RNA–Protein interactions for RNA: ENST00000609021.1

HDDC2-208, Transcript of HD domain containing 2, humanhuman

Gene HDDC2, Length 3,529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-208ENST00000609021 KAAG1Q9UBP8 84 aa3.02□□□□□ -1.93
HDDC2-208ENST00000609021 ANKHD1Q8IWZ3 2542 aaKnown RBP3.02□□□□□ -1.93
HDDC2-208ENST00000609021 ZFP36P26651 326 aaKnown RBP3.02□□□□□ -1.93
HDDC2-208ENST00000609021 CASC10Q5T4H9 136 aa3.02□□□□□ -1.93
HDDC2-208ENST00000609021 MINOS1Q5TGZ0 78 aa3.02□□□□□ -1.93
HDDC2-208ENST00000609021 C9orf163Q8N9P6 203 aa3.02□□□□□ -1.93
HDDC2-208ENST00000609021 DYNC2H1Q8NCM8 4307 aaKnown RBP3.01□□□□□ -1.93
HDDC2-208ENST00000609021 NUPR2A6NF83 97 aa3.01□□□□□ -1.93
HDDC2-208ENST00000609021 RHPN1-AS1Q9BWJ2 59 aa3.01□□□□□ -1.93
HDDC2-208ENST00000609021 ACYP2P14621 99 aa3.01□□□□□ -1.93
HDDC2-208ENST00000609021 DSCR10P59022 87 aa3.01□□□□□ -1.93
HDDC2-208ENST00000609021 CSNK1G2-AS1Q8NCQ2 148 aa3.01□□□□□ -1.93
HDDC2-208ENST00000609021 TLN2Q9Y4G6 2542 aa3□□□□□ -1.93
HDDC2-208ENST00000609021 CSMD3Q7Z407 3707 aa3□□□□□ -1.93
HDDC2-208ENST00000609021 CHD6Q8TD26 2715 aa3□□□□□ -1.93
HDDC2-208ENST00000609021 A8MUU9 505 aa3□□□□□ -1.93
HDDC2-208ENST00000609021 ZNF861PO60384 105 aa3□□□□□ -1.93
HDDC2-208ENST00000609021 SPRR4Q96PI1 79 aa3□□□□□ -1.93
HDDC2-208ENST00000609021 HRES1P13985 223 aa3□□□□□ -1.93
HDDC2-208ENST00000609021 PLA2G2AP14555 144 aa3□□□□□ -1.93
HDDC2-208ENST00000609021 EGFEM1PQ0D2K5 195 aa2.99□□□□□ -1.93
HDDC2-208ENST00000609021 Q8NBF4 154 aa2.99□□□□□ -1.93
HDDC2-208ENST00000609021 CIRBP-AS1Q8TBR5 109 aa2.99□□□□□ -1.93
HDDC2-208ENST00000609021 HELZ2Q9BYK8 2649 aaKnown RBP2.99□□□□□ -1.93
HDDC2-208ENST00000609021 DEFB131BA0A096LNP1 70 aa2.99□□□□□ -1.93
HDDC2-208ENST00000609021 KRTAP5-3Q6L8H2 238 aa2.99□□□□□ -1.93
HDDC2-208ENST00000609021 HIVEP3Q5T1R4 2406 aa2.98□□□□□ -1.93
HDDC2-208ENST00000609021 USP24Q9UPU5 2620 aa2.98□□□□□ -1.93
HDDC2-208ENST00000609021 A6NDX4 124 aa2.98□□□□□ -1.93
HDDC2-208ENST00000609021 IGLV1-40P01703 118 aa2.98□□□□□ -1.93
HDDC2-208ENST00000609021 Q6ZSN1 163 aa2.98□□□□□ -1.93
HDDC2-208ENST00000609021 LYPD2Q6UXB3 125 aa2.98□□□□□ -1.93
HDDC2-208ENST00000609021 KRTAP4-9Q9BYQ8 210 aa2.98□□□□□ -1.93
HDDC2-208ENST00000609021 DNAH7Q8WXX0 4024 aa2.97□□□□□ -1.93
HDDC2-208ENST00000609021 A0A087WSZ3 146 aa2.97□□□□□ -1.93
HDDC2-208ENST00000609021 IGLV5-52A0A0A0MRZ9 124 aa2.97□□□□□ -1.93
HDDC2-208ENST00000609021 IGLV6-57P01721 117 aa2.97□□□□□ -1.93
HDDC2-208ENST00000609021 KLK9Q2XQG4 91 aa2.97□□□□□ -1.93
HDDC2-208ENST00000609021 LCE3BQ5TA77 95 aa2.97□□□□□ -1.93
HDDC2-208ENST00000609021 CENPEQ02224 2701 aa2.97□□□□□ -1.93
HDDC2-208ENST00000609021 KRTAP9-8Q9BYQ0 159 aa2.97□□□□□ -1.93
HDDC2-208ENST00000609021 KRTAP4-2Q9BYR5 136 aa2.97□□□□□ -1.93
HDDC2-208ENST00000609021 TP53AIP1Q9HCN2 124 aa2.97□□□□□ -1.93
HDDC2-208ENST00000609021 C6orf48Q9UBA6 75 aa2.97□□□□□ -1.93
HDDC2-208ENST00000609021 FLNCQ14315 2725 aa2.97□□□□□ -1.93
HDDC2-208ENST00000609021 IGLV8-61A0A075B6I0 122 aa2.97□□□□□ -1.93
HDDC2-208ENST00000609021 PRR34Q9NV39 138 aa2.97□□□□□ -1.93
HDDC2-208ENST00000609021 HIVEP2P31629 2446 aa2.96□□□□□ -1.93
HDDC2-208ENST00000609021 MXRA5Q9NR99 2828 aa2.96□□□□□ -1.94
HDDC2-208ENST00000609021 ATRQ13535 2644 aa2.96□□□□□ -1.94
HDDC2-208ENST00000609021 LYSTQ99698 3801 aa2.96□□□□□ -1.94
HDDC2-208ENST00000609021 CAMK2N1Q7Z7J9 78 aa2.96□□□□□ -1.94
HDDC2-208ENST00000609021 FLG2Q5D862 2391 aaPredicted RBP2.96□□□□□ -1.94
HDDC2-208ENST00000609021 OTOGQ6ZRI0 2925 aa2.96□□□□□ -1.94
HDDC2-208ENST00000609021 G3V318 75 aa2.96□□□□□ -1.94
HDDC2-208ENST00000609021 ODF3BA8MYP8 253 aa2.95□□□□□ -1.94
HDDC2-208ENST00000609021 IGLV5-48A0A075B6I7 105 aa2.95□□□□□ -1.94
HDDC2-208ENST00000609021 C7orf33Q8WU49 177 aa2.95□□□□□ -1.94
HDDC2-208ENST00000609021 F8P00451 2351 aa2.95□□□□□ -1.94
HDDC2-208ENST00000609021 A0A1W2PPR1 153 aa2.94□□□□□ -1.94
HDDC2-208ENST00000609021 APCP25054 2843 aa2.94□□□□□ -1.94
HDDC2-208ENST00000609021 SETD2Q9BYW2 2564 aaPredicted RBP2.94□□□□□ -1.94
HDDC2-208ENST00000609021 PRKDCP78527 4128 aaKnown RBP2.94□□□□□ -1.94
HDDC2-208ENST00000609021 CLPSL2Q6UWE3 100 aa2.94□□□□□ -1.94
HDDC2-208ENST00000609021 IGLV5-37A0A075B6J1 123 aa2.94□□□□□ -1.94
HDDC2-208ENST00000609021 Q5W150 140 aa2.94□□□□□ -1.94
HDDC2-208ENST00000609021 CRIPTQ9P021 101 aa2.94□□□□□ -1.94
HDDC2-208ENST00000609021 FN1P02751 2386 aaKnown RBP2.93□□□□□ -1.94
HDDC2-208ENST00000609021 CCL19Q99731 98 aa2.93□□□□□ -1.94
HDDC2-208ENST00000609021 ACANP16112 2415 aa2.93□□□□□ -1.94
HDDC2-208ENST00000609021 NOTCH1P46531 2555 aa2.92□□□□□ -1.94
HDDC2-208ENST00000609021 RPL37AP61513 92 aaKnown RBP2.92□□□□□ -1.94
HDDC2-208ENST00000609021 LCE1DQ5T752 114 aa2.92□□□□□ -1.94
HDDC2-208ENST00000609021 USMG5Q96IX5 58 aa2.92□□□□□ -1.94
HDDC2-208ENST00000609021 GCN1Q92616 2671 aaKnown RBP2.92□□□□□ -1.94
HDDC2-208ENST00000609021 DEFB109BQ30KR1 87 aa2.92□□□□□ -1.94
HDDC2-208ENST00000609021 IGKV2-24A0A0C4DH68 120 aa2.91□□□□□ -1.94
HDDC2-208ENST00000609021 KRTAP21-3Q3LHN1 58 aa2.91□□□□□ -1.94
HDDC2-208ENST00000609021 UNQ6190/PRO20217Q6UXQ8 127 aa2.91□□□□□ -1.94
HDDC2-208ENST00000609021 Q8N377 158 aa2.91□□□□□ -1.94
HDDC2-208ENST00000609021 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.91□□□□□ -1.94
HDDC2-208ENST00000609021 USP9YO00507 2555 aaPredicted RBP2.91□□□□□ -1.94
HDDC2-208ENST00000609021 KRTAP29-1A8MX34 341 aaPredicted RBP2.9□□□□□ -1.94
HDDC2-208ENST00000609021 IGLV7-43P04211 117 aa2.9□□□□□ -1.94
HDDC2-208ENST00000609021 LINC00472Q9H8W2 130 aa2.9□□□□□ -1.94
HDDC2-208ENST00000609021 ZANQ9Y493 2812 aa2.9□□□□□ -1.95
HDDC2-208ENST00000609021 DEFB131AP59861 70 aa2.9□□□□□ -1.95
HDDC2-208ENST00000609021 NBEAL1Q6ZS30 2694 aa2.9□□□□□ -1.95
HDDC2-208ENST00000609021 FRAS1Q86XX4 4008 aa2.9□□□□□ -1.95
HDDC2-208ENST00000609021 A0A1B0GVX0 72 aa2.89□□□□□ -1.95
HDDC2-208ENST00000609021 KRTAP4-16G5E9R7 235 aaPredicted RBP2.89□□□□□ -1.95
HDDC2-208ENST00000609021 ANGP03950 147 aaKnown RBP2.89□□□□□ -1.95
HDDC2-208ENST00000609021 J3QKU1 62 aa2.88□□□□□ -1.95
HDDC2-208ENST00000609021 LINC00304Q8N9R0 145 aa2.88□□□□□ -1.95
HDDC2-208ENST00000609021 DNAH9Q9NYC9 4486 aa2.87□□□□□ -1.95
HDDC2-208ENST00000609021 KRTAP26-1Q6PEX3 210 aa2.87□□□□□ -1.95
HDDC2-208ENST00000609021 MGAM2Q2M2H8 2515 aa2.87□□□□□ -1.95
HDDC2-208ENST00000609021 C5orf56Q8N8D9 126 aa2.87□□□□□ -1.95
HDDC2-208ENST00000609021 A0A087WTM6 91 aa2.86□□□□□ -1.95
HDDC2-208ENST00000609021 NOP10Q9NPE3 64 aaKnown RBP2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms