RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 STX12Q86Y82 276 aa0.44□□□□□ -2.34
VBP1-204ENST00000625964 MCFD2Q8NI22 146 aa0.44□□□□□ -2.34
VBP1-204ENST00000625964 Q96NJ1 140 aa0.44□□□□□ -2.34
VBP1-204ENST00000625964 RNASE7Q9H1E1 156 aaKnown RBP0.44□□□□□ -2.34
VBP1-204ENST00000625964 ST20Q9HBF5 79 aa0.44□□□□□ -2.34
VBP1-204ENST00000625964 TMEM167BQ9NRX6 74 aa0.44□□□□□ -2.34
VBP1-204ENST00000625964 LSM5Q9Y4Y9 91 aaKnown RBP0.44□□□□□ -2.34
VBP1-204ENST00000625964 TRAV9-1A0A075B6T8 112 aa0.43□□□□□ -2.34
VBP1-204ENST00000625964 ETDCA0A1B0GVM5 59 aa0.43□□□□□ -2.34
VBP1-204ENST00000625964 ATP5HO75947 161 aa0.43□□□□□ -2.34
VBP1-204ENST00000625964 TCL1BO95988 128 aa0.43□□□□□ -2.34
VBP1-204ENST00000625964 FCER1GP30273 86 aa0.43□□□□□ -2.34
VBP1-204ENST00000625964 DEFA1P59665 94 aa0.43□□□□□ -2.34
VBP1-204ENST00000625964 GNGT1P63211 74 aa0.43□□□□□ -2.34
VBP1-204ENST00000625964 MT1XP80297 61 aa0.43□□□□□ -2.34
VBP1-204ENST00000625964 MRPS36P82909 103 aaKnown RBP0.43□□□□□ -2.34
VBP1-204ENST00000625964 ALKAL2Q6UX46 152 aa0.43□□□□□ -2.34
VBP1-204ENST00000625964 C9orf62Q8N4C0 152 aa0.43□□□□□ -2.34
VBP1-204ENST00000625964 SMIM4Q8WVI0 70 aa0.43□□□□□ -2.34
VBP1-204ENST00000625964 PRO1933Q9H354 126 aa0.43□□□□□ -2.34
VBP1-204ENST00000625964 KCNQ1DNQ9H478 68 aa0.43□□□□□ -2.34
VBP1-204ENST00000625964 SPANXA1Q9NS26 97 aa0.43□□□□□ -2.34
VBP1-204ENST00000625964 FAM236AA0A1B0GUQ0 79 aa0.43□□□□□ -2.34
VBP1-204ENST00000625964 FAM236BA0A1B0GV22 79 aa0.43□□□□□ -2.34
VBP1-204ENST00000625964 INMT-MINDY4F8WBC2 141 aa0.43□□□□□ -2.34
VBP1-204ENST00000625964 SIX6O95475 246 aa0.43□□□□□ -2.34
VBP1-204ENST00000625964 SPRR1BP22528 89 aa0.43□□□□□ -2.34
VBP1-204ENST00000625964 FAUP35544 74 aaKnown RBP0.43□□□□□ -2.34
VBP1-204ENST00000625964 CDC34P49427 236 aaPredicted RBP0.43□□□□□ -2.34
VBP1-204ENST00000625964 AKR1D1P51857 326 aa0.43□□□□□ -2.34
VBP1-204ENST00000625964 NDUFA6P56556 154 aa0.43□□□□□ -2.34
VBP1-204ENST00000625964 VBP1P61758 197 aa0.43□□□□□ -2.34
VBP1-204ENST00000625964 LSM3P62310 102 aaKnown RBP0.43□□□□□ -2.34
VBP1-204ENST00000625964 RPL39P62891 51 aaKnown RBP0.43□□□□□ -2.34
VBP1-204ENST00000625964 SMIM15Q7Z3B0 74 aa0.43□□□□□ -2.34
VBP1-204ENST00000625964 BAGE2Q86Y30 109 aa0.43□□□□□ -2.34
VBP1-204ENST00000625964 CNFNQ9BYD5 112 aa0.43□□□□□ -2.34
VBP1-204ENST00000625964 LAMTOR3Q9UHA4 124 aa0.43□□□□□ -2.34
VBP1-204ENST00000625964 NDUFB6O95139 128 aa0.42□□□□□ -2.34
VBP1-204ENST00000625964 PPP1R17O96001 155 aa0.42□□□□□ -2.34
VBP1-204ENST00000625964 IFI27P40305 119 aaPredicted RBP0.42□□□□□ -2.34
VBP1-204ENST00000625964 S100A12P80511 92 aa0.42□□□□□ -2.34
VBP1-204ENST00000625964 Q6ZRX8 168 aa0.42□□□□□ -2.34
VBP1-204ENST00000625964 KRTAP19-3Q7Z4W3 81 aa0.42□□□□□ -2.34
VBP1-204ENST00000625964 COX7B2Q8TF08 81 aa0.42□□□□□ -2.34
VBP1-204ENST00000625964 CNBD2Q96M20 576 aa0.42□□□□□ -2.34
VBP1-204ENST00000625964 TCEAL7Q9BRU2 100 aa0.42□□□□□ -2.34
VBP1-204ENST00000625964 TMEM191AQ9H0A3 160 aa0.42□□□□□ -2.34
VBP1-204ENST00000625964 CDKN2A-AS1Q9UH64 79 aa0.42□□□□□ -2.34
VBP1-204ENST00000625964 TRBV10-3A0A0K0K1G6 114 aa0.41□□□□□ -2.34
VBP1-204ENST00000625964 PET100P0DJ07 73 aa0.41□□□□□ -2.34
VBP1-204ENST00000625964 MT1GP13640 62 aa0.41□□□□□ -2.34
VBP1-204ENST00000625964 SPINK7P58062 85 aa0.41□□□□□ -2.34
VBP1-204ENST00000625964 SEC11AP67812 179 aa0.41□□□□□ -2.34
VBP1-204ENST00000625964 SERF2P84101 59 aa0.41□□□□□ -2.34
VBP1-204ENST00000625964 COX17Q14061 63 aa0.41□□□□□ -2.34
VBP1-204ENST00000625964 ZNF345Q14585 488 aa0.41□□□□□ -2.34
VBP1-204ENST00000625964 NEDD8Q15843 81 aa0.41□□□□□ -2.34
VBP1-204ENST00000625964 NDUFA5Q16718 116 aa0.41□□□□□ -2.34
VBP1-204ENST00000625964 H1FX-AS1Q4G0G2 97 aa0.41□□□□□ -2.34
VBP1-204ENST00000625964 SOSTDC1Q6X4U4 206 aa0.41□□□□□ -2.34
VBP1-204ENST00000625964 TOMM5Q8N4H5 51 aa0.41□□□□□ -2.34
VBP1-204ENST00000625964 TMEM141Q96I45 108 aa0.41□□□□□ -2.34
VBP1-204ENST00000625964 AMELXQ99217 191 aa0.41□□□□□ -2.34
VBP1-204ENST00000625964 C2orf88Q9BSF0 95 aa0.41□□□□□ -2.34
VBP1-204ENST00000625964 PSMG3Q9BT73 122 aaPredicted RBP0.41□□□□□ -2.34
VBP1-204ENST00000625964 SMIM3Q9BZL3 60 aa0.41□□□□□ -2.34
VBP1-204ENST00000625964 ERG28Q9UKR5 140 aa0.41□□□□□ -2.34
VBP1-204ENST00000625964 TNFSF18Q9UNG2 199 aa0.41□□□□□ -2.34
VBP1-204ENST00000625964 TRBV20OR9-2A0A075B6H5 130 aa0.4□□□□□ -2.35
VBP1-204ENST00000625964 TRBV10-2A0A0K0K1G8 114 aa0.4□□□□□ -2.35
VBP1-204ENST00000625964 CTXND1A0A1B0GTU2 59 aa0.4□□□□□ -2.35
VBP1-204ENST00000625964 NAP1L6A6NFF2 107 aa0.4□□□□□ -2.35
VBP1-204ENST00000625964 CCDC160A6NGH7 325 aa0.4□□□□□ -2.35
VBP1-204ENST00000625964 D6R8Y8 96 aa0.4□□□□□ -2.35
VBP1-204ENST00000625964 LST1O00453 97 aa0.4□□□□□ -2.35
VBP1-204ENST00000625964 LEPROTO15243 131 aa0.4□□□□□ -2.35
VBP1-204ENST00000625964 RPL35P42766 123 aaKnown RBP0.4□□□□□ -2.35
VBP1-204ENST00000625964 KLKP1Q107X0 134 aa0.4□□□□□ -2.35
VBP1-204ENST00000625964 WFDC13Q8IUB5 93 aa0.4□□□□□ -2.35
VBP1-204ENST00000625964 PLAC4Q8WY50 150 aa0.4□□□□□ -2.35
VBP1-204ENST00000625964 C20orf78Q9BR46 151 aa0.4□□□□□ -2.35
VBP1-204ENST00000625964 CRIPTQ9P021 101 aa0.4□□□□□ -2.35
VBP1-204ENST00000625964 HSPB11Q9Y547 144 aa0.4□□□□□ -2.35
VBP1-204ENST00000625964 A0A087WXM4 84 aa0.39□□□□□ -2.35
VBP1-204ENST00000625964 TRBV7-7A0A0K0K1E9 115 aa0.39□□□□□ -2.35
VBP1-204ENST00000625964 TEX49A0A1B0GTD5 131 aa0.39□□□□□ -2.35
VBP1-204ENST00000625964 H0YAA0 97 aa0.39□□□□□ -2.35
VBP1-204ENST00000625964 NCR3O14931 201 aa0.39□□□□□ -2.35
VBP1-204ENST00000625964 MT1EP04732 61 aa0.39□□□□□ -2.35
VBP1-204ENST00000625964 DDTP30046 118 aa0.39□□□□□ -2.35
VBP1-204ENST00000625964 LINC00158P58513 81 aa0.39□□□□□ -2.35
VBP1-204ENST00000625964 KRTAP19-7Q3SYF9 63 aa0.39□□□□□ -2.35
VBP1-204ENST00000625964 Q5BKY6 102 aa0.39□□□□□ -2.35
VBP1-204ENST00000625964 LINC00299Q6ZSB3 139 aa0.39□□□□□ -2.35
VBP1-204ENST00000625964 LCA10Q71F78 164 aa0.39□□□□□ -2.35
VBP1-204ENST00000625964 PRR15Q8IV56 129 aa0.39□□□□□ -2.35
VBP1-204ENST00000625964 DEFB105AQ8NG35 78 aa0.39□□□□□ -2.35
VBP1-204ENST00000625964 SMIM2Q9BVW6 85 aa0.39□□□□□ -2.35
VBP1-204ENST00000625964 BIN3Q9NQY0 253 aa0.39□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms