RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 C1orf64Q8NEQ6 169 aa4.64□□□□□ -1.67
CSDE1-218ENST00000610726 KRTAP1-5Q9BYS1 174 aa4.64□□□□□ -1.67
CSDE1-218ENST00000610726 IGKV2D-30A0A075B6S6 120 aa4.64□□□□□ -1.67
CSDE1-218ENST00000610726 K7EQZ3 153 aa4.64□□□□□ -1.67
CSDE1-218ENST00000610726 IGKV2-30P06310 120 aa4.64□□□□□ -1.67
CSDE1-218ENST00000610726 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.63□□□□□ -1.67
CSDE1-218ENST00000610726 CELSR1Q9NYQ6 3014 aa4.62□□□□□ -1.67
CSDE1-218ENST00000610726 SPTSSBQ8NFR3 76 aa4.62□□□□□ -1.67
CSDE1-218ENST00000610726 A0A1W2PNM2 257 aa4.61□□□□□ -1.67
CSDE1-218ENST00000610726 SPINK1P00995 79 aa4.61□□□□□ -1.67
CSDE1-218ENST00000610726 IGLV7-43P04211 117 aa4.61□□□□□ -1.67
CSDE1-218ENST00000610726 IGLV5-37A0A075B6J1 123 aa4.6□□□□□ -1.67
CSDE1-218ENST00000610726 LINC00313P59037 77 aa4.6□□□□□ -1.67
CSDE1-218ENST00000610726 SMIM26A0A096LP01 95 aa4.6□□□□□ -1.67
CSDE1-218ENST00000610726 SERP1Q9Y6X1 66 aa4.6□□□□□ -1.67
CSDE1-218ENST00000610726 A8MWP4 228 aa4.59□□□□□ -1.67
CSDE1-218ENST00000610726 SPRR4Q96PI1 79 aa4.59□□□□□ -1.67
CSDE1-218ENST00000610726 KRTAP26-1Q6PEX3 210 aa4.59□□□□□ -1.68
CSDE1-218ENST00000610726 TRAV22A0A0B4J277 110 aa4.58□□□□□ -1.68
CSDE1-218ENST00000610726 SSBP3-AS1Q7Z2R9 100 aa4.58□□□□□ -1.68
CSDE1-218ENST00000610726 TP53AIP1Q9HCN2 124 aa4.58□□□□□ -1.68
CSDE1-218ENST00000610726 V9GYY9 64 aa4.58□□□□□ -1.68
CSDE1-218ENST00000610726 TENM1Q9UKZ4 2725 aa4.57□□□□□ -1.68
CSDE1-218ENST00000610726 A6NED7 52 aa4.57□□□□□ -1.68
CSDE1-218ENST00000610726 LINC00336Q6ZUF6 198 aa4.57□□□□□ -1.68
CSDE1-218ENST00000610726 DMBT1Q9UGM3 2413 aaPredicted RBP4.57□□□□□ -1.68
CSDE1-218ENST00000610726 OTOGQ6ZRI0 2925 aa4.57□□□□□ -1.68
CSDE1-218ENST00000610726 IGLV5-48A0A075B6I7 105 aa4.57□□□□□ -1.68
CSDE1-218ENST00000610726 Q96NJ1 140 aa4.57□□□□□ -1.68
CSDE1-218ENST00000610726 PRR15Q8IV56 129 aa4.56□□□□□ -1.68
CSDE1-218ENST00000610726 FBN1P35555 2871 aaKnown RBP4.56□□□□□ -1.68
CSDE1-218ENST00000610726 A0A0U1RQV1 116 aa4.56□□□□□ -1.68
CSDE1-218ENST00000610726 CSMD1Q96PZ7 3565 aa4.56□□□□□ -1.68
CSDE1-218ENST00000610726 OBSCN-AS1Q96MR7 158 aa4.56□□□□□ -1.68
CSDE1-218ENST00000610726 ZFHX3Q15911 3703 aa4.55□□□□□ -1.68
CSDE1-218ENST00000610726 PSPHP1O15172 72 aa4.55□□□□□ -1.68
CSDE1-218ENST00000610726 LINC00304Q8N9R0 145 aa4.55□□□□□ -1.68
CSDE1-218ENST00000610726 SVEP1Q4LDE5 3571 aa4.55□□□□□ -1.68
CSDE1-218ENST00000610726 DSCR10P59022 87 aa4.55□□□□□ -1.68
CSDE1-218ENST00000610726 MRPL34Q9BQ48 92 aaKnown RBP4.55□□□□□ -1.68
CSDE1-218ENST00000610726 PRR15LQ9BU68 103 aa4.55□□□□□ -1.68
CSDE1-218ENST00000610726 NBPF19A0A087WUL8 3843 aa4.54□□□□□ -1.68
CSDE1-218ENST00000610726 TENM3Q9P273 2699 aa4.54□□□□□ -1.68
CSDE1-218ENST00000610726 C8orf17Q9NRJ1 99 aa4.54□□□□□ -1.68
CSDE1-218ENST00000610726 PKD1L1Q8TDX9 2849 aa4.54□□□□□ -1.68
CSDE1-218ENST00000610726 PDZD2O15018 2839 aa4.52□□□□□ -1.69
CSDE1-218ENST00000610726 A0A1B0GVX0 72 aa4.52□□□□□ -1.69
CSDE1-218ENST00000610726 SPRR1AP35321 89 aa4.52□□□□□ -1.69
CSDE1-218ENST00000610726 LINC01600Q96MT4 127 aa4.52□□□□□ -1.69
CSDE1-218ENST00000610726 CUBNO60494 3623 aa4.52□□□□□ -1.69
CSDE1-218ENST00000610726 C7orf65Q6ZTY9 151 aa4.51□□□□□ -1.69
CSDE1-218ENST00000610726 VWFP04275 2813 aa4.51□□□□□ -1.69
CSDE1-218ENST00000610726 C9orf92A6NGG3 77 aa4.51□□□□□ -1.69
CSDE1-218ENST00000610726 C8orf87E5RJ46 101 aa4.51□□□□□ -1.69
CSDE1-218ENST00000610726 H3BPC8 53 aa4.5□□□□□ -1.69
CSDE1-218ENST00000610726 PLAC8Q9NZF1 115 aa4.5□□□□□ -1.69
CSDE1-218ENST00000610726 J3QL48 77 aa4.49□□□□□ -1.69
CSDE1-218ENST00000610726 SPENQ96T58 3664 aaKnown RBP4.49□□□□□ -1.69
CSDE1-218ENST00000610726 PANO1I0J062 215 aa4.49□□□□□ -1.69
CSDE1-218ENST00000610726 SPAG11AQ6PDA7 123 aa4.49□□□□□ -1.69
CSDE1-218ENST00000610726 KRTAP10-2P60368 255 aa4.49□□□□□ -1.69
CSDE1-218ENST00000610726 CSMD2Q7Z408 3487 aa4.48□□□□□ -1.69
CSDE1-218ENST00000610726 PRR26Q8N8Z3 221 aa4.48□□□□□ -1.69
CSDE1-218ENST00000610726 K7ERS5 55 aa4.48□□□□□ -1.69
CSDE1-218ENST00000610726 SVIPQ8NHG7 77 aa4.48□□□□□ -1.69
CSDE1-218ENST00000610726 ACYP2P14621 99 aa4.48□□□□□ -1.69
CSDE1-218ENST00000610726 ATP11AUNQ6ZP68 121 aa4.48□□□□□ -1.69
CSDE1-218ENST00000610726 LOC101927531A0A1B0GV80 90 aa4.47□□□□□ -1.69
CSDE1-218ENST00000610726 KLKP1Q107X0 134 aa4.46□□□□□ -1.69
CSDE1-218ENST00000610726 KRTAP10-1P60331 282 aa4.46□□□□□ -1.7
CSDE1-218ENST00000610726 FLG2Q5D862 2391 aaPredicted RBP4.46□□□□□ -1.7
CSDE1-218ENST00000610726 Q6ZR54 194 aa4.45□□□□□ -1.7
CSDE1-218ENST00000610726 H7BZZ5 65 aa4.44□□□□□ -1.7
CSDE1-218ENST00000610726 RPS28P62857 69 aaKnown RBP4.43□□□□□ -1.7
CSDE1-218ENST00000610726 LCE6AA0A183 80 aa4.43□□□□□ -1.7
CSDE1-218ENST00000610726 C4orf26Q17RF5 130 aa4.43□□□□□ -1.7
CSDE1-218ENST00000610726 A0A1B0GU69 56 aa4.42□□□□□ -1.7
CSDE1-218ENST00000610726 SPRR1BP22528 89 aa4.42□□□□□ -1.7
CSDE1-218ENST00000610726 TENM2Q9NT68 2774 aa4.42□□□□□ -1.7
CSDE1-218ENST00000610726 IGLV8-61A0A075B6I0 122 aa4.41□□□□□ -1.7
CSDE1-218ENST00000610726 KRTAP4-16G5E9R7 235 aaPredicted RBP4.41□□□□□ -1.7
CSDE1-218ENST00000610726 OCR1Q9BZK8 76 aa4.41□□□□□ -1.7
CSDE1-218ENST00000610726 PMAIP1Q13794 54 aa4.41□□□□□ -1.7
CSDE1-218ENST00000610726 COA5Q86WW8 74 aa4.4□□□□□ -1.7
CSDE1-218ENST00000610726 Q6ZRN7 208 aaPredicted RBP4.4□□□□□ -1.7
CSDE1-218ENST00000610726 CD164Q04900 197 aa4.4□□□□□ -1.71
CSDE1-218ENST00000610726 TGP01266 2768 aa4.4□□□□□ -1.71
CSDE1-218ENST00000610726 FAM229BQ4G0N7 80 aa4.39□□□□□ -1.71
CSDE1-218ENST00000610726 KRTAP11-1Q8IUC1 163 aa4.39□□□□□ -1.71
CSDE1-218ENST00000610726 KRTAP7-1Q8IUC3 87 aa4.38□□□□□ -1.71
CSDE1-218ENST00000610726 LINC00472Q9H8W2 130 aa4.37□□□□□ -1.71
CSDE1-218ENST00000610726 BSNQ9UPA5 3926 aa4.37□□□□□ -1.71
CSDE1-218ENST00000610726 A8MUN3 132 aa4.37□□□□□ -1.71
CSDE1-218ENST00000610726 MMP24-AS1A0A0U1RRL7 71 aa4.36□□□□□ -1.71
CSDE1-218ENST00000610726 Q8N1X5 172 aa4.36□□□□□ -1.71
CSDE1-218ENST00000610726 C1orf195Q5TG92 126 aa4.36□□□□□ -1.71
CSDE1-218ENST00000610726 IGLV7-46A0A075B6I9 117 aa4.34□□□□□ -1.71
CSDE1-218ENST00000610726 Q5VSD8 79 aa4.33□□□□□ -1.72
CSDE1-218ENST00000610726 COX6B2Q6YFQ2 88 aa4.33□□□□□ -1.72
CSDE1-218ENST00000610726 A0A087X002 238 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms