RNA–Protein interactions for RNA: ENST00000216456.6

VTI1B-201, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 1 (best)

Gene VTI1B, Length 1,103 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-201ENST00000216456 A0A1B0GVX0 72 aa10.98□□□□□ -0.65
VTI1B-201ENST00000216456 RBM3P98179 157 aaKnown RBP10.97□□□□□ -0.65
VTI1B-201ENST00000216456 RBM12B-AS1Q9P1G2 102 aa10.95□□□□□ -0.66
VTI1B-201ENST00000216456 DSCR8Q96T75 97 aa10.93□□□□□ -0.66
VTI1B-201ENST00000216456 BAALC-AS2P0C853 105 aa10.92□□□□□ -0.66
VTI1B-201ENST00000216456 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.91□□□□□ -0.66
VTI1B-201ENST00000216456 C8orf87E5RJ46 101 aa10.91□□□□□ -0.66
VTI1B-201ENST00000216456 LCE2BO14633 110 aa10.91□□□□□ -0.66
VTI1B-201ENST00000216456 NAA38Q9BRA0 125 aaKnown RBP10.9□□□□□ -0.66
VTI1B-201ENST00000216456 ZCCHC13Q8WW36 166 aaKnown RBP10.88□□□□□ -0.67
VTI1B-201ENST00000216456 C9JAW5 83 aa10.87□□□□□ -0.67
VTI1B-201ENST00000216456 KRTAP9-3Q9BYQ3 159 aa10.87□□□□□ -0.67
VTI1B-201ENST00000216456 KRTAP10-10P60014 251 aa10.86□□□□□ -0.67
VTI1B-201ENST00000216456 Q6ZQT0 140 aa10.86□□□□□ -0.67
VTI1B-201ENST00000216456 SPINK7P58062 85 aa10.84□□□□□ -0.67
VTI1B-201ENST00000216456 FCGBPQ9Y6R7 5405 aaPredicted RBP10.83□□□□□ -0.68
VTI1B-201ENST00000216456 KRTAP9-7A8MTY7 169 aa10.81□□□□□ -0.68
VTI1B-201ENST00000216456 J3KT08 172 aa10.8□□□□□ -0.68
VTI1B-201ENST00000216456 KRTAP19-1Q8IUB9 90 aa10.79□□□□□ -0.68
VTI1B-201ENST00000216456 Q8N9P0 234 aaPredicted RBP10.78□□□□□ -0.68
VTI1B-201ENST00000216456 C8orf17Q9NRJ1 99 aa10.77□□□□□ -0.69
VTI1B-201ENST00000216456 IGKV3D-7A0A0C4DH55 119 aa10.76□□□□□ -0.69
VTI1B-201ENST00000216456 NDUFB1O75438 58 aa10.74□□□□□ -0.69
VTI1B-201ENST00000216456 ATXN8Q156A1 80 aa10.74□□□□□ -0.69
VTI1B-201ENST00000216456 A8MWP4 228 aa10.73□□□□□ -0.69
VTI1B-201ENST00000216456 C14orf132Q9NPU4 83 aa10.73□□□□□ -0.69
VTI1B-201ENST00000216456 LOC110117498A0A087WWA1 95 aa10.72□□□□□ -0.69
VTI1B-201ENST00000216456 WFDC13Q8IUB5 93 aa10.71□□□□□ -0.69
VTI1B-201ENST00000216456 MTURNQ8N3F0 131 aa10.71□□□□□ -0.69
VTI1B-201ENST00000216456 C21orf62-AS1Q17RA5 79 aa10.7□□□□□ -0.7
VTI1B-201ENST00000216456 LYRM7Q5U5X0 104 aa10.7□□□□□ -0.7
VTI1B-201ENST00000216456 JMJD7-PLA2G4BH0Y9G9 81 aa10.69□□□□□ -0.7
VTI1B-201ENST00000216456 M0R143 59 aa10.67□□□□□ -0.7
VTI1B-201ENST00000216456 Q6ZVQ6 151 aa10.67□□□□□ -0.7
VTI1B-201ENST00000216456 PRR15Q8IV56 129 aa10.63□□□□□ -0.71
VTI1B-201ENST00000216456 MMP24-AS1A0A0U1RRL7 71 aa10.61□□□□□ -0.71
VTI1B-201ENST00000216456 A0A1B0GW54 56 aa10.59□□□□□ -0.71
VTI1B-201ENST00000216456 NREPQ16612 68 aa10.59□□□□□ -0.71
VTI1B-201ENST00000216456 PDE6GP18545 87 aa10.58□□□□□ -0.72
VTI1B-201ENST00000216456 K7EQZ3 153 aa10.55□□□□□ -0.72
VTI1B-201ENST00000216456 BATFQ16520 125 aa10.55□□□□□ -0.72
VTI1B-201ENST00000216456 MRPL34Q9BQ48 92 aaKnown RBP10.55□□□□□ -0.72
VTI1B-201ENST00000216456 TMEM254Q8TBM7 123 aa10.54□□□□□ -0.72
VTI1B-201ENST00000216456 NDUFS5O43920 106 aa10.49□□□□□ -0.73
VTI1B-201ENST00000216456 hDV103S1A0JD37 113 aa10.48□□□□□ -0.73
VTI1B-201ENST00000216456 MACF1Q9UPN3 7388 aaKnown RBP10.47□□□□□ -0.73
VTI1B-201ENST00000216456 SMIM6P0DI80 62 aa10.47□□□□□ -0.73
VTI1B-201ENST00000216456 KRTAP19-6Q3LI70 58 aa10.47□□□□□ -0.73
VTI1B-201ENST00000216456 Q5W150 140 aa10.46□□□□□ -0.73
VTI1B-201ENST00000216456 SYNE2Q8WXH0 6885 aaKnown RBP10.44□□□□□ -0.74
VTI1B-201ENST00000216456 H1FX-AS1Q4G0G2 97 aa10.44□□□□□ -0.74
VTI1B-201ENST00000216456 IGKV2D-30A0A075B6S6 120 aa10.43□□□□□ -0.74
VTI1B-201ENST00000216456 IGKV2-30P06310 120 aa10.43□□□□□ -0.74
VTI1B-201ENST00000216456 Q8N9L7 120 aa10.42□□□□□ -0.74
VTI1B-201ENST00000216456 C9orf118A6NHY6 69 aa10.4□□□□□ -0.74
VTI1B-201ENST00000216456 TAX1BP3O14907 124 aa10.4□□□□□ -0.74
VTI1B-201ENST00000216456 H3BT86 120 aa10.39□□□□□ -0.75
VTI1B-201ENST00000216456 BPY2O14599 106 aa10.38□□□□□ -0.75
VTI1B-201ENST00000216456 A0A1W2PPM0 123 aa10.37□□□□□ -0.75
VTI1B-201ENST00000216456 TSTD3H0UI37 97 aa10.37□□□□□ -0.75
VTI1B-201ENST00000216456 C7orf65Q6ZTY9 151 aa10.32□□□□□ -0.76
VTI1B-201ENST00000216456 HCG22E2RYF7 251 aa10.3□□□□□ -0.76
VTI1B-201ENST00000216456 C4orf26Q17RF5 130 aa10.29□□□□□ -0.76
VTI1B-201ENST00000216456 CASC2Q6XLA1 102 aa10.29□□□□□ -0.76
VTI1B-201ENST00000216456 LINC00846Q9NV44 126 aa10.29□□□□□ -0.76
VTI1B-201ENST00000216456 SMCPP49901 116 aaPredicted RBP10.27□□□□□ -0.77
VTI1B-201ENST00000216456 LOC105371267A0A1B0GV96 52 aa10.22□□□□□ -0.77
VTI1B-201ENST00000216456 SPCS1Q9Y6A9 102 aa10.21□□□□□ -0.77
VTI1B-201ENST00000216456 C5orf47Q569G3 176 aa10.17□□□□□ -0.78
VTI1B-201ENST00000216456 KRTAP3-1Q9BYR8 98 aa10.17□□□□□ -0.78
VTI1B-201ENST00000216456 CXCL6P80162 114 aa10.14□□□□□ -0.79
VTI1B-201ENST00000216456 PRO0461Q9UI25 63 aa10.12□□□□□ -0.79
VTI1B-201ENST00000216456 KRTAP6-3Q3LI67 103 aa10.06□□□□□ -0.8
VTI1B-201ENST00000216456 UBL5Q9BZL1 73 aa10.05□□□□□ -0.8
VTI1B-201ENST00000216456 FAM236AA0A1B0GUQ0 79 aa10.04□□□□□ -0.8
VTI1B-201ENST00000216456 FAM236BA0A1B0GV22 79 aa10.04□□□□□ -0.8
VTI1B-201ENST00000216456 S4R3F8 94 aa10.04□□□□□ -0.8
VTI1B-201ENST00000216456 MT1BP07438 61 aa10.02□□□□□ -0.81
VTI1B-201ENST00000216456 LCA10Q71F78 164 aa10.02□□□□□ -0.81
VTI1B-201ENST00000216456 C1orf64Q8NEQ6 169 aa10.02□□□□□ -0.81
VTI1B-201ENST00000216456 K7EP34 96 aa9.99□□□□□ -0.81
VTI1B-201ENST00000216456 COL5A1-AS1Q5SY13 56 aa9.96□□□□□ -0.82
VTI1B-201ENST00000216456 CSAG1Q6PB30 78 aa9.94□□□□□ -0.82
VTI1B-201ENST00000216456 A6NN06 94 aa9.91□□□□□ -0.82
VTI1B-201ENST00000216456 KRTAP19-8Q3LI54 63 aa9.9□□□□□ -0.82
VTI1B-201ENST00000216456 SPRR2GQ9BYE4 73 aa9.9□□□□□ -0.82
VTI1B-201ENST00000216456 Q5VV11 94 aa9.89□□□□□ -0.83
VTI1B-201ENST00000216456 KRTAP3-3Q9BYR6 98 aa9.89□□□□□ -0.83
VTI1B-201ENST00000216456 A0A087WVE0 104 aa9.88□□□□□ -0.83
VTI1B-201ENST00000216456 TP53AIP1Q9HCN2 124 aa9.85□□□□□ -0.83
VTI1B-201ENST00000216456 ETDBQ3ZM63 59 aa9.82□□□□□ -0.84
VTI1B-201ENST00000216456 NEBP20929 6669 aa9.8□□□□□ -0.84
VTI1B-201ENST00000216456 KLKP1Q107X0 134 aa9.8□□□□□ -0.84
VTI1B-201ENST00000216456 CYP4F30PQ9H0H9 118 aa9.8□□□□□ -0.84
VTI1B-201ENST00000216456 KRTAP10-5P60370 271 aa9.77□□□□□ -0.85
VTI1B-201ENST00000216456 MUC12Q9UKN1 5478 aa9.76□□□□□ -0.85
VTI1B-201ENST00000216456 GTF2H5Q6ZYL4 71 aa9.75□□□□□ -0.85
VTI1B-201ENST00000216456 F8W1H4 67 aa9.72□□□□□ -0.85
VTI1B-201ENST00000216456 TRAV22A0A0B4J277 110 aa9.68□□□□□ -0.86
VTI1B-201ENST00000216456 PCP4L1A6NKN8 68 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms