RNA–Protein interactions for RNA: ENST00000623342.1

SND1-IT1-201, SND1 intronic transcript 1, humanhuman

BASIC

Gene SND1-IT1, Length 2,481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1-201ENST00000623342 C9orf163Q8N9P6 203 aa5.23□□□□□ -1.57
SND1-IT1-201ENST00000623342 J3QL48 77 aa5.22□□□□□ -1.57
SND1-IT1-201ENST00000623342 LINC00476Q8WZB0 136 aa5.22□□□□□ -1.57
SND1-IT1-201ENST00000623342 J3KT08 172 aa5.22□□□□□ -1.57
SND1-IT1-201ENST00000623342 PHF5AQ7RTV0 110 aaKnown RBP5.22□□□□□ -1.57
SND1-IT1-201ENST00000623342 HIGD2AQ9BW72 106 aa5.22□□□□□ -1.57
SND1-IT1-201ENST00000623342 DNAH6Q9C0G6 4158 aa5.22□□□□□ -1.57
SND1-IT1-201ENST00000623342 FRAS1Q86XX4 4008 aa5.22□□□□□ -1.57
SND1-IT1-201ENST00000623342 RPS28P62857 69 aaKnown RBP5.21□□□□□ -1.57
SND1-IT1-201ENST00000623342 KLKP1Q107X0 134 aa5.21□□□□□ -1.57
SND1-IT1-201ENST00000623342 H0Y9J4 135 aa5.2□□□□□ -1.58
SND1-IT1-201ENST00000623342 Q6ZRN7 208 aaPredicted RBP5.2□□□□□ -1.58
SND1-IT1-201ENST00000623342 KRTAP11-1Q8IUC1 163 aa5.2□□□□□ -1.58
SND1-IT1-201ENST00000623342 DPH3Q96FX2 82 aa5.2□□□□□ -1.58
SND1-IT1-201ENST00000623342 LINC00474Q9P2X8 69 aa5.2□□□□□ -1.58
SND1-IT1-201ENST00000623342 IGLV8-61A0A075B6I0 122 aa5.2□□□□□ -1.58
SND1-IT1-201ENST00000623342 IGFL1Q6UW32 110 aa5.2□□□□□ -1.58
SND1-IT1-201ENST00000623342 EPM2AB3EWF7 344 aa5.19□□□□□ -1.58
SND1-IT1-201ENST00000623342 SNURFQ9Y675 71 aa5.19□□□□□ -1.58
SND1-IT1-201ENST00000623342 H7BZZ5 65 aa5.18□□□□□ -1.58
SND1-IT1-201ENST00000623342 UBE2AP49459 152 aa5.18□□□□□ -1.58
SND1-IT1-201ENST00000623342 OCR1Q9BZK8 76 aa5.18□□□□□ -1.58
SND1-IT1-201ENST00000623342 DNAH8Q96JB1 4490 aa5.18□□□□□ -1.58
SND1-IT1-201ENST00000623342 A0A0G2JQZ4 141 aa5.17□□□□□ -1.58
SND1-IT1-201ENST00000623342 SPRR1BP22528 89 aa5.17□□□□□ -1.58
SND1-IT1-201ENST00000623342 DSCR10P59022 87 aa5.17□□□□□ -1.58
SND1-IT1-201ENST00000623342 DNAH17Q9UFH2 4485 aa5.17□□□□□ -1.58
SND1-IT1-201ENST00000623342 FAM236DA0A1B0GTK5 79 aa5.17□□□□□ -1.58
SND1-IT1-201ENST00000623342 FAM236CP0DP71 79 aa5.17□□□□□ -1.58
SND1-IT1-201ENST00000623342 NDUFC1O43677 76 aa5.16□□□□□ -1.58
SND1-IT1-201ENST00000623342 DNAH11Q96DT5 4516 aa5.16□□□□□ -1.58
SND1-IT1-201ENST00000623342 PANO1I0J062 215 aa5.16□□□□□ -1.58
SND1-IT1-201ENST00000623342 TMEM254Q8TBM7 123 aa5.16□□□□□ -1.58
SND1-IT1-201ENST00000623342 K7EQZ3 153 aa5.15□□□□□ -1.58
SND1-IT1-201ENST00000623342 A0A087WSZ3 146 aa5.15□□□□□ -1.59
SND1-IT1-201ENST00000623342 DNAH5Q8TE73 4624 aa5.14□□□□□ -1.59
SND1-IT1-201ENST00000623342 SPACA4Q8TDM5 124 aa5.14□□□□□ -1.59
SND1-IT1-201ENST00000623342 A0A087WTM6 91 aa5.14□□□□□ -1.59
SND1-IT1-201ENST00000623342 KRTAP13-1Q8IUC0 172 aa5.13□□□□□ -1.59
SND1-IT1-201ENST00000623342 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.13□□□□□ -1.59
SND1-IT1-201ENST00000623342 A0A0U1RQV1 116 aa5.13□□□□□ -1.59
SND1-IT1-201ENST00000623342 LCE2BO14633 110 aa5.13□□□□□ -1.59
SND1-IT1-201ENST00000623342 OXTP01178 125 aa5.13□□□□□ -1.59
SND1-IT1-201ENST00000623342 FAM30AQ9NZY2 134 aa5.13□□□□□ -1.59
SND1-IT1-201ENST00000623342 FAT2Q9NYQ8 4349 aa5.12□□□□□ -1.59
SND1-IT1-201ENST00000623342 SACSQ9NZJ4 4579 aa5.12□□□□□ -1.59
SND1-IT1-201ENST00000623342 HCG22E2RYF7 251 aa5.12□□□□□ -1.59
SND1-IT1-201ENST00000623342 DEFB116Q30KQ4 102 aa5.12□□□□□ -1.59
SND1-IT1-201ENST00000623342 SERP1Q9Y6X1 66 aa5.11□□□□□ -1.59
SND1-IT1-201ENST00000623342 Q6ZR54 194 aa5.11□□□□□ -1.59
SND1-IT1-201ENST00000623342 PKD1P98161 4303 aa5.1□□□□□ -1.59
SND1-IT1-201ENST00000623342 LCE6AA0A183 80 aa5.1□□□□□ -1.59
SND1-IT1-201ENST00000623342 RTL8CO15255 209 aa5.1□□□□□ -1.59
SND1-IT1-201ENST00000623342 ATP5EP56381 51 aaPredicted RBP5.1□□□□□ -1.59
SND1-IT1-201ENST00000623342 PKHD1P08F94 4074 aa5.1□□□□□ -1.59
SND1-IT1-201ENST00000623342 RPL37AP61513 92 aaKnown RBP5.07□□□□□ -1.6
SND1-IT1-201ENST00000623342 SVIPQ8NHG7 77 aa5.07□□□□□ -1.6
SND1-IT1-201ENST00000623342 LINC00472Q9H8W2 130 aa5.07□□□□□ -1.6
SND1-IT1-201ENST00000623342 LINC00483Q53H64 154 aa5.06□□□□□ -1.6
SND1-IT1-201ENST00000623342 C5orf47Q569G3 176 aa5.06□□□□□ -1.6
SND1-IT1-201ENST00000623342 WFDC13Q8IUB5 93 aa5.06□□□□□ -1.6
SND1-IT1-201ENST00000623342 PLAC8Q9NZF1 115 aa5.06□□□□□ -1.6
SND1-IT1-201ENST00000623342 KMT2CQ8NEZ4 4911 aaKnown RBP5.06□□□□□ -1.6
SND1-IT1-201ENST00000623342 IGLV5-52A0A0A0MRZ9 124 aa5.06□□□□□ -1.6
SND1-IT1-201ENST00000623342 PRR15Q8IV56 129 aa5.06□□□□□ -1.6
SND1-IT1-201ENST00000623342 PSORS1C2Q9UIG4 136 aa5.06□□□□□ -1.6
SND1-IT1-201ENST00000623342 ZNF706Q9Y5V0 76 aaPredicted RBP5.06□□□□□ -1.6
SND1-IT1-201ENST00000623342 IGLV9-49A0A0B4J1Y8 123 aa5.05□□□□□ -1.6
SND1-IT1-201ENST00000623342 A8MWP4 228 aa5.05□□□□□ -1.6
SND1-IT1-201ENST00000623342 C1orf134Q5TEV5 83 aa5.05□□□□□ -1.6
SND1-IT1-201ENST00000623342 LRP1BQ9NZR2 4599 aa5.05□□□□□ -1.6
SND1-IT1-201ENST00000623342 KRTAP29-1A8MX34 341 aaPredicted RBP5.04□□□□□ -1.6
SND1-IT1-201ENST00000623342 Q5XG85 94 aa5.04□□□□□ -1.6
SND1-IT1-201ENST00000623342 ZCCHC13Q8WW36 166 aaKnown RBP5.04□□□□□ -1.6
SND1-IT1-201ENST00000623342 CASC2Q6XLA1 102 aa5.03□□□□□ -1.6
SND1-IT1-201ENST00000623342 ALMS1Q8TCU4 4167 aa5.03□□□□□ -1.6
SND1-IT1-201ENST00000623342 ZNF861PO60384 105 aa5.03□□□□□ -1.6
SND1-IT1-201ENST00000623342 LY6G6CO95867 125 aa5.02□□□□□ -1.61
SND1-IT1-201ENST00000623342 WWC2-AS2Q96NR7 200 aa5.02□□□□□ -1.61
SND1-IT1-201ENST00000623342 SMIM26A0A096LP01 95 aa5.01□□□□□ -1.61
SND1-IT1-201ENST00000623342 NDUFB1O75438 58 aa5.01□□□□□ -1.61
SND1-IT1-201ENST00000623342 MP68P56378 58 aa5.01□□□□□ -1.61
SND1-IT1-201ENST00000623342 C4orf26Q17RF5 130 aa5.01□□□□□ -1.61
SND1-IT1-201ENST00000623342 Q96NJ1 140 aa5□□□□□ -1.61
SND1-IT1-201ENST00000623342 MOBPQ13875 183 aa5□□□□□ -1.61
SND1-IT1-201ENST00000623342 HRCT1Q6UXD1 115 aa5□□□□□ -1.61
SND1-IT1-201ENST00000623342 MMP24-AS1A0A0U1RRL7 71 aa4.99□□□□□ -1.61
SND1-IT1-201ENST00000623342 ANAPC11Q9NYG5 84 aa4.99□□□□□ -1.61
SND1-IT1-201ENST00000623342 IGLV7-43P04211 117 aa4.98□□□□□ -1.61
SND1-IT1-201ENST00000623342 FP248Q71RG6 208 aaPredicted RBP4.98□□□□□ -1.61
SND1-IT1-201ENST00000623342 H0Y9P7 68 aa4.97□□□□□ -1.61
SND1-IT1-201ENST00000623342 H3BPC8 53 aa4.97□□□□□ -1.61
SND1-IT1-201ENST00000623342 LINC00208Q96KT6 92 aa4.97□□□□□ -1.61
SND1-IT1-201ENST00000623342 TRAV22A0A0B4J277 110 aa4.97□□□□□ -1.61
SND1-IT1-201ENST00000623342 hDV103S1A0JD37 113 aa4.97□□□□□ -1.61
SND1-IT1-201ENST00000623342 VPS13BQ7Z7G8 4022 aa4.96□□□□□ -1.62
SND1-IT1-201ENST00000623342 FAM229BQ4G0N7 80 aa4.96□□□□□ -1.62
SND1-IT1-201ENST00000623342 KRTAP10-2P60368 255 aa4.95□□□□□ -1.62
SND1-IT1-201ENST00000623342 ASB16-AS1Q495Z4 193 aa4.95□□□□□ -1.62
SND1-IT1-201ENST00000623342 C8orf17Q9NRJ1 99 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms