RNA–Protein interactions for RNA: ENST00000613524.4

SYCP1-209, Transcript of synaptonemal complex protein 1, humanhuman

TSL 1 (best) BASIC

Gene SYCP1, Length 3,034 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-209ENST00000613524 SMIM11BQ8TCY0 68 aa3.16□□□□□ -1.9
SYCP1-209ENST00000613524 IGHV3OR16-9A0A0B4J2B5 98 aa3.16□□□□□ -1.9
SYCP1-209ENST00000613524 Q8NBF4 154 aa3.16□□□□□ -1.9
SYCP1-209ENST00000613524 SND1-IT1Q9HBX3 110 aa3.16□□□□□ -1.9
SYCP1-209ENST00000613524 CXCL5P42830 114 aa3.15□□□□□ -1.9
SYCP1-209ENST00000613524 C14orf177Q52M58 125 aa3.15□□□□□ -1.9
SYCP1-209ENST00000613524 KRTAP26-1Q6PEX3 210 aa3.15□□□□□ -1.9
SYCP1-209ENST00000613524 FAM19A1Q7Z5A9 133 aa3.15□□□□□ -1.91
SYCP1-209ENST00000613524 C3orf22Q8N5N4 141 aa3.15□□□□□ -1.91
SYCP1-209ENST00000613524 INAFM2P0DMQ5 153 aa3.14□□□□□ -1.91
SYCP1-209ENST00000613524 TMEM126AQ9H061 195 aa3.14□□□□□ -1.91
SYCP1-209ENST00000613524 PHF5AQ7RTV0 110 aaKnown RBP3.14□□□□□ -1.91
SYCP1-209ENST00000613524 DNAH8Q96JB1 4490 aa3.14□□□□□ -1.91
SYCP1-209ENST00000613524 UQCRQO14949 82 aa3.14□□□□□ -1.91
SYCP1-209ENST00000613524 LINC00158P58513 81 aa3.14□□□□□ -1.91
SYCP1-209ENST00000613524 UBE2BP63146 152 aa3.14□□□□□ -1.91
SYCP1-209ENST00000613524 NOTCH2NLQ7Z3S9 236 aa3.14□□□□□ -1.91
SYCP1-209ENST00000613524 C9orf163Q8N9P6 203 aa3.14□□□□□ -1.91
SYCP1-209ENST00000613524 C14orf132Q9NPU4 83 aa3.14□□□□□ -1.91
SYCP1-209ENST00000613524 H0YGX0 51 aa3.13□□□□□ -1.91
SYCP1-209ENST00000613524 LINC00846Q9NV44 126 aa3.13□□□□□ -1.91
SYCP1-209ENST00000613524 FAT3Q8TDW7 4589 aa3.13□□□□□ -1.91
SYCP1-209ENST00000613524 CYSTM1Q9H1C7 97 aa3.13□□□□□ -1.91
SYCP1-209ENST00000613524 A0A1W2PNN7 141 aa3.12□□□□□ -1.91
SYCP1-209ENST00000613524 NCR3O14931 201 aa3.12□□□□□ -1.91
SYCP1-209ENST00000613524 COX7CP15954 63 aa3.12□□□□□ -1.91
SYCP1-209ENST00000613524 CXCL6P80162 114 aa3.12□□□□□ -1.91
SYCP1-209ENST00000613524 C9orf153Q5TBE3 101 aa3.12□□□□□ -1.91
SYCP1-209ENST00000613524 LINC00167Q96N53 147 aa3.12□□□□□ -1.91
SYCP1-209ENST00000613524 C6orf48Q9UBA6 75 aa3.12□□□□□ -1.91
SYCP1-209ENST00000613524 RPL37AP61513 92 aaKnown RBP3.12□□□□□ -1.91
SYCP1-209ENST00000613524 Q6JHZ5 121 aa3.12□□□□□ -1.91
SYCP1-209ENST00000613524 DNAL4O96015 105 aa3.11□□□□□ -1.91
SYCP1-209ENST00000613524 CRYGAP11844 174 aa3.11□□□□□ -1.91
SYCP1-209ENST00000613524 IGKV3D-7A0A0C4DH55 119 aa3.11□□□□□ -1.91
SYCP1-209ENST00000613524 PRR3P79522 188 aaKnown RBP3.11□□□□□ -1.91
SYCP1-209ENST00000613524 OCR1Q9BZK8 76 aa3.11□□□□□ -1.91
SYCP1-209ENST00000613524 HMCN1Q96RW7 5635 aa3.11□□□□□ -1.91
SYCP1-209ENST00000613524 A0A087WVE0 104 aa3.11□□□□□ -1.91
SYCP1-209ENST00000613524 SMIM26A0A096LP01 95 aa3.11□□□□□ -1.91
SYCP1-209ENST00000613524 GVQW2A0A096LPI5 108 aaPredicted RBP3.11□□□□□ -1.91
SYCP1-209ENST00000613524 C1orf137Q5JT78 98 aa3.11□□□□□ -1.91
SYCP1-209ENST00000613524 Q8NDZ9 215 aa3.11□□□□□ -1.91
SYCP1-209ENST00000613524 ATOX1O00244 68 aa3.1□□□□□ -1.91
SYCP1-209ENST00000613524 CCKP06307 115 aa3.1□□□□□ -1.91
SYCP1-209ENST00000613524 KIAA0087Q14695 138 aa3.1□□□□□ -1.91
SYCP1-209ENST00000613524 C4orf26Q17RF5 130 aa3.1□□□□□ -1.91
SYCP1-209ENST00000613524 Q8IZM0 81 aa3.1□□□□□ -1.91
SYCP1-209ENST00000613524 OR13C6PQ8NH95 151 aa3.1□□□□□ -1.91
SYCP1-209ENST00000613524 C7orf33Q8WU49 177 aa3.1□□□□□ -1.91
SYCP1-209ENST00000613524 LOC107984640A0A0U1RRK4 108 aa3.1□□□□□ -1.91
SYCP1-209ENST00000613524 ORMDL1Q9P0S3 153 aa3.1□□□□□ -1.91
SYCP1-209ENST00000613524 hADV29S1A0JD25 119 aa3.09□□□□□ -1.91
SYCP1-209ENST00000613524 A0A1B0GX51 115 aa3.09□□□□□ -1.91
SYCP1-209ENST00000613524 KRTAP9-7A8MTY7 169 aa3.09□□□□□ -1.91
SYCP1-209ENST00000613524 NDUFC2O95298 119 aa3.09□□□□□ -1.92
SYCP1-209ENST00000613524 CNBPP62633 177 aaKnown RBP3.09□□□□□ -1.92
SYCP1-209ENST00000613524 SPACA4Q8TDM5 124 aa3.09□□□□□ -1.92
SYCP1-209ENST00000613524 ANAPC11Q9NYG5 84 aa3.09□□□□□ -1.92
SYCP1-209ENST00000613524 KRTAP11-1Q8IUC1 163 aa3.08□□□□□ -1.92
SYCP1-209ENST00000613524 SERP2Q8N6R1 65 aa3.08□□□□□ -1.92
SYCP1-209ENST00000613524 NKAPP1Q8N9T2 125 aa3.08□□□□□ -1.92
SYCP1-209ENST00000613524 COX17Q14061 63 aa3.07□□□□□ -1.92
SYCP1-209ENST00000613524 PSORS1C2Q9UIG4 136 aa3.07□□□□□ -1.92
SYCP1-209ENST00000613524 JMJD7-PLA2G4BH0Y9G9 81 aa3.07□□□□□ -1.92
SYCP1-209ENST00000613524 TMEM256-PLSCR3K7ERE1 68 aa3.07□□□□□ -1.92
SYCP1-209ENST00000613524 RPS28P62857 69 aaKnown RBP3.07□□□□□ -1.92
SYCP1-209ENST00000613524 NDUFC2-KCTD14E9PQ53 114 aa3.06□□□□□ -1.92
SYCP1-209ENST00000613524 J3KT08 172 aa3.06□□□□□ -1.92
SYCP1-209ENST00000613524 C6orf99Q4VX62 202 aa3.06□□□□□ -1.92
SYCP1-209ENST00000613524 LINC00575Q6W349 94 aa3.06□□□□□ -1.92
SYCP1-209ENST00000613524 PRLHP81277 87 aa3.06□□□□□ -1.92
SYCP1-209ENST00000613524 Q6ZSA8 131 aa3.06□□□□□ -1.92
SYCP1-209ENST00000613524 Q6ZQT0 140 aa3.06□□□□□ -1.92
SYCP1-209ENST00000613524 HIGD2AQ9BW72 106 aa3.06□□□□□ -1.92
SYCP1-209ENST00000613524 TMEM258P61165 79 aa3.05□□□□□ -1.92
SYCP1-209ENST00000613524 ATP5EP2Q5VTU8 51 aa3.05□□□□□ -1.92
SYCP1-209ENST00000613524 LOC110117498A0A087WWA1 95 aa3.05□□□□□ -1.92
SYCP1-209ENST00000613524 IGLV6-57P01721 117 aa3.05□□□□□ -1.92
SYCP1-209ENST00000613524 TRAV23DV6A0A075B6W5 121 aa3.04□□□□□ -1.92
SYCP1-209ENST00000613524 TRBV10-3A0A0K0K1G6 114 aa3.04□□□□□ -1.92
SYCP1-209ENST00000613524 IGKV2-30P06310 120 aa3.04□□□□□ -1.92
SYCP1-209ENST00000613524 S100A7L2Q5SY68 101 aa3.04□□□□□ -1.92
SYCP1-209ENST00000613524 UBE2AP49459 152 aa3.04□□□□□ -1.92
SYCP1-209ENST00000613524 KRTAP7-1Q8IUC3 87 aa3.04□□□□□ -1.92
SYCP1-209ENST00000613524 LINC00474Q9P2X8 69 aa3.04□□□□□ -1.92
SYCP1-209ENST00000613524 UBR4Q5T4S7 5183 aa3.04□□□□□ -1.92
SYCP1-209ENST00000613524 KRTAP29-1A8MX34 341 aaPredicted RBP3.03□□□□□ -1.92
SYCP1-209ENST00000613524 DSCR8Q96T75 97 aa3.03□□□□□ -1.92
SYCP1-209ENST00000613524 PLAC8Q9NZF1 115 aa3.03□□□□□ -1.92
SYCP1-209ENST00000613524 RBM3P98179 157 aaKnown RBP3.03□□□□□ -1.92
SYCP1-209ENST00000613524 UBL5Q9BZL1 73 aa3.03□□□□□ -1.92
SYCP1-209ENST00000613524 LRP2P98164 4655 aa3.02□□□□□ -1.93
SYCP1-209ENST00000613524 Q5XG85 94 aa3.02□□□□□ -1.93
SYCP1-209ENST00000613524 Q6ZQY7 126 aa3.02□□□□□ -1.93
SYCP1-209ENST00000613524 BCE1O60756 84 aa3.01□□□□□ -1.93
SYCP1-209ENST00000613524 RNF213Q63HN8 5207 aa3.01□□□□□ -1.93
SYCP1-209ENST00000613524 TRBV7-4A0A0J9YYF1 115 aa3.01□□□□□ -1.93
SYCP1-209ENST00000613524 C20orf197Q8N268 126 aa3.01□□□□□ -1.93
SYCP1-209ENST00000613524 RBM12B-AS1Q9P1G2 102 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms