RNA–Protein interactions for RNA: ENST00000221222.15

HOMER3-201, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,384 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-201ENST00000221222 DSCR10P59022 87 aa12.74□□□□□ -0.37
HOMER3-201ENST00000221222 Q6ZVQ6 151 aa12.73□□□□□ -0.37
HOMER3-201ENST00000221222 IGHV6-1A0A0B4J1U7 121 aa12.72□□□□□ -0.37
HOMER3-201ENST00000221222 LINC00313P59037 77 aa12.72□□□□□ -0.37
HOMER3-201ENST00000221222 RPL37P61927 97 aaKnown RBP12.72□□□□□ -0.37
HOMER3-201ENST00000221222 LINC00846Q9NV44 126 aa12.72□□□□□ -0.37
HOMER3-201ENST00000221222 A8MWP4 228 aa12.71□□□□□ -0.37
HOMER3-201ENST00000221222 NDUFB1O75438 58 aa12.71□□□□□ -0.37
HOMER3-201ENST00000221222 FAT4Q6V0I7 4981 aa12.7□□□□□ -0.38
HOMER3-201ENST00000221222 C8orf87E5RJ46 101 aa12.69□□□□□ -0.38
HOMER3-201ENST00000221222 NOTCH2NLQ7Z3S9 236 aa12.69□□□□□ -0.38
HOMER3-201ENST00000221222 Q75L30 129 aa12.68□□□□□ -0.38
HOMER3-201ENST00000221222 UBL5Q9BZL1 73 aa12.68□□□□□ -0.38
HOMER3-201ENST00000221222 IGKV3D-7A0A0C4DH55 119 aa12.67□□□□□ -0.38
HOMER3-201ENST00000221222 KRTAP16-1A8MUX0 517 aa12.67□□□□□ -0.38
HOMER3-201ENST00000221222 C20orf166-AS1Q96NR2 134 aa12.67□□□□□ -0.38
HOMER3-201ENST00000221222 BPY2O14599 106 aa12.66□□□□□ -0.38
HOMER3-201ENST00000221222 A8MUU9 505 aa12.64□□□□□ -0.39
HOMER3-201ENST00000221222 PCOTHQ58A44 107 aa12.63□□□□□ -0.39
HOMER3-201ENST00000221222 PRR15Q8IV56 129 aa12.63□□□□□ -0.39
HOMER3-201ENST00000221222 LCE2AQ5TA79 106 aaPredicted RBP12.6□□□□□ -0.39
HOMER3-201ENST00000221222 C8orf17Q9NRJ1 99 aa12.59□□□□□ -0.39
HOMER3-201ENST00000221222 FAM240AA0A1B0GVK7 77 aa12.58□□□□□ -0.4
HOMER3-201ENST00000221222 ACYP1P07311 99 aa12.58□□□□□ -0.4
HOMER3-201ENST00000221222 K7EQZ3 153 aa12.57□□□□□ -0.4
HOMER3-201ENST00000221222 KRTAP9-2Q9BYQ4 174 aa12.56□□□□□ -0.4
HOMER3-201ENST00000221222 ATP11AUNQ6ZP68 121 aa12.55□□□□□ -0.4
HOMER3-201ENST00000221222 KRTAP4-1Q9BYQ7 146 aa12.55□□□□□ -0.4
HOMER3-201ENST00000221222 MMP24-AS1A0A0U1RRL7 71 aa12.51□□□□□ -0.41
HOMER3-201ENST00000221222 Q8N9L7 120 aa12.48□□□□□ -0.41
HOMER3-201ENST00000221222 Q8N9P0 234 aaPredicted RBP12.47□□□□□ -0.41
HOMER3-201ENST00000221222 CXCL6P80162 114 aa12.46□□□□□ -0.41
HOMER3-201ENST00000221222 TMEM254Q8TBM7 123 aa12.44□□□□□ -0.42
HOMER3-201ENST00000221222 hDV103S1A0JD37 113 aa12.43□□□□□ -0.42
HOMER3-201ENST00000221222 MRPL34Q9BQ48 92 aaKnown RBP12.41□□□□□ -0.42
HOMER3-201ENST00000221222 J3QR89 54 aa12.38□□□□□ -0.43
HOMER3-201ENST00000221222 ATP5EP2Q5VTU8 51 aa12.36□□□□□ -0.43
HOMER3-201ENST00000221222 CASC2Q6XLA1 102 aa12.35□□□□□ -0.43
HOMER3-201ENST00000221222 WFDC13Q8IUB5 93 aa12.34□□□□□ -0.43
HOMER3-201ENST00000221222 ZCCHC13Q8WW36 166 aaKnown RBP12.33□□□□□ -0.44
HOMER3-201ENST00000221222 HCG22E2RYF7 251 aa12.31□□□□□ -0.44
HOMER3-201ENST00000221222 LINC00643Q86TS7 51 aa12.31□□□□□ -0.44
HOMER3-201ENST00000221222 NDUFS5O43920 106 aa12.26□□□□□ -0.45
HOMER3-201ENST00000221222 KRTAP9-6A0A140TA67 174 aa12.21□□□□□ -0.45
HOMER3-201ENST00000221222 KRTAP19-2Q3LHN2 52 aa12.2□□□□□ -0.46
HOMER3-201ENST00000221222 K7ERU9 68 aa12.18□□□□□ -0.46
HOMER3-201ENST00000221222 HIST1H4AP62805 103 aaKnown RBP12.17□□□□□ -0.46
HOMER3-201ENST00000221222 LCE2CQ5TA81 110 aa12.13□□□□□ -0.47
HOMER3-201ENST00000221222 Q5W150 140 aa12.11□□□□□ -0.47
HOMER3-201ENST00000221222 SPINK7P58062 85 aa12.1□□□□□ -0.47
HOMER3-201ENST00000221222 HRES1P13985 223 aa12.07□□□□□ -0.48
HOMER3-201ENST00000221222 TP53AIP1Q9HCN2 124 aa12.07□□□□□ -0.48
HOMER3-201ENST00000221222 A0A087WVE0 104 aa12.06□□□□□ -0.48
HOMER3-201ENST00000221222 COX6B2Q6YFQ2 88 aa12.03□□□□□ -0.48
HOMER3-201ENST00000221222 MPLKIPQ8TAP9 179 aa12.03□□□□□ -0.48
HOMER3-201ENST00000221222 LCE2DQ5TA82 110 aaPredicted RBP11.98□□□□□ -0.49
HOMER3-201ENST00000221222 RBM12B-AS1Q9P1G2 102 aa11.96□□□□□ -0.49
HOMER3-201ENST00000221222 C7orf65Q6ZTY9 151 aa11.95□□□□□ -0.5
HOMER3-201ENST00000221222 IGKV2D-30A0A075B6S6 120 aa11.93□□□□□ -0.5
HOMER3-201ENST00000221222 IGKV2-30P06310 120 aa11.93□□□□□ -0.5
HOMER3-201ENST00000221222 MT1HP80294 61 aa11.93□□□□□ -0.5
HOMER3-201ENST00000221222 IMUPQ9GZP8 106 aa11.92□□□□□ -0.5
HOMER3-201ENST00000221222 MT-ATP8P03928 68 aa11.9□□□□□ -0.5
HOMER3-201ENST00000221222 TRAV22A0A0B4J277 110 aa11.87□□□□□ -0.51
HOMER3-201ENST00000221222 FAM236DA0A1B0GTK5 79 aa11.87□□□□□ -0.51
HOMER3-201ENST00000221222 UQCRQO14949 82 aa11.87□□□□□ -0.51
HOMER3-201ENST00000221222 FAM236CP0DP71 79 aa11.87□□□□□ -0.51
HOMER3-201ENST00000221222 FLGP20930 4061 aaPredicted RBP11.85□□□□□ -0.51
HOMER3-201ENST00000221222 CRCT1Q9UGL9 99 aa11.82□□□□□ -0.52
HOMER3-201ENST00000221222 FSIP2Q5CZC0 6907 aa11.81□□□□□ -0.52
HOMER3-201ENST00000221222 OCR1Q9BZK8 76 aa11.81□□□□□ -0.52
HOMER3-201ENST00000221222 H0Y9P7 68 aa11.75□□□□□ -0.53
HOMER3-201ENST00000221222 ATOX1O00244 68 aa11.75□□□□□ -0.53
HOMER3-201ENST00000221222 LOC101927531A0A1B0GV80 90 aa11.74□□□□□ -0.53
HOMER3-201ENST00000221222 M0R2T5 61 aa11.74□□□□□ -0.53
HOMER3-201ENST00000221222 KRTAP10-6P60371 365 aaPredicted RBP11.74□□□□□ -0.53
HOMER3-201ENST00000221222 SCGB1A1P11684 91 aa11.73□□□□□ -0.53
HOMER3-201ENST00000221222 CYP4F30PQ9H0H9 118 aa11.73□□□□□ -0.53
HOMER3-201ENST00000221222 LORP23490 312 aaPredicted RBP11.72□□□□□ -0.53
HOMER3-201ENST00000221222 C4orf26Q17RF5 130 aa11.68□□□□□ -0.54
HOMER3-201ENST00000221222 FAM236AA0A1B0GUQ0 79 aa11.67□□□□□ -0.54
HOMER3-201ENST00000221222 FAM236BA0A1B0GV22 79 aa11.67□□□□□ -0.54
HOMER3-201ENST00000221222 C5orf47Q569G3 176 aa11.66□□□□□ -0.54
HOMER3-201ENST00000221222 MP68P56378 58 aa11.64□□□□□ -0.55
HOMER3-201ENST00000221222 C1orf64Q8NEQ6 169 aa11.64□□□□□ -0.55
HOMER3-201ENST00000221222 H1FX-AS1Q4G0G2 97 aa11.62□□□□□ -0.55
HOMER3-201ENST00000221222 LINC00208Q96KT6 92 aa11.61□□□□□ -0.55
HOMER3-201ENST00000221222 SMIM20Q8N5G0 67 aa11.59□□□□□ -0.55
HOMER3-201ENST00000221222 H3BPC8 53 aa11.57□□□□□ -0.56
HOMER3-201ENST00000221222 KRTAP3-1Q9BYR8 98 aa11.54□□□□□ -0.56
HOMER3-201ENST00000221222 TRAV7A0A075B6U4 112 aa11.54□□□□□ -0.56
HOMER3-201ENST00000221222 KLKP1Q107X0 134 aa11.47□□□□□ -0.57
HOMER3-201ENST00000221222 KRTAP9-8Q9BYQ0 159 aa11.38□□□□□ -0.59
HOMER3-201ENST00000221222 SERP2Q8N6R1 65 aa11.36□□□□□ -0.59
HOMER3-201ENST00000221222 S4R3F8 94 aa11.34□□□□□ -0.59
HOMER3-201ENST00000221222 A8MUN3 132 aa11.31□□□□□ -0.6
HOMER3-201ENST00000221222 LCA10Q71F78 164 aa11.28□□□□□ -0.6
HOMER3-201ENST00000221222 MT2AP02795 61 aa11.27□□□□□ -0.61
HOMER3-201ENST00000221222 SNURFQ9Y675 71 aa11.22□□□□□ -0.61
HOMER3-201ENST00000221222 C20orf197Q8N268 126 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms