RNA–Protein interactions for RNA: ENSMUST00000039443.13

Ccdc50-201, Transcript of Coiled-coil domain-containing protein 50, mousemouse

TSL 1 (best) BASIC

Gene Ccdc50, Length 2,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc50-201ENSMUST00000039443 Lypd8Q9D7S0 255 aa14.91□□□□□ -0.02
Ccdc50-201ENSMUST00000039443 Tmem160Q9D938 188 aa14.91□□□□□ -0.02
Ccdc50-201ENSMUST00000039443 Tln1P26039 2541 aaKnown RBP14.9□□□□□ -0.02
Ccdc50-201ENSMUST00000039443 Ighv1-81A0A075B5Y4 117 aa14.9□□□□□ -0.02
Ccdc50-201ENSMUST00000039443 BC030500E9Q6W0 185 aa14.9□□□□□ -0.02
Ccdc50-201ENSMUST00000039443 Ebi3O35228 228 aa14.9□□□□□ -0.02
Ccdc50-201ENSMUST00000039443 Gm5150Q1AN92 299 aa14.9□□□□□ -0.02
Ccdc50-201ENSMUST00000039443 Dppa2Q9CWH0 301 aa14.9□□□□□ -0.02
Ccdc50-201ENSMUST00000039443 Pcnx1Q9QYC1 2344 aa14.9□□□□□ -0.02
Ccdc50-201ENSMUST00000039443 Ighv7-4A0A0A6YXL5 121 aa14.9□□□□□ -0.02
Ccdc50-201ENSMUST00000039443 Esp38A8R0X1 80 aa14.9□□□□□ -0.02
Ccdc50-201ENSMUST00000039443 Olfr235E9Q9Z6 312 aa14.9□□□□□ -0.02
Ccdc50-201ENSMUST00000039443 Ca1P13634 261 aa14.9□□□□□ -0.02
Ccdc50-201ENSMUST00000039443 Tdgf1P51865 171 aa14.9□□□□□ -0.02
Ccdc50-201ENSMUST00000039443 G0s2Q61585 103 aa14.9□□□□□ -0.02
Ccdc50-201ENSMUST00000039443 Ncoa6Q9JL19 2067 aa14.89□□□□□ -0.03
Ccdc50-201ENSMUST00000039443 Emp2O88662 172 aa14.89□□□□□ -0.03
Ccdc50-201ENSMUST00000039443 Pla2g2cP48076 150 aa14.89□□□□□ -0.03
Ccdc50-201ENSMUST00000039443 Slc35d2Q762D5 326 aa14.89□□□□□ -0.03
Ccdc50-201ENSMUST00000039443 Plrg1Q922V4 513 aaKnown RBP14.89□□□□□ -0.03
Ccdc50-201ENSMUST00000039443 PpdpfQ9CR37 115 aa14.89□□□□□ -0.03
Ccdc50-201ENSMUST00000039443 Rchy1Q9CR50 261 aa14.89□□□□□ -0.03
Ccdc50-201ENSMUST00000039443 Pkd1l2Q7TN88 2461 aa14.89□□□□□ -0.03
Ccdc50-201ENSMUST00000039443 Igsf23B2RTN2 239 aa14.88□□□□□ -0.03
Ccdc50-201ENSMUST00000039443 Znf239P24399 201 aa14.88□□□□□ -0.03
Ccdc50-201ENSMUST00000039443 Fosl1P48755 273 aa14.88□□□□□ -0.03
Ccdc50-201ENSMUST00000039443 Spata46Q4FZF2 204 aa14.88□□□□□ -0.03
Ccdc50-201ENSMUST00000039443 MycbQ6P8Z1 170 aa14.88□□□□□ -0.03
Ccdc50-201ENSMUST00000039443 Rasl10aQ8K5A4 203 aa14.88□□□□□ -0.03
Ccdc50-201ENSMUST00000039443 Map1lc3aQ91VR7 121 aa14.88□□□□□ -0.03
Ccdc50-201ENSMUST00000039443 Shisa9Q9CZN4 424 aa14.88□□□□□ -0.03
Ccdc50-201ENSMUST00000039443 Gm10073E9Q3T0 114 aa14.88□□□□□ -0.03
Ccdc50-201ENSMUST00000039443 PlnP61014 52 aa14.88□□□□□ -0.03
Ccdc50-201ENSMUST00000039443 Gtf2h5Q8K2X8 71 aa14.88□□□□□ -0.03
Ccdc50-201ENSMUST00000039443 Olfr981Q8VEU2 310 aa14.88□□□□□ -0.03
Ccdc50-201ENSMUST00000039443 Olfr498Q8VEW2 330 aa14.88□□□□□ -0.03
Ccdc50-201ENSMUST00000039443 Tppp3Q9CRB6 176 aaKnown RBP14.88□□□□□ -0.03
Ccdc50-201ENSMUST00000039443 Dopey2Q3UHQ6 2295 aa14.88□□□□□ -0.03
Ccdc50-201ENSMUST00000039443 Ighv9-1A0A0B4J1P3 117 aa14.87□□□□□ -0.03
Ccdc50-201ENSMUST00000039443 Ssbp4Q3U4B1 363 aa14.87□□□□□ -0.03
Ccdc50-201ENSMUST00000039443 TdhQ8K3F7 373 aa14.87□□□□□ -0.03
Ccdc50-201ENSMUST00000039443 UrahQ9CRB3 118 aa14.87□□□□□ -0.03
Ccdc50-201ENSMUST00000039443 Gtsf1lQ9CWD0 151 aa14.87□□□□□ -0.03
Ccdc50-201ENSMUST00000039443 Ankrd11E9Q4F7 2643 aa14.87□□□□□ -0.03
Ccdc50-201ENSMUST00000039443 Ca2P00920 260 aaKnown RBP14.87□□□□□ -0.03
Ccdc50-201ENSMUST00000039443 YrdcQ3U5F4 280 aa14.87□□□□□ -0.03
Ccdc50-201ENSMUST00000039443 Mrpl33Q9CQP0 65 aa14.87□□□□□ -0.03
Ccdc50-201ENSMUST00000039443 Cby1Q9D1C2 127 aa14.87□□□□□ -0.03
Ccdc50-201ENSMUST00000039443 Ociad2Q9D8W7 154 aa14.87□□□□□ -0.03
Ccdc50-201ENSMUST00000039443 Ighv4-1A0A075B5R5 116 aa14.86□□□□□ -0.03
Ccdc50-201ENSMUST00000039443 A0A1Y7VMQ4 148 aa14.86□□□□□ -0.03
Ccdc50-201ENSMUST00000039443 D930048N14RikA2AA67 225 aa14.86□□□□□ -0.03
Ccdc50-201ENSMUST00000039443 RbpjP31266 526 aa14.86□□□□□ -0.03
Ccdc50-201ENSMUST00000039443 7420426K07RikQ3UX66 186 aa14.86□□□□□ -0.03
Ccdc50-201ENSMUST00000039443 PdpnQ62011 172 aa14.86□□□□□ -0.03
Ccdc50-201ENSMUST00000039443 D630044L22RikQ8C701 164 aa14.86□□□□□ -0.03
Ccdc50-201ENSMUST00000039443 Hoxc12Q8K5B8 280 aa14.86□□□□□ -0.03
Ccdc50-201ENSMUST00000039443 RpeQ8VEE0 228 aa14.86□□□□□ -0.03
Ccdc50-201ENSMUST00000039443 Rbms1Q91W59 403 aaKnown RBP14.86□□□□□ -0.03
Ccdc50-201ENSMUST00000039443 Chd8Q09XV5 2582 aaKnown RBP14.86□□□□□ -0.03
Ccdc50-201ENSMUST00000039443 Ighv1-77A0A0G2JGS9 117 aa14.85□□□□□ -0.03
Ccdc50-201ENSMUST00000039443 Gm26727M0QWT1 121 aa14.85□□□□□ -0.03
Ccdc50-201ENSMUST00000039443 Gm10604Q3V0X7 143 aa14.85□□□□□ -0.03
Ccdc50-201ENSMUST00000039443 Snx22Q8C084 192 aa14.85□□□□□ -0.03
Ccdc50-201ENSMUST00000039443 GaptQ8CB93 157 aa14.85□□□□□ -0.03
Ccdc50-201ENSMUST00000039443 CklfQ9DAS1 152 aa14.85□□□□□ -0.03
Ccdc50-201ENSMUST00000039443 Wfdc2Q9DAU7 174 aa14.85□□□□□ -0.03
Ccdc50-201ENSMUST00000039443 SelenokQ9JLJ1 94 aa14.85□□□□□ -0.03
Ccdc50-201ENSMUST00000039443 Arpc1aQ9R0Q6 370 aa14.85□□□□□ -0.03
Ccdc50-201ENSMUST00000039443 NbeaQ9EPN1 2936 aa14.85□□□□□ -0.03
Ccdc50-201ENSMUST00000039443 Ccsmst1Q6RUT7 136 aa14.85□□□□□ -0.03
Ccdc50-201ENSMUST00000039443 Il22ra1Q80XZ4 581 aa14.85□□□□□ -0.03
Ccdc50-201ENSMUST00000039443 Obox8V9GWY9 217 aa14.85□□□□□ -0.03
Ccdc50-201ENSMUST00000039443 TroQ6DIC6 2087 aa14.84□□□□□ -0.03
Ccdc50-201ENSMUST00000039443 Ep300B2RWS6 2412 aa14.84□□□□□ -0.03
Ccdc50-201ENSMUST00000039443 Tmem141A2AJB2 108 aa14.84□□□□□ -0.03
Ccdc50-201ENSMUST00000039443 KprpB2RUR4 657 aa14.84□□□□□ -0.03
Ccdc50-201ENSMUST00000039443 Gm15293D3YX02 93 aa14.84□□□□□ -0.03
Ccdc50-201ENSMUST00000039443 BC107364E9Q5A2 140 aa14.84□□□□□ -0.03
Ccdc50-201ENSMUST00000039443 Myod1P10085 318 aa14.84□□□□□ -0.03
Ccdc50-201ENSMUST00000039443 Defa9P50707 93 aa14.84□□□□□ -0.03
Ccdc50-201ENSMUST00000039443 Gm10118Q8C8J5 116 aa14.84□□□□□ -0.03
Ccdc50-201ENSMUST00000039443 LbhQ9CX60 105 aa14.84□□□□□ -0.03
Ccdc50-201ENSMUST00000039443 Ubr5Q80TP3 2792 aa14.84□□□□□ -0.03
Ccdc50-201ENSMUST00000039443 BokO35425 213 aa14.84□□□□□ -0.03
Ccdc50-201ENSMUST00000039443 P01756 117 aa14.84□□□□□ -0.03
Ccdc50-201ENSMUST00000039443 P01757 117 aa14.84□□□□□ -0.03
Ccdc50-201ENSMUST00000039443 Obp2aQ8K1H9 176 aa14.84□□□□□ -0.03
Ccdc50-201ENSMUST00000039443 Ttc32Q9DAC7 148 aa14.84□□□□□ -0.03
Ccdc50-201ENSMUST00000039443 Tcrg-V6A0A075B5Y8 134 aa14.83□□□□□ -0.04
Ccdc50-201ENSMUST00000039443 Fam240bJ3QMB3 78 aa14.83□□□□□ -0.04
Ccdc50-201ENSMUST00000039443 Gm5294J3QP53 216 aa14.83□□□□□ -0.04
Ccdc50-201ENSMUST00000039443 Vsig8Q6P3A4 417 aa14.83□□□□□ -0.04
Ccdc50-201ENSMUST00000039443 Trav14-2A0A075B694 121 aa14.83□□□□□ -0.04
Ccdc50-201ENSMUST00000039443 Gm6525A0A0A6YW33 106 aa14.83□□□□□ -0.04
Ccdc50-201ENSMUST00000039443 Svs5P30933 122 aa14.83□□□□□ -0.04
Ccdc50-201ENSMUST00000039443 Gsx1P31315 261 aa14.83□□□□□ -0.04
Ccdc50-201ENSMUST00000039443 Prrx2Q06348 247 aa14.83□□□□□ -0.04
Ccdc50-201ENSMUST00000039443 Crip3Q6Q6R3 243 aa14.83□□□□□ -0.04
Ccdc50-201ENSMUST00000039443 Rnf114Q9ET26 229 aa14.83□□□□□ -0.04
Retrieved 100 of 22,080 RNA–protein pairs in 45.2 ms