RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 C1orf64Q8NEQ6 169 aa4.55□□□□□ -1.68
NEDD9-216ENST00000620854 SPINK1P00995 79 aa4.55□□□□□ -1.68
NEDD9-216ENST00000620854 ZNF706Q9Y5V0 76 aaPredicted RBP4.55□□□□□ -1.68
NEDD9-216ENST00000620854 FAM168BA1KXE4 195 aa4.55□□□□□ -1.68
NEDD9-216ENST00000620854 RPL37AP61513 92 aaKnown RBP4.55□□□□□ -1.68
NEDD9-216ENST00000620854 SERTAD4-AS1Q5TG53 156 aa4.55□□□□□ -1.68
NEDD9-216ENST00000620854 Q8N377 158 aa4.55□□□□□ -1.68
NEDD9-216ENST00000620854 OCR1Q9BZK8 76 aa4.55□□□□□ -1.68
NEDD9-216ENST00000620854 COL7A1Q02388 2944 aa4.54□□□□□ -1.68
NEDD9-216ENST00000620854 Q8NBF4 154 aa4.54□□□□□ -1.68
NEDD9-216ENST00000620854 LINC00476Q8WZB0 136 aa4.54□□□□□ -1.68
NEDD9-216ENST00000620854 CHTF8P0CG12 524 aa4.53□□□□□ -1.68
NEDD9-216ENST00000620854 Q6ZRX8 168 aa4.53□□□□□ -1.68
NEDD9-216ENST00000620854 C15orf56Q8N910 161 aa4.53□□□□□ -1.68
NEDD9-216ENST00000620854 TENM2Q9NT68 2774 aa4.53□□□□□ -1.68
NEDD9-216ENST00000620854 GVQW2A0A096LPI5 108 aaPredicted RBP4.52□□□□□ -1.69
NEDD9-216ENST00000620854 PHF5AQ7RTV0 110 aaKnown RBP4.52□□□□□ -1.69
NEDD9-216ENST00000620854 A0A1W2PNM2 257 aa4.52□□□□□ -1.69
NEDD9-216ENST00000620854 K7EQZ3 153 aa4.51□□□□□ -1.69
NEDD9-216ENST00000620854 hDV103S1A0JD37 113 aa4.51□□□□□ -1.69
NEDD9-216ENST00000620854 ERC2-IT1O76042 136 aa4.51□□□□□ -1.69
NEDD9-216ENST00000620854 C1orf134Q5TEV5 83 aa4.51□□□□□ -1.69
NEDD9-216ENST00000620854 LINC00588Q9Y4M8 146 aa4.51□□□□□ -1.69
NEDD9-216ENST00000620854 MOBPQ13875 183 aa4.5□□□□□ -1.69
NEDD9-216ENST00000620854 SPAG11AQ6PDA7 123 aa4.5□□□□□ -1.69
NEDD9-216ENST00000620854 KMT2BQ9UMN6 2715 aaPredicted RBP4.5□□□□□ -1.69
NEDD9-216ENST00000620854 IGLV5-52A0A0A0MRZ9 124 aa4.5□□□□□ -1.69
NEDD9-216ENST00000620854 F8WDY8 70 aa4.49□□□□□ -1.69
NEDD9-216ENST00000620854 IGKV2D-30A0A075B6S6 120 aa4.49□□□□□ -1.69
NEDD9-216ENST00000620854 IGKV2-30P06310 120 aa4.49□□□□□ -1.69
NEDD9-216ENST00000620854 CASC10Q5T4H9 136 aa4.49□□□□□ -1.69
NEDD9-216ENST00000620854 WWC2-AS2Q96NR7 200 aa4.48□□□□□ -1.69
NEDD9-216ENST00000620854 STAB2Q8WWQ8 2551 aa4.48□□□□□ -1.69
NEDD9-216ENST00000620854 K7ERS5 55 aa4.47□□□□□ -1.69
NEDD9-216ENST00000620854 KRTAP26-1Q6PEX3 210 aa4.47□□□□□ -1.69
NEDD9-216ENST00000620854 ANK2Q01484 3957 aa4.47□□□□□ -1.69
NEDD9-216ENST00000620854 A8MUN3 132 aa4.47□□□□□ -1.69
NEDD9-216ENST00000620854 DNAH10OSP0CZ25 163 aa4.47□□□□□ -1.69
NEDD9-216ENST00000620854 KCNQ1DNQ9H478 68 aa4.47□□□□□ -1.69
NEDD9-216ENST00000620854 DSCR10P59022 87 aa4.47□□□□□ -1.69
NEDD9-216ENST00000620854 IGLV5-48A0A075B6I7 105 aa4.46□□□□□ -1.7
NEDD9-216ENST00000620854 NBDYA0A0U1RRE5 68 aa4.46□□□□□ -1.7
NEDD9-216ENST00000620854 TRAV22A0A0B4J277 110 aa4.46□□□□□ -1.7
NEDD9-216ENST00000620854 A8MU10 97 aa4.46□□□□□ -1.7
NEDD9-216ENST00000620854 LIMD2Q9BT23 127 aa4.45□□□□□ -1.7
NEDD9-216ENST00000620854 SPACA4Q8TDM5 124 aa4.45□□□□□ -1.7
NEDD9-216ENST00000620854 IGLV8-61A0A075B6I0 122 aa4.44□□□□□ -1.7
NEDD9-216ENST00000620854 IGLV1-50A0A075B6I6 118 aa4.43□□□□□ -1.7
NEDD9-216ENST00000620854 C16orf90A8MZG2 172 aa4.43□□□□□ -1.7
NEDD9-216ENST00000620854 IGFL1Q6UW32 110 aa4.43□□□□□ -1.7
NEDD9-216ENST00000620854 A0A1B0GW54 56 aa4.42□□□□□ -1.7
NEDD9-216ENST00000620854 KRTAP7-1Q8IUC3 87 aa4.42□□□□□ -1.7
NEDD9-216ENST00000620854 FLG2Q5D862 2391 aaPredicted RBP4.41□□□□□ -1.7
NEDD9-216ENST00000620854 A0A1B0GU69 56 aa4.41□□□□□ -1.7
NEDD9-216ENST00000620854 TP53AIP1Q9HCN2 124 aa4.4□□□□□ -1.7
NEDD9-216ENST00000620854 ANAPC11Q9NYG5 84 aa4.4□□□□□ -1.7
NEDD9-216ENST00000620854 TNP2Q05952 138 aa4.4□□□□□ -1.71
NEDD9-216ENST00000620854 KRTAP4-16G5E9R7 235 aaPredicted RBP4.4□□□□□ -1.71
NEDD9-216ENST00000620854 A8MWP4 228 aa4.39□□□□□ -1.71
NEDD9-216ENST00000620854 SPRR4Q96PI1 79 aa4.39□□□□□ -1.71
NEDD9-216ENST00000620854 APLNQ9ULZ1 77 aa4.39□□□□□ -1.71
NEDD9-216ENST00000620854 COA5Q86WW8 74 aa4.39□□□□□ -1.71
NEDD9-216ENST00000620854 C7orf65Q6ZTY9 151 aa4.38□□□□□ -1.71
NEDD9-216ENST00000620854 DMBT1Q9UGM3 2413 aaPredicted RBP4.38□□□□□ -1.71
NEDD9-216ENST00000620854 ZCCHC13Q8WW36 166 aaKnown RBP4.38□□□□□ -1.71
NEDD9-216ENST00000620854 ATP11AUNQ6ZP68 121 aa4.38□□□□□ -1.71
NEDD9-216ENST00000620854 RTL8CO15255 209 aa4.37□□□□□ -1.71
NEDD9-216ENST00000620854 ACYP2P14621 99 aa4.37□□□□□ -1.71
NEDD9-216ENST00000620854 Q1T7F1 81 aa4.37□□□□□ -1.71
NEDD9-216ENST00000620854 PRR15Q8IV56 129 aa4.37□□□□□ -1.71
NEDD9-216ENST00000620854 LYSTQ99698 3801 aa4.37□□□□□ -1.71
NEDD9-216ENST00000620854 H3BPC8 53 aa4.36□□□□□ -1.71
NEDD9-216ENST00000620854 SPRR1AP35321 89 aa4.36□□□□□ -1.71
NEDD9-216ENST00000620854 DNAH10Q8IVF4 4471 aa4.36□□□□□ -1.71
NEDD9-216ENST00000620854 LINC00313P59037 77 aa4.35□□□□□ -1.71
NEDD9-216ENST00000620854 MRPL34Q9BQ48 92 aaKnown RBP4.35□□□□□ -1.71
NEDD9-216ENST00000620854 LCE6AA0A183 80 aa4.35□□□□□ -1.71
NEDD9-216ENST00000620854 TLX1NBP0CAT3 122 aa4.33□□□□□ -1.72
NEDD9-216ENST00000620854 Q5VV11 94 aa4.33□□□□□ -1.72
NEDD9-216ENST00000620854 C8orf17Q9NRJ1 99 aa4.33□□□□□ -1.72
NEDD9-216ENST00000620854 KRTAP11-1Q8IUC1 163 aa4.33□□□□□ -1.72
NEDD9-216ENST00000620854 A0A087WTM6 91 aa4.32□□□□□ -1.72
NEDD9-216ENST00000620854 CYP4F30PQ9H0H9 118 aa4.32□□□□□ -1.72
NEDD9-216ENST00000620854 CNBPP62633 177 aaKnown RBP4.32□□□□□ -1.72
NEDD9-216ENST00000620854 Q8N9P0 234 aaPredicted RBP4.32□□□□□ -1.72
NEDD9-216ENST00000620854 PLA2G2DQ9UNK4 145 aa4.32□□□□□ -1.72
NEDD9-216ENST00000620854 LOC101927531A0A1B0GV80 90 aa4.31□□□□□ -1.72
NEDD9-216ENST00000620854 C9orf163Q8N9P6 203 aa4.31□□□□□ -1.72
NEDD9-216ENST00000620854 Q96NJ1 140 aa4.31□□□□□ -1.72
NEDD9-216ENST00000620854 TYMSOSQ8TAI1 123 aa4.31□□□□□ -1.72
NEDD9-216ENST00000620854 IGLV5-37A0A075B6J1 123 aa4.3□□□□□ -1.72
NEDD9-216ENST00000620854 A0A1B0GVX0 72 aa4.3□□□□□ -1.72
NEDD9-216ENST00000620854 KRTAP29-1A8MX34 341 aaPredicted RBP4.29□□□□□ -1.72
NEDD9-216ENST00000620854 PRR26Q8N8Z3 221 aa4.29□□□□□ -1.72
NEDD9-216ENST00000620854 FAM229AH3BQW9 127 aa4.29□□□□□ -1.72
NEDD9-216ENST00000620854 KRTAP1-5Q9BYS1 174 aa4.29□□□□□ -1.72
NEDD9-216ENST00000620854 ZNF861PO60384 105 aa4.28□□□□□ -1.72
NEDD9-216ENST00000620854 PLA2G1BP04054 148 aaKnown RBP4.28□□□□□ -1.72
NEDD9-216ENST00000620854 PSORS1C2Q9UIG4 136 aa4.28□□□□□ -1.72
NEDD9-216ENST00000620854 C8orf87E5RJ46 101 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms