RNA–Protein interactions for RNA: ENST00000621016.4

CDH1-214, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-214ENST00000621016 A0A0G2JQZ4 141 aa6.95□□□□□ -1.3
CDH1-214ENST00000621016 A0A1W2PNN7 141 aa6.95□□□□□ -1.3
CDH1-214ENST00000621016 PHF5AQ7RTV0 110 aaKnown RBP6.95□□□□□ -1.3
CDH1-214ENST00000621016 IGKV2-24A0A0C4DH68 120 aa6.94□□□□□ -1.3
CDH1-214ENST00000621016 LINC00208Q96KT6 92 aa6.94□□□□□ -1.3
CDH1-214ENST00000621016 B9D2Q9BPU9 175 aa6.94□□□□□ -1.3
CDH1-214ENST00000621016 WFDC13Q8IUB5 93 aa6.94□□□□□ -1.3
CDH1-214ENST00000621016 C7orf33Q8WU49 177 aa6.94□□□□□ -1.3
CDH1-214ENST00000621016 GVQW2A0A096LPI5 108 aaPredicted RBP6.93□□□□□ -1.3
CDH1-214ENST00000621016 SPAG11AQ6PDA7 123 aa6.93□□□□□ -1.3
CDH1-214ENST00000621016 KRTAP26-1Q6PEX3 210 aa6.93□□□□□ -1.3
CDH1-214ENST00000621016 LINC00528Q8N1L1 170 aa6.91□□□□□ -1.3
CDH1-214ENST00000621016 ETDCA0A1B0GVM5 59 aa6.9□□□□□ -1.3
CDH1-214ENST00000621016 LINC01554Q52M75 96 aa6.9□□□□□ -1.3
CDH1-214ENST00000621016 PDE6GP18545 87 aa6.89□□□□□ -1.31
CDH1-214ENST00000621016 SPINK7P58062 85 aa6.89□□□□□ -1.31
CDH1-214ENST00000621016 LINC01556Q5JQF7 62 aa6.89□□□□□ -1.31
CDH1-214ENST00000621016 LIMD2Q9BT23 127 aa6.89□□□□□ -1.31
CDH1-214ENST00000621016 Q8N377 158 aa6.87□□□□□ -1.31
CDH1-214ENST00000621016 ZNF706Q9Y5V0 76 aaPredicted RBP6.87□□□□□ -1.31
CDH1-214ENST00000621016 K7EQZ3 153 aa6.86□□□□□ -1.31
CDH1-214ENST00000621016 A0A096LNI7 61 aa6.86□□□□□ -1.31
CDH1-214ENST00000621016 CDC42SE1Q9NRR8 79 aa6.85□□□□□ -1.31
CDH1-214ENST00000621016 PRLHP81277 87 aa6.85□□□□□ -1.31
CDH1-214ENST00000621016 Q9BRP9 147 aa6.84□□□□□ -1.31
CDH1-214ENST00000621016 LYSTQ99698 3801 aa6.84□□□□□ -1.31
CDH1-214ENST00000621016 H3BNG1 76 aa6.84□□□□□ -1.31
CDH1-214ENST00000621016 ZCCHC13Q8WW36 166 aaKnown RBP6.84□□□□□ -1.31
CDH1-214ENST00000621016 C1orf137Q5JT78 98 aa6.83□□□□□ -1.32
CDH1-214ENST00000621016 CYP4F30PQ9H0H9 118 aa6.83□□□□□ -1.32
CDH1-214ENST00000621016 LOC101927531A0A1B0GV80 90 aa6.83□□□□□ -1.32
CDH1-214ENST00000621016 MP68P56378 58 aa6.82□□□□□ -1.32
CDH1-214ENST00000621016 PCOTHQ58A44 107 aa6.82□□□□□ -1.32
CDH1-214ENST00000621016 KCNQ1DNQ9H478 68 aa6.82□□□□□ -1.32
CDH1-214ENST00000621016 DNAH10OSP0CZ25 163 aa6.82□□□□□ -1.32
CDH1-214ENST00000621016 Q6ZRX8 168 aa6.82□□□□□ -1.32
CDH1-214ENST00000621016 CHTF8P0CG12 524 aa6.81□□□□□ -1.32
CDH1-214ENST00000621016 UBE2DNLQ8IWF7 75 aa6.81□□□□□ -1.32
CDH1-214ENST00000621016 Q75L30 129 aa6.81□□□□□ -1.32
CDH1-214ENST00000621016 COA5Q86WW8 74 aa6.8□□□□□ -1.32
CDH1-214ENST00000621016 KRTAP7-1Q8IUC3 87 aa6.8□□□□□ -1.32
CDH1-214ENST00000621016 RETNLBQ9BQ08 111 aa6.8□□□□□ -1.32
CDH1-214ENST00000621016 IGLV1-50A0A075B6I6 118 aa6.79□□□□□ -1.32
CDH1-214ENST00000621016 A0A1W2PNM2 257 aa6.79□□□□□ -1.32
CDH1-214ENST00000621016 H3BQ85 93 aa6.79□□□□□ -1.32
CDH1-214ENST00000621016 FLG2Q5D862 2391 aaPredicted RBP6.79□□□□□ -1.32
CDH1-214ENST00000621016 K7EIL1 84 aa6.78□□□□□ -1.32
CDH1-214ENST00000621016 RPL37AP61513 92 aaKnown RBP6.78□□□□□ -1.32
CDH1-214ENST00000621016 KRTAP1-5Q9BYS1 174 aa6.77□□□□□ -1.33
CDH1-214ENST00000621016 DHRS4-AS1Q9P1J3 65 aa6.77□□□□□ -1.33
CDH1-214ENST00000621016 CASC2Q6XLA1 102 aa6.77□□□□□ -1.33
CDH1-214ENST00000621016 DNAH10Q8IVF4 4471 aa6.76□□□□□ -1.33
CDH1-214ENST00000621016 LINC00476Q8WZB0 136 aa6.76□□□□□ -1.33
CDH1-214ENST00000621016 REG3GQ6UW15 175 aa6.76□□□□□ -1.33
CDH1-214ENST00000621016 NDUFB1O75438 58 aa6.76□□□□□ -1.33
CDH1-214ENST00000621016 DSCR10P59022 87 aa6.76□□□□□ -1.33
CDH1-214ENST00000621016 H0Y9P7 68 aa6.75□□□□□ -1.33
CDH1-214ENST00000621016 TGP01266 2768 aa6.74□□□□□ -1.33
CDH1-214ENST00000621016 A0A087WSZ3 146 aa6.73□□□□□ -1.33
CDH1-214ENST00000621016 CSAG1Q6PB30 78 aa6.73□□□□□ -1.33
CDH1-214ENST00000621016 IGLV5-48A0A075B6I7 105 aa6.72□□□□□ -1.33
CDH1-214ENST00000621016 LCE6AA0A183 80 aa6.71□□□□□ -1.33
CDH1-214ENST00000621016 Q8NBF4 154 aa6.71□□□□□ -1.33
CDH1-214ENST00000621016 KRTAP4-16G5E9R7 235 aaPredicted RBP6.71□□□□□ -1.34
CDH1-214ENST00000621016 TLX1NBP0CAT3 122 aa6.69□□□□□ -1.34
CDH1-214ENST00000621016 KRTAP11-1Q8IUC1 163 aa6.69□□□□□ -1.34
CDH1-214ENST00000621016 IGFL1Q6UW32 110 aa6.68□□□□□ -1.34
CDH1-214ENST00000621016 SPRR1AP35321 89 aa6.67□□□□□ -1.34
CDH1-214ENST00000621016 C1orf134Q5TEV5 83 aa6.66□□□□□ -1.34
CDH1-214ENST00000621016 CMYA5Q8N3K9 4069 aa6.66□□□□□ -1.34
CDH1-214ENST00000621016 HUWE1Q7Z6Z7 4374 aaKnown RBP6.65□□□□□ -1.35
CDH1-214ENST00000621016 TNP2Q05952 138 aa6.65□□□□□ -1.35
CDH1-214ENST00000621016 IGLV9-49A0A0B4J1Y8 123 aa6.64□□□□□ -1.35
CDH1-214ENST00000621016 PLA2G2DQ9UNK4 145 aa6.64□□□□□ -1.35
CDH1-214ENST00000621016 PANO1I0J062 215 aa6.63□□□□□ -1.35
CDH1-214ENST00000621016 Q6ZR54 194 aa6.63□□□□□ -1.35
CDH1-214ENST00000621016 H0Y9J4 135 aa6.63□□□□□ -1.35
CDH1-214ENST00000621016 IGLV5-37A0A075B6J1 123 aa6.62□□□□□ -1.35
CDH1-214ENST00000621016 ANAPC11Q9NYG5 84 aa6.61□□□□□ -1.35
CDH1-214ENST00000621016 LINC01558Q9Y6Z2 57 aa6.61□□□□□ -1.35
CDH1-214ENST00000621016 DNAH7Q8WXX0 4024 aa6.6□□□□□ -1.35
CDH1-214ENST00000621016 SPRR4Q96PI1 79 aa6.6□□□□□ -1.35
CDH1-214ENST00000621016 DNAH9Q9NYC9 4486 aa6.6□□□□□ -1.35
CDH1-214ENST00000621016 PLA2G1BP04054 148 aaKnown RBP6.58□□□□□ -1.36
CDH1-214ENST00000621016 SPANXA2-OT1Q8N9U9 137 aa6.58□□□□□ -1.36
CDH1-214ENST00000621016 APLNQ9ULZ1 77 aa6.57□□□□□ -1.36
CDH1-214ENST00000621016 IGLV8-61A0A075B6I0 122 aa6.56□□□□□ -1.36
CDH1-214ENST00000621016 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.55□□□□□ -1.36
CDH1-214ENST00000621016 CNBPP62633 177 aaKnown RBP6.55□□□□□ -1.36
CDH1-214ENST00000621016 HRES1P13985 223 aa6.55□□□□□ -1.36
CDH1-214ENST00000621016 C9orf163Q8N9P6 203 aa6.54□□□□□ -1.36
CDH1-214ENST00000621016 NBDYA0A0U1RRE5 68 aa6.54□□□□□ -1.36
CDH1-214ENST00000621016 A0A0A0MQY5 61 aa6.53□□□□□ -1.36
CDH1-214ENST00000621016 CRIPTQ9P021 101 aa6.53□□□□□ -1.36
CDH1-214ENST00000621016 FBN3Q75N90 2809 aa6.53□□□□□ -1.36
CDH1-214ENST00000621016 MEGF8Q7Z7M0 2845 aa6.52□□□□□ -1.37
CDH1-214ENST00000621016 IGLV7-46A0A075B6I9 117 aa6.52□□□□□ -1.37
CDH1-214ENST00000621016 C14orf177Q52M58 125 aa6.52□□□□□ -1.37
CDH1-214ENST00000621016 SPINK6Q6UWN8 80 aa6.51□□□□□ -1.37
CDH1-214ENST00000621016 DNAH3Q8TD57 4116 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms