RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 IGHV6-1A0A0B4J1U7 121 aa4.42□□□□□ -1.7
SYNPO2-206ENST00000610556 OTOGQ6ZRI0 2925 aa4.42□□□□□ -1.7
SYNPO2-206ENST00000610556 IGFL1Q6UW32 110 aa4.42□□□□□ -1.7
SYNPO2-206ENST00000610556 CHKB-CPT1BH3BT56 60 aa4.42□□□□□ -1.7
SYNPO2-206ENST00000610556 C16orf90A8MZG2 172 aa4.41□□□□□ -1.7
SYNPO2-206ENST00000610556 TENM1Q9UKZ4 2725 aa4.41□□□□□ -1.7
SYNPO2-206ENST00000610556 Q5XG85 94 aa4.41□□□□□ -1.7
SYNPO2-206ENST00000610556 C1orf195Q5TG92 126 aa4.41□□□□□ -1.7
SYNPO2-206ENST00000610556 C1orf64Q8NEQ6 169 aa4.41□□□□□ -1.7
SYNPO2-206ENST00000610556 IGLV5-48A0A075B6I7 105 aa4.4□□□□□ -1.7
SYNPO2-206ENST00000610556 K7EIL1 84 aa4.4□□□□□ -1.7
SYNPO2-206ENST00000610556 KRTAP26-1Q6PEX3 210 aa4.4□□□□□ -1.7
SYNPO2-206ENST00000610556 STAB2Q8WWQ8 2551 aa4.4□□□□□ -1.71
SYNPO2-206ENST00000610556 A0A1B0GW54 56 aa4.4□□□□□ -1.71
SYNPO2-206ENST00000610556 OCR1Q9BZK8 76 aa4.4□□□□□ -1.71
SYNPO2-206ENST00000610556 TLX1NBP0CAT3 122 aa4.39□□□□□ -1.71
SYNPO2-206ENST00000610556 PRR15LQ9BU68 103 aa4.39□□□□□ -1.71
SYNPO2-206ENST00000610556 A6NED7 52 aa4.39□□□□□ -1.71
SYNPO2-206ENST00000610556 CIRBP-AS1Q8TBR5 109 aa4.39□□□□□ -1.71
SYNPO2-206ENST00000610556 C4orf48Q5BLP8 95 aa4.38□□□□□ -1.71
SYNPO2-206ENST00000610556 MDFIQ99750 246 aa4.38□□□□□ -1.71
SYNPO2-206ENST00000610556 TENM3Q9P273 2699 aa4.37□□□□□ -1.71
SYNPO2-206ENST00000610556 DSCR10P59022 87 aa4.37□□□□□ -1.71
SYNPO2-206ENST00000610556 MOBPQ13875 183 aa4.37□□□□□ -1.71
SYNPO2-206ENST00000610556 PLA2G2DQ9UNK4 145 aa4.37□□□□□ -1.71
SYNPO2-206ENST00000610556 hDV103S1A0JD37 113 aa4.37□□□□□ -1.71
SYNPO2-206ENST00000610556 LY6G6CO95867 125 aa4.37□□□□□ -1.71
SYNPO2-206ENST00000610556 RETNLBQ9BQ08 111 aa4.37□□□□□ -1.71
SYNPO2-206ENST00000610556 ZNF706Q9Y5V0 76 aaPredicted RBP4.36□□□□□ -1.71
SYNPO2-206ENST00000610556 NUPR2A6NF83 97 aa4.35□□□□□ -1.71
SYNPO2-206ENST00000610556 PMAIP1Q13794 54 aa4.35□□□□□ -1.71
SYNPO2-206ENST00000610556 FAM229BQ4G0N7 80 aa4.35□□□□□ -1.71
SYNPO2-206ENST00000610556 FP248Q71RG6 208 aaPredicted RBP4.35□□□□□ -1.71
SYNPO2-206ENST00000610556 NBDYA0A0U1RRE5 68 aa4.35□□□□□ -1.71
SYNPO2-206ENST00000610556 ANAPC11Q9NYG5 84 aa4.35□□□□□ -1.71
SYNPO2-206ENST00000610556 A8MUN3 132 aa4.34□□□□□ -1.71
SYNPO2-206ENST00000610556 TRAV22A0A0B4J277 110 aa4.34□□□□□ -1.71
SYNPO2-206ENST00000610556 FBN1P35555 2871 aaKnown RBP4.34□□□□□ -1.71
SYNPO2-206ENST00000610556 IGLV5-52A0A0A0MRZ9 124 aa4.34□□□□□ -1.72
SYNPO2-206ENST00000610556 A8MWP4 228 aa4.34□□□□□ -1.72
SYNPO2-206ENST00000610556 PRR15Q8IV56 129 aa4.34□□□□□ -1.72
SYNPO2-206ENST00000610556 IGLV5-37A0A075B6J1 123 aa4.33□□□□□ -1.72
SYNPO2-206ENST00000610556 SPRR4Q96PI1 79 aa4.33□□□□□ -1.72
SYNPO2-206ENST00000610556 SPRR1AP35321 89 aa4.33□□□□□ -1.72
SYNPO2-206ENST00000610556 SPAG11AQ6PDA7 123 aa4.32□□□□□ -1.72
SYNPO2-206ENST00000610556 C9orf163Q8N9P6 203 aa4.32□□□□□ -1.72
SYNPO2-206ENST00000610556 KRTAP1-5Q9BYS1 174 aa4.32□□□□□ -1.72
SYNPO2-206ENST00000610556 PKD1L1Q8TDX9 2849 aa4.31□□□□□ -1.72
SYNPO2-206ENST00000610556 RTL8CO15255 209 aa4.29□□□□□ -1.72
SYNPO2-206ENST00000610556 CNBPP62633 177 aaKnown RBP4.29□□□□□ -1.72
SYNPO2-206ENST00000610556 TRRAPQ9Y4A5 3859 aa4.29□□□□□ -1.72
SYNPO2-206ENST00000610556 KRTAP4-16G5E9R7 235 aaPredicted RBP4.29□□□□□ -1.72
SYNPO2-206ENST00000610556 C1orf134Q5TEV5 83 aa4.29□□□□□ -1.72
SYNPO2-206ENST00000610556 TNP2Q05952 138 aa4.28□□□□□ -1.72
SYNPO2-206ENST00000610556 LIMD2Q9BT23 127 aa4.28□□□□□ -1.72
SYNPO2-206ENST00000610556 APLNQ9ULZ1 77 aa4.28□□□□□ -1.72
SYNPO2-206ENST00000610556 H3BPC8 53 aa4.27□□□□□ -1.73
SYNPO2-206ENST00000610556 COA5Q86WW8 74 aa4.27□□□□□ -1.73
SYNPO2-206ENST00000610556 KRTAP7-1Q8IUC3 87 aa4.27□□□□□ -1.73
SYNPO2-206ENST00000610556 TP53AIP1Q9HCN2 124 aa4.27□□□□□ -1.73
SYNPO2-206ENST00000610556 C8orf17Q9NRJ1 99 aa4.27□□□□□ -1.73
SYNPO2-206ENST00000610556 CD164Q04900 197 aa4.26□□□□□ -1.73
SYNPO2-206ENST00000610556 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.26□□□□□ -1.73
SYNPO2-206ENST00000610556 PSORS1C2Q9UIG4 136 aa4.26□□□□□ -1.73
SYNPO2-206ENST00000610556 A0A087WTM6 91 aa4.25□□□□□ -1.73
SYNPO2-206ENST00000610556 MRPL34Q9BQ48 92 aaKnown RBP4.25□□□□□ -1.73
SYNPO2-206ENST00000610556 IGKV2D-30A0A075B6S6 120 aa4.24□□□□□ -1.73
SYNPO2-206ENST00000610556 IGKV2-30P06310 120 aa4.24□□□□□ -1.73
SYNPO2-206ENST00000610556 SPINK1P00995 79 aa4.24□□□□□ -1.73
SYNPO2-206ENST00000610556 SPACA4Q8TDM5 124 aa4.24□□□□□ -1.73
SYNPO2-206ENST00000610556 A0A1B0GVX0 72 aa4.23□□□□□ -1.73
SYNPO2-206ENST00000610556 PANO1I0J062 215 aa4.23□□□□□ -1.73
SYNPO2-206ENST00000610556 ZNF861PO60384 105 aa4.23□□□□□ -1.73
SYNPO2-206ENST00000610556 KRTAP11-1Q8IUC1 163 aa4.23□□□□□ -1.73
SYNPO2-206ENST00000610556 LINC00472Q9H8W2 130 aa4.21□□□□□ -1.73
SYNPO2-206ENST00000610556 CYP4F30PQ9H0H9 118 aa4.21□□□□□ -1.74
SYNPO2-206ENST00000610556 MMP24-AS1A0A0U1RRL7 71 aa4.21□□□□□ -1.74
SYNPO2-206ENST00000610556 Q1T7F1 81 aa4.2□□□□□ -1.74
SYNPO2-206ENST00000610556 IGLV8-61A0A075B6I0 122 aa4.2□□□□□ -1.74
SYNPO2-206ENST00000610556 LINC00313P59037 77 aa4.2□□□□□ -1.74
SYNPO2-206ENST00000610556 DYNC2H1Q8NCM8 4307 aaKnown RBP4.2□□□□□ -1.74
SYNPO2-206ENST00000610556 DNAH7Q8WXX0 4024 aa4.2□□□□□ -1.74
SYNPO2-206ENST00000610556 SPANXA2-OT1Q8N9U9 137 aa4.2□□□□□ -1.74
SYNPO2-206ENST00000610556 TENM2Q9NT68 2774 aa4.19□□□□□ -1.74
SYNPO2-206ENST00000610556 ACYP2P14621 99 aa4.19□□□□□ -1.74
SYNPO2-206ENST00000610556 PRR26Q8N8Z3 221 aa4.19□□□□□ -1.74
SYNPO2-206ENST00000610556 LOC101927531A0A1B0GV80 90 aa4.18□□□□□ -1.74
SYNPO2-206ENST00000610556 SPRR1BP22528 89 aa4.18□□□□□ -1.74
SYNPO2-206ENST00000610556 ZCCHC13Q8WW36 166 aaKnown RBP4.18□□□□□ -1.74
SYNPO2-206ENST00000610556 Q8N9P0 234 aaPredicted RBP4.17□□□□□ -1.74
SYNPO2-206ENST00000610556 A0A1B0GU69 56 aa4.17□□□□□ -1.74
SYNPO2-206ENST00000610556 IGLV7-43P04211 117 aa4.17□□□□□ -1.74
SYNPO2-206ENST00000610556 DNAH1Q9P2D7 4330 aa4.17□□□□□ -1.74
SYNPO2-206ENST00000610556 KRTAP29-1A8MX34 341 aaPredicted RBP4.16□□□□□ -1.74
SYNPO2-206ENST00000610556 IGLV7-46A0A075B6I9 117 aa4.15□□□□□ -1.74
SYNPO2-206ENST00000610556 C7orf65Q6ZTY9 151 aa4.15□□□□□ -1.74
SYNPO2-206ENST00000610556 Q5VV11 94 aa4.14□□□□□ -1.75
SYNPO2-206ENST00000610556 DNHD1Q96M86 4753 aa4.14□□□□□ -1.75
SYNPO2-206ENST00000610556 FAM229AH3BQW9 127 aa4.14□□□□□ -1.75
SYNPO2-206ENST00000610556 SSBP3-AS1Q7Z2R9 100 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms