9.62□□□□□ -0.87
CXCL3-201ENST00000296026 KRTAP4-6Q9BYQ5 205 aa9.62□□□□□ -0.87
CXCL3-201ENST00000296026 RBM3P98179 157 aaKnown RBP9.61□□□□□ -0.87
CXCL3-201ENST00000296026 ZCCHC13Q8WW36 166 aaKnown RBP9.61□□□□□ -0.87
CXCL3-201ENST00000296026 FCGBPQ9Y6R7 5405 aaPredicted RBP9.59□□□□□ -0.87
CXCL3-201ENST00000296026 DSCR8Q96T75 97 aa9.59□□□□□ -0.87
CXCL3-201ENST00000296026 SPINK7P58062 85 aa9.58□□□□□ -0.88
CXCL3-201ENST00000296026 PYY3Q5JQD4 70 aa9.58□□□□□ -0.88
CXCL3-201ENST00000296026 J3KT08 172 aa9.56□□□□□ -0.88
CXCL3-201ENST00000296026 SCGB1C2P0DMR2 95 aa9.56□□□□□ -0.88
CXCL3-201ENST00000296026 C21orf62-AS1Q17RA5 79 aa9.53□□□□□ -0.88
CXCL3-201ENST00000296026 C9JAW5 83 aa9.52□□□□□ -0.89
CXCL3-201ENST00000296026 BAALC-AS2P0C853 105 aa9.51□□□□□ -0.89
CXCL3-201ENST00000296026 Q6ZQT0 140 aa9.51□□□□□ -0.89
CXCL3-201ENST00000296026 Q8N9P0 234 aaPredicted RBP9.51□□□□□ -0.89
CXCL3-201ENST00000296026 UQCR10Q9UDW1 63 aa9.51□□□□□ -0.89
CXCL3-201ENST00000296026 NDUFB1O75438 58 aa9.5□□□□□ -0.89
CXCL3-201ENST00000296026 LYRM7Q5U5X0 104 aa9.46□□□□□ -0.9
CXCL3-201ENST00000296026 WFDC13Q8IUB5 93 aa9.46□□□□□ -0.9
CXCL3-201ENST00000296026 C8orf17Q9NRJ1 99 aa9.45□□□□□ -0.9
CXCL3-201ENST00000296026 A8MWP4 228 aa9.43□□□□□ -0.9
CXCL3-201ENST00000296026 LINC00846Q9NV44 126 aa9.42□□□□□ -0.9
CXCL3-201ENST00000296026 IGKV3D-7A0A0C4DH55 119 aa9.4□□□□□ -0.9
CXCL3-201ENST00000296026 KRTAP19-6Q3LI70 58 aa9.4□□□□□ -0.9
CXCL3-201ENST00000296026 JMJD7-PLA2G4BH0Y9G9 81 aa9.39□□□□□ -0.91
CXCL3-201ENST00000296026 A0A1B0GW54 56 aa9.38□□□□□ -0.91
CXCL3-201ENST00000296026 LOC110117498A0A087WWA1 95 aa9.37□□□□□ -0.91
CXCL3-201ENST00000296026 Q6ZVQ6 151 aa9.37□□□□□ -0.91
CXCL3-201ENST00000296026 ATXN8Q156A1 80 aa9.35□□□□□ -0.91
CXCL3-201ENST00000296026 NAA38Q9BRA0 125 aaKnown RBP9.33□□□□□ -0.92
CXCL3-201ENST00000296026 PDE6GP18545 87 aa9.32□□□□□ -0.92
CXCL3-201ENST00000296026 PRR15Q8IV56 129 aa9.32□□□□□ -0.92
CXCL3-201ENST00000296026 C14orf132Q9NPU4 83 aa9.31□□□□□ -0.92
CXCL3-201ENST00000296026 TMA7Q9Y2S6 64 aaKnown RBP9.29□□□□□ -0.92
CXCL3-201ENST00000296026 MACF1Q9UPN3 7388 aaKnown RBP9.28□□□□□ -0.92
CXCL3-201ENST00000296026 NREPQ16612 68 aa9.28□□□□□ -0.92
CXCL3-201ENST00000296026 MRPL34Q9BQ48 92 aaKnown RBP9.28□□□□□ -0.92
CXCL3-201ENST00000296026 MMP24-AS1A0A0U1RRL7 71 aa9.27□□□□□ -0.93
CXCL3-201ENST00000296026 H1FX-AS1Q4G0G2 97 aa9.27□□□□□ -0.93
CXCL3-201ENST00000296026 TMEM254Q8TBM7 123 aa9.27□□□□□ -0.93
CXCL3-201ENST00000296026 M0R143 59 aa9.25□□□□□ -0.93
CXCL3-201ENST00000296026 SYNE2Q8WXH0 6885 aaKnown RBP9.22□□□□□ -0.93
CXCL3-201ENST00000296026 hDV103S1A0JD37 113 aa9.21□□□□□ -0.94
CXCL3-201ENST00000296026 NDUFS5O43920 106 aa9.21□□□□□ -0.94
CXCL3-201ENST00000296026 K7EQZ3 153 aa9.19□□□□□ -0.94
CXCL3-201ENST00000296026 IGKV2D-30A0A075B6S6 120 aa9.16□□□□□ -0.94
CXCL3-201ENST00000296026 IGKV2-30P06310 120 aa9.16□□□□□ -0.94
CXCL3-201ENST00000296026 Q5W150 140 aa9.12□□□□□ -0.95
CXCL3-201ENST00000296026 C7orf65Q6ZTY9 151 aa9.12□□□□□ -0.95
CXCL3-201ENST00000296026 KRTAP6-3Q3LI67 103 aa9.11□□□□□ -0.95
CXCL3-201ENST00000296026 BPY2O14599 106 aa9.08□□□□□ -0.96
CXCL3-201ENST00000296026 H3BT86 120 aa9.04□□□□□ -0.96
CXCL3-201ENST00000296026 BATFQ16520 125 aa9.03□□□□□ -0.96
CXCL3-201ENST00000296026 C4orf26Q17RF5 130 aa9.03□□□□□ -0.96
CXCL3-201ENST00000296026 CASC2Q6XLA1 102 aa9.02□□□□□ -0.97
CXCL3-201ENST00000296026 HCG22E2RYF7 251 aa9.01□□□□□ -0.97
CXCL3-201ENST00000296026 Q8N9L7 120 aa9.01□□□□□ -0.97
CXCL3-201ENST00000296026 C9orf118A6NHY6 69 aa8.96□□□□□ -0.98
CXCL3-201ENST00000296026 TSTD3H0UI37 97 aa8.96□□□□□ -0.98
CXCL3-201ENST00000296026 SMIM6P0DI80 62 aa8.96□□□□□ -0.98
CXCL3-201ENST00000296026 C5orf47Q569G3 176 aa8.96□□□□□ -0.98
CXCL3-201ENST00000296026 FAM236AA0A1B0GUQ0 79 aa8.94□□□□□ -0.98
CXCL3-201ENST00000296026 FAM236BA0A1B0GV22 79 aa8.94□□□□□ -0.98
CXCL3-201ENST00000296026 CXCL6P80162 114 aa8.94□□□□□ -0.98
CXCL3-201ENST00000296026 A0A1W2PPM0 123 aa8.93□□□□□ -0.98
CXCL3-201ENST00000296026 TAX1BP3O14907 124 aa8.9□□□□□ -0.98
CXCL3-201ENST00000296026 A6NN06 94 aa8.88□□□□□ -0.99
CXCL3-201ENST00000296026 KRTAP3-1Q9BYR8 98 aa8.88□□□□□ -0.99
CXCL3-201ENST00000296026 MT1BP07438 61 aa8.87□□□□□ -0.99
CXCL3-201ENST00000296026 S4R3F8 94 aa8.87□□□□□ -0.99
CXCL3-201ENST00000296026 Q5VV11 94 aa8.84□□□□□ -0.99
CXCL3-201ENST00000296026 CSAG1Q6PB30 78 aa8.84□□□□□ -0.99
CXCL3-201ENST00000296026 C1orf64Q8NEQ6 169 aa8.82□□□□□ -1
CXCL3-201ENST00000296026 KRTAP19-8Q3LI54 63 aa8.81□□□□□ -1
CXCL3-201ENST00000296026 LCA10Q71F78 164 aa8.81□□□□□ -1
CXCL3-201ENST00000296026 SPRR2GQ9BYE4 73 aa8.81□□□□□ -1
CXCL3-201ENST00000296026 UBL5Q9BZL1 73 aa8.79□□□□□ -1
CXCL3-201ENST00000296026 SPCS1Q9Y6A9 102 aa8.79□□□□□ -1
CXCL3-201ENST00000296026 KRTAP4-8Q9BYQ9 185 aa8.78□□□□□ -1
CXCL3-201ENST00000296026 KRTAP10-5P60370 271 aa8.72□□□□□ -1.01
CXCL3-201ENST00000296026 KLKP1Q107X0 134 aa8.71□□□□□ -1.02
CXCL3-201ENST00000296026 TP53AIP1Q9HCN2 124 aa8.69□□□□□ -1.02
CXCL3-201ENST00000296026 NEBP20929 6669 aa8.68□□□□□ -1.02
CXCL3-201ENST00000296026 PRO0461Q9UI25 63 aa8.66□□□□□ -1.02
CXCL3-201ENST00000296026 MUC12Q9UKN1 5478 aa8.61□□□□□ -1.03
CXCL3-201ENST00000296026 LOC105371267A0A1B0GV96 52 aa8.59□□□□□ -1.03
CXCL3-201ENST00000296026 KRTAP5-9P26371 169 aa8.58□□□□□ -1.04
CXCL3-201ENST00000296026 CYP4F30PQ9H0H9 118 aa8.58□□□□□ -1.04
CXCL3-201ENST00000296026 K7EP34 96 aa8.57□□□□□ -1.04
CXCL3-201ENST00000296026 KRTAP20-1Q3LI63 56 aa8.57□□□□□ -1.04
CXCL3-201ENST00000296026 A0A087WVE0 104 aa8.56□□□□□ -1.04
CXCL3-201ENST00000296026 CRIPTQ9P021 101 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms