RNA–Protein interactions for RNA: ENST00000291525.11

TFF3-201, Transcript of trefoil factor 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TFF3, Length 407 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-201ENST00000291525 UQCR10Q9UDW1 63 aa8.66□□□□□ -1.02
TFF3-201ENST00000291525 J3KT08 172 aa8.64□□□□□ -1.03
TFF3-201ENST00000291525 MT2AP02795 61 aa8.64□□□□□ -1.03
TFF3-201ENST00000291525 C9JAW5 83 aa8.61□□□□□ -1.03
TFF3-201ENST00000291525 ZCCHC13Q8WW36 166 aaKnown RBP8.6□□□□□ -1.03
TFF3-201ENST00000291525 NDUFB1O75438 58 aa8.59□□□□□ -1.03
TFF3-201ENST00000291525 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.58□□□□□ -1.04
TFF3-201ENST00000291525 BAALC-AS2P0C853 105 aa8.58□□□□□ -1.04
TFF3-201ENST00000291525 KRTAP10-10P60014 251 aa8.57□□□□□ -1.04
TFF3-201ENST00000291525 MT1FP04733 61 aa8.56□□□□□ -1.04
TFF3-201ENST00000291525 Q6ZQT0 140 aa8.55□□□□□ -1.04
TFF3-201ENST00000291525 KRTAP9-7A8MTY7 169 aa8.54□□□□□ -1.04
TFF3-201ENST00000291525 SPINK7P58062 85 aa8.54□□□□□ -1.04
TFF3-201ENST00000291525 USH2AO75445 5202 aa8.54□□□□□ -1.04
TFF3-201ENST00000291525 A0A1B0GW54 56 aa8.51□□□□□ -1.05
TFF3-201ENST00000291525 JMJD7-PLA2G4BH0Y9G9 81 aa8.51□□□□□ -1.05
TFF3-201ENST00000291525 LYRM7Q5U5X0 104 aa8.51□□□□□ -1.05
TFF3-201ENST00000291525 Q8N9P0 234 aaPredicted RBP8.51□□□□□ -1.05
TFF3-201ENST00000291525 KRTAP9-3Q9BYQ3 159 aa8.5□□□□□ -1.05
TFF3-201ENST00000291525 SSPOA2VEC9 5147 aa8.49□□□□□ -1.05
TFF3-201ENST00000291525 ATXN8Q156A1 80 aa8.49□□□□□ -1.05
TFF3-201ENST00000291525 A8MWP4 228 aa8.48□□□□□ -1.05
TFF3-201ENST00000291525 LCE2BO14633 110 aa8.48□□□□□ -1.05
TFF3-201ENST00000291525 PDE6GP18545 87 aa8.48□□□□□ -1.05
TFF3-201ENST00000291525 C8orf17Q9NRJ1 99 aa8.48□□□□□ -1.05
TFF3-201ENST00000291525 TMA7Q9Y2S6 64 aaKnown RBP8.47□□□□□ -1.05
TFF3-201ENST00000291525 LOC110117498A0A087WWA1 95 aa8.46□□□□□ -1.06
TFF3-201ENST00000291525 M0R143 59 aa8.46□□□□□ -1.06
TFF3-201ENST00000291525 WFDC13Q8IUB5 93 aa8.44□□□□□ -1.06
TFF3-201ENST00000291525 KRTAP19-1Q8IUB9 90 aa8.44□□□□□ -1.06
TFF3-201ENST00000291525 IGKV3D-7A0A0C4DH55 119 aa8.42□□□□□ -1.06
TFF3-201ENST00000291525 Q6ZVQ6 151 aa8.42□□□□□ -1.06
TFF3-201ENST00000291525 LINC00846Q9NV44 126 aa8.41□□□□□ -1.06
TFF3-201ENST00000291525 NAA38Q9BRA0 125 aaKnown RBP8.39□□□□□ -1.07
TFF3-201ENST00000291525 C14orf132Q9NPU4 83 aa8.39□□□□□ -1.07
TFF3-201ENST00000291525 NREPQ16612 68 aa8.38□□□□□ -1.07
TFF3-201ENST00000291525 PRR15Q8IV56 129 aa8.38□□□□□ -1.07
TFF3-201ENST00000291525 FCGBPQ9Y6R7 5405 aaPredicted RBP8.35□□□□□ -1.07
TFF3-201ENST00000291525 TMEM254Q8TBM7 123 aa8.35□□□□□ -1.07
TFF3-201ENST00000291525 MRPL34Q9BQ48 92 aaKnown RBP8.34□□□□□ -1.07
TFF3-201ENST00000291525 MMP24-AS1A0A0U1RRL7 71 aa8.31□□□□□ -1.08
TFF3-201ENST00000291525 hDV103S1A0JD37 113 aa8.29□□□□□ -1.08
TFF3-201ENST00000291525 NDUFS5O43920 106 aa8.29□□□□□ -1.08
TFF3-201ENST00000291525 H1FX-AS1Q4G0G2 97 aa8.27□□□□□ -1.09
TFF3-201ENST00000291525 KRTAP19-6Q3LI70 58 aa8.26□□□□□ -1.09
TFF3-201ENST00000291525 K7EQZ3 153 aa8.24□□□□□ -1.09
TFF3-201ENST00000291525 SMIM6P0DI80 62 aa8.23□□□□□ -1.09
TFF3-201ENST00000291525 H3BT86 120 aa8.22□□□□□ -1.09
TFF3-201ENST00000291525 BPY2O14599 106 aa8.21□□□□□ -1.1
TFF3-201ENST00000291525 BATFQ16520 125 aa8.21□□□□□ -1.1
TFF3-201ENST00000291525 C7orf65Q6ZTY9 151 aa8.21□□□□□ -1.1
TFF3-201ENST00000291525 IGKV2D-30A0A075B6S6 120 aa8.2□□□□□ -1.1
TFF3-201ENST00000291525 IGKV2-30P06310 120 aa8.2□□□□□ -1.1
TFF3-201ENST00000291525 TSTD3H0UI37 97 aa8.19□□□□□ -1.1
TFF3-201ENST00000291525 MACF1Q9UPN3 7388 aaKnown RBP8.18□□□□□ -1.1
TFF3-201ENST00000291525 C9orf118A6NHY6 69 aa8.14□□□□□ -1.11
TFF3-201ENST00000291525 CASC2Q6XLA1 102 aa8.13□□□□□ -1.11
TFF3-201ENST00000291525 Q5W150 140 aa8.12□□□□□ -1.11
TFF3-201ENST00000291525 A0A1W2PPM0 123 aa8.11□□□□□ -1.11
TFF3-201ENST00000291525 HCG22E2RYF7 251 aa8.11□□□□□ -1.11
TFF3-201ENST00000291525 CXCL6P80162 114 aa8.08□□□□□ -1.12
TFF3-201ENST00000291525 TAX1BP3O14907 124 aa8.07□□□□□ -1.12
TFF3-201ENST00000291525 Q8N9L7 120 aa8.07□□□□□ -1.12
TFF3-201ENST00000291525 SYNE2Q8WXH0 6885 aaKnown RBP8.05□□□□□ -1.12
TFF3-201ENST00000291525 C4orf26Q17RF5 130 aa8.05□□□□□ -1.12
TFF3-201ENST00000291525 UBL5Q9BZL1 73 aa8□□□□□ -1.13
TFF3-201ENST00000291525 SPCS1Q9Y6A9 102 aa8□□□□□ -1.13
TFF3-201ENST00000291525 FAM236AA0A1B0GUQ0 79 aa7.99□□□□□ -1.13
TFF3-201ENST00000291525 FAM236BA0A1B0GV22 79 aa7.99□□□□□ -1.13
TFF3-201ENST00000291525 KRTAP6-3Q3LI67 103 aa7.98□□□□□ -1.13
TFF3-201ENST00000291525 C5orf47Q569G3 176 aa7.98□□□□□ -1.13
TFF3-201ENST00000291525 S4R3F8 94 aa7.96□□□□□ -1.14
TFF3-201ENST00000291525 SMCPP49901 116 aaPredicted RBP7.92□□□□□ -1.14
TFF3-201ENST00000291525 CSAG1Q6PB30 78 aa7.92□□□□□ -1.14
TFF3-201ENST00000291525 C1orf64Q8NEQ6 169 aa7.91□□□□□ -1.14
TFF3-201ENST00000291525 KRTAP3-1Q9BYR8 98 aa7.88□□□□□ -1.15
TFF3-201ENST00000291525 TP53AIP1Q9HCN2 124 aa7.88□□□□□ -1.15
TFF3-201ENST00000291525 Q5VV11 94 aa7.87□□□□□ -1.15
TFF3-201ENST00000291525 A6NN06 94 aa7.86□□□□□ -1.15
TFF3-201ENST00000291525 LCA10Q71F78 164 aa7.85□□□□□ -1.15
TFF3-201ENST00000291525 LOC105371267A0A1B0GV96 52 aa7.84□□□□□ -1.15
TFF3-201ENST00000291525 COL5A1-AS1Q5SY13 56 aa7.84□□□□□ -1.15
TFF3-201ENST00000291525 PRO0461Q9UI25 63 aa7.84□□□□□ -1.15
TFF3-201ENST00000291525 K7EP34 96 aa7.82□□□□□ -1.16
TFF3-201ENST00000291525 SPRR2GQ9BYE4 73 aa7.82□□□□□ -1.16
TFF3-201ENST00000291525 MT1BP07438 61 aa7.8□□□□□ -1.16
TFF3-201ENST00000291525 KRTAP19-8Q3LI54 63 aa7.79□□□□□ -1.16
TFF3-201ENST00000291525 KLKP1Q107X0 134 aa7.77□□□□□ -1.17
TFF3-201ENST00000291525 GTF2H5Q6ZYL4 71 aa7.73□□□□□ -1.17
TFF3-201ENST00000291525 CYP4F30PQ9H0H9 118 aa7.71□□□□□ -1.18
TFF3-201ENST00000291525 KRTAP10-5P60370 271 aa7.7□□□□□ -1.18
TFF3-201ENST00000291525 CRIPTQ9P021 101 aa7.69□□□□□ -1.18
TFF3-201ENST00000291525 TRAV22A0A0B4J277 110 aa7.68□□□□□ -1.18
TFF3-201ENST00000291525 F8W1H4 67 aa7.68□□□□□ -1.18
TFF3-201ENST00000291525 KRTAP3-3Q9BYR6 98 aa7.68□□□□□ -1.18
TFF3-201ENST00000291525 LOC101927531A0A1B0GV80 90 aa7.67□□□□□ -1.18
TFF3-201ENST00000291525 ETDBQ3ZM63 59 aa7.65□□□□□ -1.18
TFF3-201ENST00000291525 IMUPQ9GZP8 106 aa7.63□□□□□ -1.19
TFF3-201ENST00000291525 NEBP20929 6669 aa7.61□□□□□ -1.19
TFF3-201ENST00000291525 A0A087WVE0 104 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms