RNA–Protein interactions for RNA: ENST00000630482.2

SOX2-OT-256, SOX2 overlapping transcript, human

TSL 5

Gene SOX2-OT, Length 1,012 nt, Biotype sense overlapping.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SOX2-OT-256	ENST00000630482	CFC1B	P0CG36	223 aa		6.72	□□□□□ -1.33
SOX2-OT-256	ENST00000630482	CFC1	P0CG37	223 aa		6.72	□□□□□ -1.33
SOX2-OT-256	ENST00000630482		A0A0B4J2C4	111 aa		6.71	□□□□□ -1.34
SOX2-OT-256	ENST00000630482	COX7B	P24311	80 aa		6.71	□□□□□ -1.34
SOX2-OT-256	ENST00000630482	LINC01547	P58512	204 aa	Predicted RBP	6.71	□□□□□ -1.34
SOX2-OT-256	ENST00000630482	SEC61B	P60468	96 aa	Known RBP	6.71	□□□□□ -1.34
SOX2-OT-256	ENST00000630482	C6orf99	Q4VX62	202 aa		6.71	□□□□□ -1.34
SOX2-OT-256	ENST00000630482	NHP2	Q9NX24	153 aa	Known RBP	6.71	□□□□□ -1.34
SOX2-OT-256	ENST00000630482	PRO1854	Q9UHT4	67 aa		6.71	□□□□□ -1.34
SOX2-OT-256	ENST00000630482	SLC25A20	O43772	301 aa		6.7	□□□□□ -1.34
SOX2-OT-256	ENST00000630482	FXYD2	P54710	66 aa		6.7	□□□□□ -1.34
SOX2-OT-256	ENST00000630482	RPS29	P62273	56 aa	Known RBP	6.7	□□□□□ -1.34
SOX2-OT-256	ENST00000630482	C9orf153	Q5TBE3	101 aa		6.7	□□□□□ -1.34
SOX2-OT-256	ENST00000630482	SSBP3-AS1	Q7Z2R9	100 aa		6.7	□□□□□ -1.34
SOX2-OT-256	ENST00000630482	SMIM11B	Q8TCY0	68 aa		6.7	□□□□□ -1.34
SOX2-OT-256	ENST00000630482	TRBV7-6	A0A0J9YX20	115 aa		6.69	□□□□□ -1.34
SOX2-OT-256	ENST00000630482		A0A1B0GWB2	263 aa		6.69	□□□□□ -1.34
SOX2-OT-256	ENST00000630482	BVES-AS1	Q5T3Y7	98 aa		6.69	□□□□□ -1.34
SOX2-OT-256	ENST00000630482	XP32	Q5T750	250 aa		6.69	□□□□□ -1.34
SOX2-OT-256	ENST00000630482	ST20-AS1	Q8NBB2	130 aa		6.69	□□□□□ -1.34
SOX2-OT-256	ENST00000630482	DHRS4-AS1	Q9P1J3	65 aa		6.69	□□□□□ -1.34
SOX2-OT-256	ENST00000630482	PSMB2	P49721	201 aa		6.68	□□□□□ -1.34
SOX2-OT-256	ENST00000630482	COX6C	P09669	75 aa		6.67	□□□□□ -1.34
SOX2-OT-256	ENST00000630482	C9orf118	A6NHY6	69 aa		6.66	□□□□□ -1.34
SOX2-OT-256	ENST00000630482		H0YGX0	51 aa		6.65	□□□□□ -1.34
SOX2-OT-256	ENST00000630482	SCGB1C2	P0DMR2	95 aa		6.65	□□□□□ -1.34
SOX2-OT-256	ENST00000630482	ELOF1	P60002	83 aa	Known RBP	6.65	□□□□□ -1.34
SOX2-OT-256	ENST00000630482	BATF	Q16520	125 aa		6.65	□□□□□ -1.34
SOX2-OT-256	ENST00000630482	KRTAP19-2	Q3LHN2	52 aa		6.64	□□□□□ -1.35
SOX2-OT-256	ENST00000630482	HRCT1	Q6UXD1	115 aa		6.63	□□□□□ -1.35
SOX2-OT-256	ENST00000630482	hADV29S1	A0JD25	119 aa		6.62	□□□□□ -1.35
SOX2-OT-256	ENST00000630482		K7ERJ3	54 aa		6.62	□□□□□ -1.35
SOX2-OT-256	ENST00000630482	PCP4	P48539	62 aa		6.62	□□□□□ -1.35
SOX2-OT-256	ENST00000630482	C9orf92	A6NGG3	77 aa		6.61	□□□□□ -1.35
SOX2-OT-256	ENST00000630482	LINC00575	Q6W349	94 aa		6.61	□□□□□ -1.35
SOX2-OT-256	ENST00000630482	DEFB105A	Q8NG35	78 aa		6.61	□□□□□ -1.35
SOX2-OT-256	ENST00000630482	PCP4L1	A6NKN8	68 aa		6.6	□□□□□ -1.35
SOX2-OT-256	ENST00000630482	PCOTH	Q58A44	107 aa		6.6	□□□□□ -1.35
SOX2-OT-256	ENST00000630482	SPRR1B	P22528	89 aa		6.58	□□□□□ -1.36
SOX2-OT-256	ENST00000630482	MT1H	P80294	61 aa		6.58	□□□□□ -1.36
SOX2-OT-256	ENST00000630482	LAMTOR3	Q9UHA4	124 aa		6.58	□□□□□ -1.36
SOX2-OT-256	ENST00000630482	IGLV8-61	A0A075B6I0	122 aa		6.57	□□□□□ -1.36
SOX2-OT-256	ENST00000630482	TEX49	A0A1B0GTD5	131 aa		6.57	□□□□□ -1.36
SOX2-OT-256	ENST00000630482		A0A1B0GX51	115 aa		6.57	□□□□□ -1.36
SOX2-OT-256	ENST00000630482	TRIAP1	O43715	76 aa		6.57	□□□□□ -1.36
SOX2-OT-256	ENST00000630482	DNAL4	O96015	105 aa		6.57	□□□□□ -1.36
SOX2-OT-256	ENST00000630482	LIMD2	Q9BT23	127 aa		6.57	□□□□□ -1.36
SOX2-OT-256	ENST00000630482	CRCT1	Q9UGL9	99 aa		6.57	□□□□□ -1.36
SOX2-OT-256	ENST00000630482	OCIAD2	Q56VL3	154 aa		6.56	□□□□□ -1.36
SOX2-OT-256	ENST00000630482	LYRM7	Q5U5X0	104 aa		6.56	□□□□□ -1.36
SOX2-OT-256	ENST00000630482	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	6.56	□□□□□ -1.36
SOX2-OT-256	ENST00000630482	SNHG12	Q9BXW3	62 aa		6.55	□□□□□ -1.36
SOX2-OT-256	ENST00000630482		H3BQ85	93 aa		6.54	□□□□□ -1.36
SOX2-OT-256	ENST00000630482		Q6ZQY7	126 aa		6.54	□□□□□ -1.36
SOX2-OT-256	ENST00000630482		A0A0G2JQZ4	141 aa		6.53	□□□□□ -1.36
SOX2-OT-256	ENST00000630482		F8WEM9	126 aa		6.53	□□□□□ -1.36
SOX2-OT-256	ENST00000630482	COL5A1-AS1	Q5SY13	56 aa		6.52	□□□□□ -1.37
SOX2-OT-256	ENST00000630482	CLEC2B	Q92478	149 aa		6.52	□□□□□ -1.37
SOX2-OT-256	ENST00000630482	FSIP2	Q5CZC0	6907 aa		6.52	□□□□□ -1.37
SOX2-OT-256	ENST00000630482	FLG	P20930	4061 aa	Predicted RBP	6.51	□□□□□ -1.37
SOX2-OT-256	ENST00000630482		H3BUT2	72 aa		6.51	□□□□□ -1.37
SOX2-OT-256	ENST00000630482	PPDPFL	Q8WWR9	84 aa		6.51	□□□□□ -1.37
SOX2-OT-256	ENST00000630482	IGLV5-48	A0A075B6I7	105 aa		6.5	□□□□□ -1.37
SOX2-OT-256	ENST00000630482	FABP2	P12104	132 aa		6.5	□□□□□ -1.37
SOX2-OT-256	ENST00000630482	ATXN8	Q156A1	80 aa		6.5	□□□□□ -1.37
SOX2-OT-256	ENST00000630482	FAM218A	Q96MZ4	157 aa		6.5	□□□□□ -1.37
SOX2-OT-256	ENST00000630482	NAA38	Q9BRA0	125 aa	Known RBP	6.5	□□□□□ -1.37
SOX2-OT-256	ENST00000630482	ORMDL1	Q9P0S3	153 aa		6.5	□□□□□ -1.37
SOX2-OT-256	ENST00000630482	TRBV20-1	A0A075B6N2	111 aa		6.49	□□□□□ -1.37
SOX2-OT-256	ENST00000630482	SMIM29	Q86T20	159 aa		6.49	□□□□□ -1.37
SOX2-OT-256	ENST00000630482	TMEM256-PLSCR3	K7ERE1	68 aa		6.48	□□□□□ -1.37
SOX2-OT-256	ENST00000630482	TRAC	P01848	142 aa		6.48	□□□□□ -1.37
SOX2-OT-256	ENST00000630482	CD164	Q04900	197 aa		6.48	□□□□□ -1.37
SOX2-OT-256	ENST00000630482	LST1	O00453	97 aa		6.47	□□□□□ -1.37
SOX2-OT-256	ENST00000630482	TAX1BP3	O14907	124 aa		6.47	□□□□□ -1.37
SOX2-OT-256	ENST00000630482	KRTAP10-6	P60371	365 aa	Predicted RBP	6.47	□□□□□ -1.37
SOX2-OT-256	ENST00000630482	C1orf195	Q5TG92	126 aa		6.47	□□□□□ -1.37
SOX2-OT-256	ENST00000630482		A0A1W2PPM0	123 aa		6.45	□□□□□ -1.38
SOX2-OT-256	ENST00000630482	TCL1B	O95988	128 aa		6.45	□□□□□ -1.38
SOX2-OT-256	ENST00000630482	RPL37	P61927	97 aa	Known RBP	6.45	□□□□□ -1.38
SOX2-OT-256	ENST00000630482	BAALC-AS2	P0C853	105 aa		6.44	□□□□□ -1.38
SOX2-OT-256	ENST00000630482	NDUFV3	P56181	108 aa	Known RBP	6.44	□□□□□ -1.38
SOX2-OT-256	ENST00000630482		Q5XG85	94 aa		6.44	□□□□□ -1.38
SOX2-OT-256	ENST00000630482		Q6JHZ5	121 aa		6.43	□□□□□ -1.38
SOX2-OT-256	ENST00000630482		H3BMG7	143 aa		6.42	□□□□□ -1.38
SOX2-OT-256	ENST00000630482	UBE2V1	Q13404	147 aa		6.41	□□□□□ -1.38
SOX2-OT-256	ENST00000630482	SPCS1	Q9Y6A9	102 aa		6.41	□□□□□ -1.38
SOX2-OT-256	ENST00000630482		C9JAW5	83 aa		6.4	□□□□□ -1.38
SOX2-OT-256	ENST00000630482		M0R2T5	61 aa		6.4	□□□□□ -1.38
SOX2-OT-256	ENST00000630482	COX6B2	Q6YFQ2	88 aa		6.4	□□□□□ -1.38
SOX2-OT-256	ENST00000630482	ANKRD29	Q8N6D5	301 aa		6.39	□□□□□ -1.39
SOX2-OT-256	ENST00000630482	GTF2H5	Q6ZYL4	71 aa		6.38	□□□□□ -1.39
SOX2-OT-256	ENST00000630482	DSCR8	Q96T75	97 aa		6.38	□□□□□ -1.39
SOX2-OT-256	ENST00000630482	RBM3	P98179	157 aa	Known RBP	6.37	□□□□□ -1.39
SOX2-OT-256	ENST00000630482		A0A1B0GV72	72 aa		6.36	□□□□□ -1.39
SOX2-OT-256	ENST00000630482	JMJD7-PLA2G4B	H0Y9G9	81 aa		6.36	□□□□□ -1.39
SOX2-OT-256	ENST00000630482	IGFL1	Q6UW32	110 aa		6.35	□□□□□ -1.39
SOX2-OT-256	ENST00000630482		H3BT86	120 aa		6.33	□□□□□ -1.4
SOX2-OT-256	ENST00000630482		K7EP34	96 aa		6.33	□□□□□ -1.4
SOX2-OT-256	ENST00000630482	TEN1	Q86WV5	123 aa		6.33	□□□□□ -1.4

Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms