RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 C8orf87E5RJ46 101 aa12.78□□□□□ -0.36
SDF2L1-201ENST00000248958 KRTAP19-2Q3LHN2 52 aa12.77□□□□□ -0.37
SDF2L1-201ENST00000248958 COL5A1-AS1Q5SY13 56 aa12.77□□□□□ -0.37
SDF2L1-201ENST00000248958 KRTAP9-6A0A140TA67 174 aa12.76□□□□□ -0.37
SDF2L1-201ENST00000248958 A0A1B0GVX0 72 aa12.76□□□□□ -0.37
SDF2L1-201ENST00000248958 KRTAP16-1A8MUX0 517 aa12.76□□□□□ -0.37
SDF2L1-201ENST00000248958 LCE2CQ5TA81 110 aa12.76□□□□□ -0.37
SDF2L1-201ENST00000248958 SPCS1Q9Y6A9 102 aa12.75□□□□□ -0.37
SDF2L1-201ENST00000248958 NOTCH2NLQ7Z3S9 236 aa12.73□□□□□ -0.37
SDF2L1-201ENST00000248958 NDUFB1O75438 58 aa12.72□□□□□ -0.37
SDF2L1-201ENST00000248958 MTURNQ8N3F0 131 aa12.71□□□□□ -0.37
SDF2L1-201ENST00000248958 NREPQ16612 68 aa12.67□□□□□ -0.38
SDF2L1-201ENST00000248958 A8MWP4 228 aa12.65□□□□□ -0.38
SDF2L1-201ENST00000248958 COX6B2Q6YFQ2 88 aa12.65□□□□□ -0.38
SDF2L1-201ENST00000248958 MT1HP80294 61 aa12.62□□□□□ -0.39
SDF2L1-201ENST00000248958 K7EP34 96 aa12.57□□□□□ -0.4
SDF2L1-201ENST00000248958 IGKV3D-7A0A0C4DH55 119 aa12.56□□□□□ -0.4
SDF2L1-201ENST00000248958 SMCPP49901 116 aaPredicted RBP12.56□□□□□ -0.4
SDF2L1-201ENST00000248958 C8orf17Q9NRJ1 99 aa12.56□□□□□ -0.4
SDF2L1-201ENST00000248958 PCP4L1A6NKN8 68 aa12.54□□□□□ -0.4
SDF2L1-201ENST00000248958 PRR15Q8IV56 129 aa12.53□□□□□ -0.4
SDF2L1-201ENST00000248958 Q8N9P0 234 aaPredicted RBP12.52□□□□□ -0.41
SDF2L1-201ENST00000248958 PRO0461Q9UI25 63 aa12.51□□□□□ -0.41
SDF2L1-201ENST00000248958 GTF2H5Q6ZYL4 71 aa12.5□□□□□ -0.41
SDF2L1-201ENST00000248958 LCE2DQ5TA82 110 aaPredicted RBP12.47□□□□□ -0.41
SDF2L1-201ENST00000248958 ZCCHC13Q8WW36 166 aaKnown RBP12.47□□□□□ -0.41
SDF2L1-201ENST00000248958 Q6ZVQ6 151 aa12.46□□□□□ -0.41
SDF2L1-201ENST00000248958 M0R2T5 61 aa12.45□□□□□ -0.42
SDF2L1-201ENST00000248958 BPY2O14599 106 aa12.45□□□□□ -0.42
SDF2L1-201ENST00000248958 TMEM254Q8TBM7 123 aa12.41□□□□□ -0.42
SDF2L1-201ENST00000248958 MMP24-AS1A0A0U1RRL7 71 aa12.4□□□□□ -0.42
SDF2L1-201ENST00000248958 K7EQZ3 153 aa12.4□□□□□ -0.42
SDF2L1-201ENST00000248958 F8W1H4 67 aa12.39□□□□□ -0.43
SDF2L1-201ENST00000248958 MRPL34Q9BQ48 92 aaKnown RBP12.38□□□□□ -0.43
SDF2L1-201ENST00000248958 RBM12B-AS1Q9P1G2 102 aa12.37□□□□□ -0.43
SDF2L1-201ENST00000248958 hDV103S1A0JD37 113 aa12.36□□□□□ -0.43
SDF2L1-201ENST00000248958 HRES1P13985 223 aa12.35□□□□□ -0.43
SDF2L1-201ENST00000248958 KRTAP10-6P60371 365 aaPredicted RBP12.35□□□□□ -0.43
SDF2L1-201ENST00000248958 UBL5Q9BZL1 73 aa12.35□□□□□ -0.43
SDF2L1-201ENST00000248958 FAM236DA0A1B0GTK5 79 aa12.32□□□□□ -0.44
SDF2L1-201ENST00000248958 FAM236CP0DP71 79 aa12.32□□□□□ -0.44
SDF2L1-201ENST00000248958 LORP23490 312 aaPredicted RBP12.32□□□□□ -0.44
SDF2L1-201ENST00000248958 MPLKIPQ8TAP9 179 aa12.32□□□□□ -0.44
SDF2L1-201ENST00000248958 LINC00846Q9NV44 126 aa12.31□□□□□ -0.44
SDF2L1-201ENST00000248958 FSIP2Q5CZC0 6907 aa12.31□□□□□ -0.44
SDF2L1-201ENST00000248958 SPINK7P58062 85 aa12.3□□□□□ -0.44
SDF2L1-201ENST00000248958 FLGP20930 4061 aaPredicted RBP12.3□□□□□ -0.44
SDF2L1-201ENST00000248958 CRCT1Q9UGL9 99 aa12.29□□□□□ -0.44
SDF2L1-201ENST00000248958 NDUFS5O43920 106 aa12.25□□□□□ -0.45
SDF2L1-201ENST00000248958 ETDBQ3ZM63 59 aa12.25□□□□□ -0.45
SDF2L1-201ENST00000248958 Q8N9L7 120 aa12.22□□□□□ -0.45
SDF2L1-201ENST00000248958 CASC2Q6XLA1 102 aa12.21□□□□□ -0.45
SDF2L1-201ENST00000248958 WFDC13Q8IUB5 93 aa12.2□□□□□ -0.46
SDF2L1-201ENST00000248958 HCG22E2RYF7 251 aa12.11□□□□□ -0.47
SDF2L1-201ENST00000248958 CXCL6P80162 114 aa12.1□□□□□ -0.47
SDF2L1-201ENST00000248958 ACYP1P07311 99 aa12.06□□□□□ -0.48
SDF2L1-201ENST00000248958 Q5W150 140 aa12.04□□□□□ -0.48
SDF2L1-201ENST00000248958 C7orf65Q6ZTY9 151 aa12.02□□□□□ -0.49
SDF2L1-201ENST00000248958 IGKV2D-30A0A075B6S6 120 aa11.99□□□□□ -0.49
SDF2L1-201ENST00000248958 IGKV2-30P06310 120 aa11.99□□□□□ -0.49
SDF2L1-201ENST00000248958 FAM240AA0A1B0GVK7 77 aa11.98□□□□□ -0.49
SDF2L1-201ENST00000248958 KRTAP9-8Q9BYQ0 159 aa11.97□□□□□ -0.49
SDF2L1-201ENST00000248958 TP53AIP1Q9HCN2 124 aa11.93□□□□□ -0.5
SDF2L1-201ENST00000248958 ATP5EP2Q5VTU8 51 aa11.89□□□□□ -0.51
SDF2L1-201ENST00000248958 A0A1B0GV90 55 aa11.87□□□□□ -0.51
SDF2L1-201ENST00000248958 H1FX-AS1Q4G0G2 97 aa11.86□□□□□ -0.51
SDF2L1-201ENST00000248958 MT2AP02795 61 aa11.82□□□□□ -0.52
SDF2L1-201ENST00000248958 HIST1H4AP62805 103 aaKnown RBP11.75□□□□□ -0.53
SDF2L1-201ENST00000248958 C4orf26Q17RF5 130 aa11.75□□□□□ -0.53
SDF2L1-201ENST00000248958 LINC00643Q86TS7 51 aa11.75□□□□□ -0.53
SDF2L1-201ENST00000248958 MT1FP04733 61 aa11.71□□□□□ -0.53
SDF2L1-201ENST00000248958 KRTAP10-10P60014 251 aa11.71□□□□□ -0.53
SDF2L1-201ENST00000248958 TRAV22A0A0B4J277 110 aa11.65□□□□□ -0.54
SDF2L1-201ENST00000248958 J3QR89 54 aa11.65□□□□□ -0.54
SDF2L1-201ENST00000248958 UQCRQO14949 82 aa11.6□□□□□ -0.55
SDF2L1-201ENST00000248958 C1orf64Q8NEQ6 169 aa11.6□□□□□ -0.55
SDF2L1-201ENST00000248958 LOC101927531A0A1B0GV80 90 aa11.59□□□□□ -0.55
SDF2L1-201ENST00000248958 KRTAP9-3Q9BYQ3 159 aa11.59□□□□□ -0.55
SDF2L1-201ENST00000248958 CYP4F30PQ9H0H9 118 aa11.59□□□□□ -0.55
SDF2L1-201ENST00000248958 A0A087WVE0 104 aa11.56□□□□□ -0.56
SDF2L1-201ENST00000248958 KRTAP3-1Q9BYR8 98 aa11.56□□□□□ -0.56
SDF2L1-201ENST00000248958 ATOX1O00244 68 aa11.54□□□□□ -0.56
SDF2L1-201ENST00000248958 H0Y9P7 68 aa11.49□□□□□ -0.57
SDF2L1-201ENST00000248958 S4R3F8 94 aa11.49□□□□□ -0.57
SDF2L1-201ENST00000248958 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.48□□□□□ -0.57
SDF2L1-201ENST00000248958 USH2AO75445 5202 aa11.47□□□□□ -0.57
SDF2L1-201ENST00000248958 LCE2BO14633 110 aa11.46□□□□□ -0.57
SDF2L1-201ENST00000248958 SSPOA2VEC9 5147 aa11.46□□□□□ -0.58
SDF2L1-201ENST00000248958 KRTAP9-7A8MTY7 169 aa11.44□□□□□ -0.58
SDF2L1-201ENST00000248958 C5orf47Q569G3 176 aa11.42□□□□□ -0.58
SDF2L1-201ENST00000248958 CSAG1Q6PB30 78 aa11.4□□□□□ -0.58
SDF2L1-201ENST00000248958 LCA10Q71F78 164 aa11.39□□□□□ -0.59
SDF2L1-201ENST00000248958 OCR1Q9BZK8 76 aa11.37□□□□□ -0.59
SDF2L1-201ENST00000248958 MP68P56378 58 aa11.34□□□□□ -0.59
SDF2L1-201ENST00000248958 LINC00208Q96KT6 92 aa11.32□□□□□ -0.6
SDF2L1-201ENST00000248958 K7ERU9 68 aa11.27□□□□□ -0.61
SDF2L1-201ENST00000248958 SCGB1A1P11684 91 aa11.26□□□□□ -0.61
SDF2L1-201ENST00000248958 H3BPC8 53 aa11.25□□□□□ -0.61
SDF2L1-201ENST00000248958 IMUPQ9GZP8 106 aa11.25□□□□□ -0.61
SDF2L1-201ENST00000248958 FAM236AA0A1B0GUQ0 79 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 160.1 ms