RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 LINC00336Q6ZUF6 198 aa6.03□□□□□ -1.44
GGA3-223ENST00000621870 KCNQ1DNQ9H478 68 aa6.03□□□□□ -1.44
GGA3-223ENST00000621870 K7ERS5 55 aa6.03□□□□□ -1.44
GGA3-223ENST00000621870 ZNF861PO60384 105 aa6.02□□□□□ -1.44
GGA3-223ENST00000621870 MXRA5Q9NR99 2828 aa6.02□□□□□ -1.44
GGA3-223ENST00000621870 A0A1W2PNN7 141 aa6.02□□□□□ -1.45
GGA3-223ENST00000621870 hDV103S1A0JD37 113 aa6.02□□□□□ -1.45
GGA3-223ENST00000621870 LINC00528Q8N1L1 170 aa6.01□□□□□ -1.45
GGA3-223ENST00000621870 PSORS1C2Q9UIG4 136 aa6.01□□□□□ -1.45
GGA3-223ENST00000621870 SMIM29Q86T20 159 aa6□□□□□ -1.45
GGA3-223ENST00000621870 Q6ZQT0 140 aa6□□□□□ -1.45
GGA3-223ENST00000621870 TMEM254Q8TBM7 123 aa6□□□□□ -1.45
GGA3-223ENST00000621870 OTOGQ6ZRI0 2925 aa6□□□□□ -1.45
GGA3-223ENST00000621870 SMIM26A0A096LP01 95 aa5.99□□□□□ -1.45
GGA3-223ENST00000621870 C1orf64Q8NEQ6 169 aa5.99□□□□□ -1.45
GGA3-223ENST00000621870 A0A0G2JQZ4 141 aa5.99□□□□□ -1.45
GGA3-223ENST00000621870 CXCL6P80162 114 aa5.99□□□□□ -1.45
GGA3-223ENST00000621870 PRR15LQ9BU68 103 aa5.99□□□□□ -1.45
GGA3-223ENST00000621870 LINC00313P59037 77 aa5.99□□□□□ -1.45
GGA3-223ENST00000621870 PMAIP1Q13794 54 aa5.98□□□□□ -1.45
GGA3-223ENST00000621870 A6NED7 52 aa5.97□□□□□ -1.45
GGA3-223ENST00000621870 Q96NJ1 140 aa5.97□□□□□ -1.45
GGA3-223ENST00000621870 TLX1NBP0CAT3 122 aa5.97□□□□□ -1.45
GGA3-223ENST00000621870 ATP5EP56381 51 aaPredicted RBP5.97□□□□□ -1.45
GGA3-223ENST00000621870 CNBPP62633 177 aaKnown RBP5.97□□□□□ -1.45
GGA3-223ENST00000621870 LINC00304Q8N9R0 145 aa5.96□□□□□ -1.45
GGA3-223ENST00000621870 RPS28P62857 69 aaKnown RBP5.96□□□□□ -1.46
GGA3-223ENST00000621870 IGLV7-43P04211 117 aa5.96□□□□□ -1.46
GGA3-223ENST00000621870 A0A1B0GW54 56 aa5.95□□□□□ -1.46
GGA3-223ENST00000621870 SSBP3-AS1Q7Z2R9 100 aa5.95□□□□□ -1.46
GGA3-223ENST00000621870 TRBV7-4A0A0J9YYF1 115 aa5.95□□□□□ -1.46
GGA3-223ENST00000621870 Q8N377 158 aa5.95□□□□□ -1.46
GGA3-223ENST00000621870 ERC2-IT1O76042 136 aa5.94□□□□□ -1.46
GGA3-223ENST00000621870 PKD1L1Q8TDX9 2849 aa5.94□□□□□ -1.46
GGA3-223ENST00000621870 ATP11AUNQ6ZP68 121 aa5.94□□□□□ -1.46
GGA3-223ENST00000621870 LOC110117498A0A087WWA1 95 aa5.94□□□□□ -1.46
GGA3-223ENST00000621870 IGFL1Q6UW32 110 aa5.94□□□□□ -1.46
GGA3-223ENST00000621870 BSNQ9UPA5 3926 aa5.94□□□□□ -1.46
GGA3-223ENST00000621870 TP53AIP1Q9HCN2 124 aa5.92□□□□□ -1.46
GGA3-223ENST00000621870 FBN1P35555 2871 aaKnown RBP5.92□□□□□ -1.46
GGA3-223ENST00000621870 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.91□□□□□ -1.46
GGA3-223ENST00000621870 C7orf65Q6ZTY9 151 aa5.91□□□□□ -1.46
GGA3-223ENST00000621870 C9orf92A6NGG3 77 aa5.91□□□□□ -1.46
GGA3-223ENST00000621870 TRAV22A0A0B4J277 110 aa5.9□□□□□ -1.46
GGA3-223ENST00000621870 PLA2G2DQ9UNK4 145 aa5.9□□□□□ -1.46
GGA3-223ENST00000621870 LINC01600Q96MT4 127 aa5.9□□□□□ -1.46
GGA3-223ENST00000621870 SPAG11AQ6PDA7 123 aa5.9□□□□□ -1.47
GGA3-223ENST00000621870 K7EQZ3 153 aa5.9□□□□□ -1.47
GGA3-223ENST00000621870 TENM1Q9UKZ4 2725 aa5.89□□□□□ -1.47
GGA3-223ENST00000621870 COX6B2Q6YFQ2 88 aa5.89□□□□□ -1.47
GGA3-223ENST00000621870 OBSCN-AS1Q96MR7 158 aa5.89□□□□□ -1.47
GGA3-223ENST00000621870 SPRR4Q96PI1 79 aa5.89□□□□□ -1.47
GGA3-223ENST00000621870 PDZD2O15018 2839 aa5.88□□□□□ -1.47
GGA3-223ENST00000621870 A8MWP4 228 aa5.88□□□□□ -1.47
GGA3-223ENST00000621870 DSCR10P59022 87 aa5.88□□□□□ -1.47
GGA3-223ENST00000621870 KRTAP1-5Q9BYS1 174 aa5.86□□□□□ -1.47
GGA3-223ENST00000621870 MRPL34Q9BQ48 92 aaKnown RBP5.86□□□□□ -1.47
GGA3-223ENST00000621870 C8orf87E5RJ46 101 aa5.85□□□□□ -1.47
GGA3-223ENST00000621870 PSPHP1O15172 72 aa5.85□□□□□ -1.47
GGA3-223ENST00000621870 FAM104AQ969W3 186 aa5.84□□□□□ -1.47
GGA3-223ENST00000621870 PRR26Q8N8Z3 221 aa5.83□□□□□ -1.48
GGA3-223ENST00000621870 PRR15Q8IV56 129 aa5.83□□□□□ -1.48
GGA3-223ENST00000621870 TENM2Q9NT68 2774 aa5.83□□□□□ -1.48
GGA3-223ENST00000621870 C8orf17Q9NRJ1 99 aa5.83□□□□□ -1.48
GGA3-223ENST00000621870 A0A1W2PNM2 257 aa5.82□□□□□ -1.48
GGA3-223ENST00000621870 ACYP2P14621 99 aa5.82□□□□□ -1.48
GGA3-223ENST00000621870 A0A1B0GVX0 72 aa5.81□□□□□ -1.48
GGA3-223ENST00000621870 VPS13CQ709C8 3753 aa5.81□□□□□ -1.48
GGA3-223ENST00000621870 IGLV5-37A0A075B6J1 123 aa5.8□□□□□ -1.48
GGA3-223ENST00000621870 LCE6AA0A183 80 aa5.8□□□□□ -1.48
GGA3-223ENST00000621870 CD164Q04900 197 aa5.79□□□□□ -1.48
GGA3-223ENST00000621870 LOC101927531A0A1B0GV80 90 aa5.78□□□□□ -1.48
GGA3-223ENST00000621870 VWFP04275 2813 aa5.77□□□□□ -1.49
GGA3-223ENST00000621870 IGLV8-61A0A075B6I0 122 aa5.77□□□□□ -1.49
GGA3-223ENST00000621870 H3BPC8 53 aa5.77□□□□□ -1.49
GGA3-223ENST00000621870 A0A1B0GU69 56 aa5.77□□□□□ -1.49
GGA3-223ENST00000621870 KRTAP10-2P60368 255 aa5.75□□□□□ -1.49
GGA3-223ENST00000621870 SRRM2Q9UQ35 2752 aaKnown RBP5.75□□□□□ -1.49
GGA3-223ENST00000621870 PLAC8Q9NZF1 115 aa5.75□□□□□ -1.49
GGA3-223ENST00000621870 Q8NDZ9 215 aa5.75□□□□□ -1.49
GGA3-223ENST00000621870 TGP01266 2768 aa5.74□□□□□ -1.49
GGA3-223ENST00000621870 IGLV5-48A0A075B6I7 105 aa5.74□□□□□ -1.49
GGA3-223ENST00000621870 CYSTM1Q9H1C7 97 aa5.74□□□□□ -1.49
GGA3-223ENST00000621870 IGLV7-46A0A075B6I9 117 aa5.73□□□□□ -1.49
GGA3-223ENST00000621870 KRTAP10-1P60331 282 aa5.73□□□□□ -1.49
GGA3-223ENST00000621870 H7BZZ5 65 aa5.72□□□□□ -1.49
GGA3-223ENST00000621870 H3BS24 57 aa5.71□□□□□ -1.49
GGA3-223ENST00000621870 KLKP1Q107X0 134 aa5.71□□□□□ -1.5
GGA3-223ENST00000621870 KRTAP26-1Q6PEX3 210 aa5.7□□□□□ -1.5
GGA3-223ENST00000621870 Q5VSD8 79 aa5.69□□□□□ -1.5
GGA3-223ENST00000621870 RBM12B-AS1Q9P1G2 102 aa5.68□□□□□ -1.5
GGA3-223ENST00000621870 Q6ZSA8 131 aa5.67□□□□□ -1.5
GGA3-223ENST00000621870 FAM229BQ4G0N7 80 aa5.67□□□□□ -1.5
GGA3-223ENST00000621870 Q5XG85 94 aa5.67□□□□□ -1.5
GGA3-223ENST00000621870 SPRR1AP35321 89 aa5.66□□□□□ -1.5
GGA3-223ENST00000621870 Q6ZR54 194 aa5.66□□□□□ -1.5
GGA3-223ENST00000621870 PANO1I0J062 215 aa5.66□□□□□ -1.5
GGA3-223ENST00000621870 Q8N1X5 172 aa5.66□□□□□ -1.5
GGA3-223ENST00000621870 COA5Q86WW8 74 aa5.63□□□□□ -1.51
GGA3-223ENST00000621870 OXTP01178 125 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms