RNA–Protein interactions for RNA: ENSMUST00000049184.8

Ushbp1-201, Transcript of Usher syndrome type-1C protein-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ushbp1, Length 2,438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1-201ENSMUST00000049184 Ncoa6Q9JL19 2067 aa11.61□□□□□ -0.55
Ushbp1-201ENSMUST00000049184 Frem1Q684R7 2191 aa11.61□□□□□ -0.55
Ushbp1-201ENSMUST00000049184 Omt2bD3YX29 119 aa11.61□□□□□ -0.55
Ushbp1-201ENSMUST00000049184 Vsig4F6TUL9 280 aa11.61□□□□□ -0.55
Ushbp1-201ENSMUST00000049184 PlnP61014 52 aa11.61□□□□□ -0.55
Ushbp1-201ENSMUST00000049184 Cysrt1Q9D1E4 142 aa11.61□□□□□ -0.55
Ushbp1-201ENSMUST00000049184 Myod1P10085 318 aa11.6□□□□□ -0.55
Ushbp1-201ENSMUST00000049184 Ripply2Q2WG76 128 aa11.6□□□□□ -0.55
Ushbp1-201ENSMUST00000049184 Shisa9Q9CZN4 424 aa11.6□□□□□ -0.55
Ushbp1-201ENSMUST00000049184 Trav14-2A0A075B694 121 aa11.6□□□□□ -0.55
Ushbp1-201ENSMUST00000049184 Gm29289A0A087WPY7 166 aa11.6□□□□□ -0.55
Ushbp1-201ENSMUST00000049184 Gm4064A0A087WR82 380 aa11.6□□□□□ -0.55
Ushbp1-201ENSMUST00000049184 KprpB2RUR4 657 aa11.6□□□□□ -0.55
Ushbp1-201ENSMUST00000049184 Gm10352B2RWR6 380 aa11.6□□□□□ -0.55
Ushbp1-201ENSMUST00000049184 Gm21693J3QK27 380 aa11.6□□□□□ -0.55
Ushbp1-201ENSMUST00000049184 Rbmy1a1O35698 380 aa11.6□□□□□ -0.55
Ushbp1-201ENSMUST00000049184 Tmem136Q3TYE7 245 aa11.6□□□□□ -0.55
Ushbp1-201ENSMUST00000049184 Rasl11aQ6IMB1 242 aa11.6□□□□□ -0.55
Ushbp1-201ENSMUST00000049184 Atxn7l1Q9CZ05 146 aa11.6□□□□□ -0.55
Ushbp1-201ENSMUST00000049184 Obox1Q9D350 204 aa11.6□□□□□ -0.55
Ushbp1-201ENSMUST00000049184 Esp4A8R0T8 117 aa11.59□□□□□ -0.55
Ushbp1-201ENSMUST00000049184 P01756 117 aa11.59□□□□□ -0.55
Ushbp1-201ENSMUST00000049184 P01757 117 aa11.59□□□□□ -0.55
Ushbp1-201ENSMUST00000049184 Il22ra1Q80XZ4 581 aa11.59□□□□□ -0.55
Ushbp1-201ENSMUST00000049184 Lypd1Q8BLC3 141 aa11.59□□□□□ -0.55
Ushbp1-201ENSMUST00000049184 Cnih1O35372 144 aa11.59□□□□□ -0.55
Ushbp1-201ENSMUST00000049184 Gsx1P31315 261 aa11.59□□□□□ -0.55
Ushbp1-201ENSMUST00000049184 Ccsmst1Q6RUT7 136 aa11.59□□□□□ -0.55
Ushbp1-201ENSMUST00000049184 Rnf185Q91YT2 192 aa11.59□□□□□ -0.55
Ushbp1-201ENSMUST00000049184 Fmc1Q9CR13 113 aa11.59□□□□□ -0.55
Ushbp1-201ENSMUST00000049184 Tnfrsf23Q9ER63 176 aa11.59□□□□□ -0.55
Ushbp1-201ENSMUST00000049184 Apc2Q9Z1K7 2274 aa11.58□□□□□ -0.56
Ushbp1-201ENSMUST00000049184 Sertad4A7DTG3 377 aa11.58□□□□□ -0.56
Ushbp1-201ENSMUST00000049184 Gng4P50153 75 aa11.58□□□□□ -0.56
Ushbp1-201ENSMUST00000049184 Pde6hP61249 83 aa11.58□□□□□ -0.56
Ushbp1-201ENSMUST00000049184 Spata45Q9CVW4 97 aa11.58□□□□□ -0.56
Ushbp1-201ENSMUST00000049184 Gm33815A0A087WNV3 176 aa11.58□□□□□ -0.56
Ushbp1-201ENSMUST00000049184 Gm29644A0A087WPG2 191 aa11.58□□□□□ -0.56
Ushbp1-201ENSMUST00000049184 Defa37K9J724 93 aa11.58□□□□□ -0.56
Ushbp1-201ENSMUST00000049184 P18526 117 aa11.58□□□□□ -0.56
Ushbp1-201ENSMUST00000049184 Defa5P28312 93 aa11.58□□□□□ -0.56
Ushbp1-201ENSMUST00000049184 Ssbp4Q3U4B1 363 aa11.58□□□□□ -0.56
Ushbp1-201ENSMUST00000049184 Olfr1243Q8VGM7 305 aa11.58□□□□□ -0.56
Ushbp1-201ENSMUST00000049184 Pear1Q8VIK5 1034 aa11.58□□□□□ -0.56
Ushbp1-201ENSMUST00000049184 Tmem89Q9DA04 169 aa11.58□□□□□ -0.56
Ushbp1-201ENSMUST00000049184 OtorQ9JIE3 128 aa11.58□□□□□ -0.56
Ushbp1-201ENSMUST00000049184 Hint1P70349 126 aaKnown RBP11.57□□□□□ -0.56
Ushbp1-201ENSMUST00000049184 Rnf182Q8C432 247 aa11.57□□□□□ -0.56
Ushbp1-201ENSMUST00000049184 NpbQ8K4P1 119 aa11.57□□□□□ -0.56
Ushbp1-201ENSMUST00000049184 Dusp14Q9JLY7 198 aa11.57□□□□□ -0.56
Ushbp1-201ENSMUST00000049184 Znf239P24399 201 aa11.57□□□□□ -0.56
Ushbp1-201ENSMUST00000049184 Cd24P24807 76 aa11.57□□□□□ -0.56
Ushbp1-201ENSMUST00000049184 Znf575Q3TXZ1 239 aa11.57□□□□□ -0.56
Ushbp1-201ENSMUST00000049184 Olfr981Q8VEU2 310 aa11.57□□□□□ -0.56
Ushbp1-201ENSMUST00000049184 CklfQ9DAS1 152 aa11.57□□□□□ -0.56
Ushbp1-201ENSMUST00000049184 Tcf24V9GWT9 166 aa11.57□□□□□ -0.56
Ushbp1-201ENSMUST00000049184 Zfp493E9Q1L8 384 aa11.56□□□□□ -0.56
Ushbp1-201ENSMUST00000049184 Tal2Q62282 108 aa11.56□□□□□ -0.56
Ushbp1-201ENSMUST00000049184 Fam216bQ8CC14 138 aa11.56□□□□□ -0.56
Ushbp1-201ENSMUST00000049184 Tmem116A0A0G2JGD3 401 aa11.56□□□□□ -0.56
Ushbp1-201ENSMUST00000049184 Defa24Q5G865 93 aa11.56□□□□□ -0.56
Ushbp1-201ENSMUST00000049184 Trav3-1Q5R1I8 114 aa11.56□□□□□ -0.56
Ushbp1-201ENSMUST00000049184 Gm26566Q8CAC1 153 aa11.56□□□□□ -0.56
Ushbp1-201ENSMUST00000049184 Arfgef3Q3UGY8 2170 aa11.55□□□□□ -0.56
Ushbp1-201ENSMUST00000049184 Ighv5-6A0A075B5Q0 117 aa11.55□□□□□ -0.56
Ushbp1-201ENSMUST00000049184 Srsf1Q6PDM2 248 aaKnown RBP11.55□□□□□ -0.56
Ushbp1-201ENSMUST00000049184 Atp6v0bQ91V37 205 aa11.55□□□□□ -0.56
Ushbp1-201ENSMUST00000049184 Trav7-5A0A0G2JFX6 112 aa11.55□□□□□ -0.56
Ushbp1-201ENSMUST00000049184 Hbb-bsA8DUK4 147 aa11.55□□□□□ -0.56
Ushbp1-201ENSMUST00000049184 Insl3O09107 122 aa11.55□□□□□ -0.56
Ushbp1-201ENSMUST00000049184 Gosr1O88630 250 aa11.55□□□□□ -0.56
Ushbp1-201ENSMUST00000049184 P01741 114 aa11.55□□□□□ -0.56
Ushbp1-201ENSMUST00000049184 P01783 136 aa11.55□□□□□ -0.56
Ushbp1-201ENSMUST00000049184 Hbb-b1P02088 147 aa11.55□□□□□ -0.56
Ushbp1-201ENSMUST00000049184 7420426K07RikQ3UX66 186 aa11.55□□□□□ -0.56
Ushbp1-201ENSMUST00000049184 CnfnQ6PCW6 111 aa11.55□□□□□ -0.56
Ushbp1-201ENSMUST00000049184 9230109A22RikQ8BHE6 111 aa11.55□□□□□ -0.56
Ushbp1-201ENSMUST00000049184 Shank1D3YZU1 2167 aa11.54□□□□□ -0.56
Ushbp1-201ENSMUST00000049184 Ighv1-69A0A0G2JFS5 117 aa11.54□□□□□ -0.56
Ushbp1-201ENSMUST00000049184 Tcl1b4P56844 120 aa11.54□□□□□ -0.56
Ushbp1-201ENSMUST00000049184 Rbfox3Q8BIF2 374 aa11.54□□□□□ -0.56
Ushbp1-201ENSMUST00000049184 Gtsf1lQ9CWD0 151 aa11.54□□□□□ -0.56
Ushbp1-201ENSMUST00000049184 CadB2RQC6 2225 aa11.54□□□□□ -0.56
Ushbp1-201ENSMUST00000049184 P01801 115 aa11.54□□□□□ -0.56
Ushbp1-201ENSMUST00000049184 Trav2Q5R1I9 109 aa11.54□□□□□ -0.56
Ushbp1-201ENSMUST00000049184 BC048562Q80ZQ7 204 aa11.54□□□□□ -0.56
Ushbp1-201ENSMUST00000049184 Asxl3Q8C4A5 2259 aa11.53□□□□□ -0.56
Ushbp1-201ENSMUST00000049184 PoleQ9WVF7 2283 aa11.53□□□□□ -0.56
Ushbp1-201ENSMUST00000049184 Trav8-1A0A075B641 109 aa11.53□□□□□ -0.56
Ushbp1-201ENSMUST00000049184 Gfra1P97785 468 aa11.53□□□□□ -0.56
Ushbp1-201ENSMUST00000049184 Vwc2lQ505H4 222 aa11.53□□□□□ -0.56
Ushbp1-201ENSMUST00000049184 Higd1cQ76I25 96 aa11.53□□□□□ -0.56
Ushbp1-201ENSMUST00000049184 Gm14137Q8CE97 175 aa11.53□□□□□ -0.56
Ushbp1-201ENSMUST00000049184 Klk15Q8CGR4 254 aa11.53□□□□□ -0.56
Ushbp1-201ENSMUST00000049184 3100002H09RikQ9CXW6 140 aa11.53□□□□□ -0.56
Ushbp1-201ENSMUST00000049184 Cep295Q8BQ48 2412 aa11.53□□□□□ -0.56
Ushbp1-201ENSMUST00000049184 Iglc1A0A0G2JE99 106 aa11.52□□□□□ -0.56
Ushbp1-201ENSMUST00000049184 Ovol3D3YYM0 189 aa11.52□□□□□ -0.56
Ushbp1-201ENSMUST00000049184 Cxcl13O55038 109 aa11.52□□□□□ -0.56
Ushbp1-201ENSMUST00000049184 P01794 123 aa11.52□□□□□ -0.56
Retrieved 100 of 22,080 RNA–protein pairs in 54.8 ms