RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 UQCR10Q9UDW1 63 aa12.53□□□□□ -0.4
U2AF1-201ENST00000291552 MT1FP04733 61 aa12.52□□□□□ -0.41
U2AF1-201ENST00000291552 RBM12B-AS1Q9P1G2 102 aa12.52□□□□□ -0.41
U2AF1-201ENST00000291552 C8orf87E5RJ46 101 aa12.5□□□□□ -0.41
U2AF1-201ENST00000291552 RBM3P98179 157 aaKnown RBP12.49□□□□□ -0.41
U2AF1-201ENST00000291552 FCGBPQ9Y6R7 5405 aaPredicted RBP12.48□□□□□ -0.41
U2AF1-201ENST00000291552 KRTAP9-1A8MXZ3 250 aaPredicted RBP12.46□□□□□ -0.41
U2AF1-201ENST00000291552 SCGB1C2P0DMR2 95 aa12.45□□□□□ -0.42
U2AF1-201ENST00000291552 DSCR8Q96T75 97 aa12.44□□□□□ -0.42
U2AF1-201ENST00000291552 BAALC-AS2P0C853 105 aa12.41□□□□□ -0.42
U2AF1-201ENST00000291552 ZCCHC13Q8WW36 166 aaKnown RBP12.41□□□□□ -0.42
U2AF1-201ENST00000291552 KRTAP9-3Q9BYQ3 159 aa12.41□□□□□ -0.42
U2AF1-201ENST00000291552 Q6ZQT0 140 aa12.39□□□□□ -0.43
U2AF1-201ENST00000291552 C9JAW5 83 aa12.38□□□□□ -0.43
U2AF1-201ENST00000291552 TMA7Q9Y2S6 64 aaKnown RBP12.38□□□□□ -0.43
U2AF1-201ENST00000291552 J3KT08 172 aa12.37□□□□□ -0.43
U2AF1-201ENST00000291552 KRTAP10-10P60014 251 aa12.36□□□□□ -0.43
U2AF1-201ENST00000291552 KRTAP9-7A8MTY7 169 aa12.35□□□□□ -0.43
U2AF1-201ENST00000291552 SPINK7P58062 85 aa12.34□□□□□ -0.43
U2AF1-201ENST00000291552 Q8N9P0 234 aaPredicted RBP12.33□□□□□ -0.44
U2AF1-201ENST00000291552 C21orf62-AS1Q17RA5 79 aa12.32□□□□□ -0.44
U2AF1-201ENST00000291552 NAA38Q9BRA0 125 aaKnown RBP12.3□□□□□ -0.44
U2AF1-201ENST00000291552 KRTAP19-1Q8IUB9 90 aa12.29□□□□□ -0.44
U2AF1-201ENST00000291552 C8orf17Q9NRJ1 99 aa12.27□□□□□ -0.45
U2AF1-201ENST00000291552 MTURNQ8N3F0 131 aa12.26□□□□□ -0.45
U2AF1-201ENST00000291552 LOC110117498A0A087WWA1 95 aa12.25□□□□□ -0.45
U2AF1-201ENST00000291552 A8MWP4 228 aa12.25□□□□□ -0.45
U2AF1-201ENST00000291552 NDUFB1O75438 58 aa12.25□□□□□ -0.45
U2AF1-201ENST00000291552 IGKV3D-7A0A0C4DH55 119 aa12.24□□□□□ -0.45
U2AF1-201ENST00000291552 ATXN8Q156A1 80 aa12.23□□□□□ -0.45
U2AF1-201ENST00000291552 JMJD7-PLA2G4BH0Y9G9 81 aa12.21□□□□□ -0.45
U2AF1-201ENST00000291552 WFDC13Q8IUB5 93 aa12.19□□□□□ -0.46
U2AF1-201ENST00000291552 A0A1B0GW54 56 aa12.18□□□□□ -0.46
U2AF1-201ENST00000291552 M0R143 59 aa12.17□□□□□ -0.46
U2AF1-201ENST00000291552 C14orf132Q9NPU4 83 aa12.17□□□□□ -0.46
U2AF1-201ENST00000291552 Q6ZVQ6 151 aa12.15□□□□□ -0.46
U2AF1-201ENST00000291552 PDE6GP18545 87 aa12.13□□□□□ -0.47
U2AF1-201ENST00000291552 LYRM7Q5U5X0 104 aa12.12□□□□□ -0.47
U2AF1-201ENST00000291552 PRR15Q8IV56 129 aa12.12□□□□□ -0.47
U2AF1-201ENST00000291552 MMP24-AS1A0A0U1RRL7 71 aa12.1□□□□□ -0.47
U2AF1-201ENST00000291552 MACF1Q9UPN3 7388 aaKnown RBP12.07□□□□□ -0.48
U2AF1-201ENST00000291552 NREPQ16612 68 aa12.04□□□□□ -0.48
U2AF1-201ENST00000291552 TMEM254Q8TBM7 123 aa12.04□□□□□ -0.48
U2AF1-201ENST00000291552 MRPL34Q9BQ48 92 aaKnown RBP12.03□□□□□ -0.48
U2AF1-201ENST00000291552 KRTAP19-6Q3LI70 58 aa12□□□□□ -0.49
U2AF1-201ENST00000291552 K7EQZ3 153 aa11.99□□□□□ -0.49
U2AF1-201ENST00000291552 SYNE2Q8WXH0 6885 aaKnown RBP11.99□□□□□ -0.49
U2AF1-201ENST00000291552 SMIM6P0DI80 62 aa11.95□□□□□ -0.5
U2AF1-201ENST00000291552 hDV103S1A0JD37 113 aa11.94□□□□□ -0.5
U2AF1-201ENST00000291552 BATFQ16520 125 aa11.91□□□□□ -0.5
U2AF1-201ENST00000291552 H1FX-AS1Q4G0G2 97 aa11.91□□□□□ -0.5
U2AF1-201ENST00000291552 NDUFS5O43920 106 aa11.89□□□□□ -0.51
U2AF1-201ENST00000291552 H3BT86 120 aa11.88□□□□□ -0.51
U2AF1-201ENST00000291552 Q5W150 140 aa11.87□□□□□ -0.51
U2AF1-201ENST00000291552 IGKV2D-30A0A075B6S6 120 aa11.84□□□□□ -0.51
U2AF1-201ENST00000291552 IGKV2-30P06310 120 aa11.84□□□□□ -0.51
U2AF1-201ENST00000291552 LINC00846Q9NV44 126 aa11.83□□□□□ -0.52
U2AF1-201ENST00000291552 C9orf118A6NHY6 69 aa11.82□□□□□ -0.52
U2AF1-201ENST00000291552 BPY2O14599 106 aa11.81□□□□□ -0.52
U2AF1-201ENST00000291552 TAX1BP3O14907 124 aa11.81□□□□□ -0.52
U2AF1-201ENST00000291552 TSTD3H0UI37 97 aa11.8□□□□□ -0.52
U2AF1-201ENST00000291552 A0A1W2PPM0 123 aa11.79□□□□□ -0.52
U2AF1-201ENST00000291552 C7orf65Q6ZTY9 151 aa11.79□□□□□ -0.52
U2AF1-201ENST00000291552 Q8N9L7 120 aa11.79□□□□□ -0.52
U2AF1-201ENST00000291552 CASC2Q6XLA1 102 aa11.72□□□□□ -0.53
U2AF1-201ENST00000291552 HCG22E2RYF7 251 aa11.7□□□□□ -0.54
U2AF1-201ENST00000291552 C4orf26Q17RF5 130 aa11.67□□□□□ -0.54
U2AF1-201ENST00000291552 CXCL6P80162 114 aa11.6□□□□□ -0.55
U2AF1-201ENST00000291552 SPCS1Q9Y6A9 102 aa11.59□□□□□ -0.55
U2AF1-201ENST00000291552 LOC105371267A0A1B0GV96 52 aa11.57□□□□□ -0.56
U2AF1-201ENST00000291552 KRTAP3-1Q9BYR8 98 aa11.57□□□□□ -0.56
U2AF1-201ENST00000291552 KRTAP6-3Q3LI67 103 aa11.54□□□□□ -0.56
U2AF1-201ENST00000291552 C5orf47Q569G3 176 aa11.53□□□□□ -0.56
U2AF1-201ENST00000291552 H3BS24 57 aa11.52□□□□□ -0.57
U2AF1-201ENST00000291552 PRO0461Q9UI25 63 aa11.51□□□□□ -0.57
U2AF1-201ENST00000291552 UBL5Q9BZL1 73 aa11.46□□□□□ -0.57
U2AF1-201ENST00000291552 S4R3F8 94 aa11.44□□□□□ -0.58
U2AF1-201ENST00000291552 MT1BP07438 61 aa11.43□□□□□ -0.58
U2AF1-201ENST00000291552 FAM236AA0A1B0GUQ0 79 aa11.41□□□□□ -0.58
U2AF1-201ENST00000291552 FAM236BA0A1B0GV22 79 aa11.41□□□□□ -0.58
U2AF1-201ENST00000291552 C1orf64Q8NEQ6 169 aa11.4□□□□□ -0.58
U2AF1-201ENST00000291552 LCA10Q71F78 164 aa11.39□□□□□ -0.59
U2AF1-201ENST00000291552 K7EP34 96 aa11.37□□□□□ -0.59
U2AF1-201ENST00000291552 NEBP20929 6669 aa11.37□□□□□ -0.59
U2AF1-201ENST00000291552 CSAG1Q6PB30 78 aa11.35□□□□□ -0.59
U2AF1-201ENST00000291552 SPRR2GQ9BYE4 73 aa11.35□□□□□ -0.59
U2AF1-201ENST00000291552 KRTAP19-8Q3LI54 63 aa11.34□□□□□ -0.59
U2AF1-201ENST00000291552 COL5A1-AS1Q5SY13 56 aa11.33□□□□□ -0.6
U2AF1-201ENST00000291552 A6NN06 94 aa11.3□□□□□ -0.6
U2AF1-201ENST00000291552 Q5VV11 94 aa11.3□□□□□ -0.6
U2AF1-201ENST00000291552 TP53AIP1Q9HCN2 124 aa11.28□□□□□ -0.6
U2AF1-201ENST00000291552 MUC12Q9UKN1 5478 aa11.28□□□□□ -0.6
U2AF1-201ENST00000291552 KLKP1Q107X0 134 aa11.2□□□□□ -0.62
U2AF1-201ENST00000291552 KRTAP10-5P60370 271 aa11.18□□□□□ -0.62
U2AF1-201ENST00000291552 A0A087WVE0 104 aa11.16□□□□□ -0.62
U2AF1-201ENST00000291552 CYP4F30PQ9H0H9 118 aa11.16□□□□□ -0.62
U2AF1-201ENST00000291552 ETDBQ3ZM63 59 aa11.13□□□□□ -0.63
U2AF1-201ENST00000291552 GTF2H5Q6ZYL4 71 aa11.1□□□□□ -0.63
U2AF1-201ENST00000291552 F8W1H4 67 aa11.08□□□□□ -0.64
U2AF1-201ENST00000291552 TRAV22A0A0B4J277 110 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms