RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 MUSTN1Q8IVN3 82 aa9.59□□□□□ -0.87
SHKBP1-227ENST00000602011 HIGD1BQ9P298 99 aa9.59□□□□□ -0.87
SHKBP1-227ENST00000602011 IGLV5-48A0A075B6I7 105 aa9.58□□□□□ -0.88
SHKBP1-227ENST00000602011 LOC105371267A0A1B0GV96 52 aa9.57□□□□□ -0.88
SHKBP1-227ENST00000602011 C1orf195Q5TG92 126 aa9.57□□□□□ -0.88
SHKBP1-227ENST00000602011 NHP2Q9NX24 153 aaKnown RBP9.57□□□□□ -0.88
SHKBP1-227ENST00000602011 TCL1BO95988 128 aa9.56□□□□□ -0.88
SHKBP1-227ENST00000602011 SMIM6P0DI80 62 aa9.56□□□□□ -0.88
SHKBP1-227ENST00000602011 LORP23490 312 aaPredicted RBP9.56□□□□□ -0.88
SHKBP1-227ENST00000602011 KRTAP10-6P60371 365 aaPredicted RBP9.56□□□□□ -0.88
SHKBP1-227ENST00000602011 SMIM29Q86T20 159 aa9.56□□□□□ -0.88
SHKBP1-227ENST00000602011 HIST1H4GQ99525 98 aa9.56□□□□□ -0.88
SHKBP1-227ENST00000602011 RPL37P61927 97 aaKnown RBP9.55□□□□□ -0.88
SHKBP1-227ENST00000602011 UQCR10Q9UDW1 63 aa9.53□□□□□ -0.88
SHKBP1-227ENST00000602011 A6NDN8 102 aa9.52□□□□□ -0.89
SHKBP1-227ENST00000602011 TRAV13-2A0A0B4J235 113 aa9.51□□□□□ -0.89
SHKBP1-227ENST00000602011 M0R2T5 61 aa9.51□□□□□ -0.89
SHKBP1-227ENST00000602011 COX6B2Q6YFQ2 88 aa9.5□□□□□ -0.89
SHKBP1-227ENST00000602011 C2orf91Q6ZV80 131 aa9.5□□□□□ -0.89
SHKBP1-227ENST00000602011 FLGP20930 4061 aaPredicted RBP9.47□□□□□ -0.89
SHKBP1-227ENST00000602011 VAMP3Q15836 100 aa9.47□□□□□ -0.89
SHKBP1-227ENST00000602011 F8WEM9 126 aa9.46□□□□□ -0.9
SHKBP1-227ENST00000602011 CEND1Q8N111 149 aa9.46□□□□□ -0.9
SHKBP1-227ENST00000602011 TMEM238LA0A1B0GVL6 79 aa9.44□□□□□ -0.9
SHKBP1-227ENST00000602011 A6NJY4 79 aa9.44□□□□□ -0.9
SHKBP1-227ENST00000602011 HSD52Q0P140 79 aa9.44□□□□□ -0.9
SHKBP1-227ENST00000602011 Q6JHZ5 121 aa9.44□□□□□ -0.9
SHKBP1-227ENST00000602011 C12orf57Q99622 126 aa9.44□□□□□ -0.9
SHKBP1-227ENST00000602011 SMIM11BQ8TCY0 68 aa9.41□□□□□ -0.9
SHKBP1-227ENST00000602011 A0A0G2JQZ4 141 aa9.4□□□□□ -0.9
SHKBP1-227ENST00000602011 TSTD3H0UI37 97 aa9.4□□□□□ -0.9
SHKBP1-227ENST00000602011 RAB37Q96AX2 223 aa9.4□□□□□ -0.9
SHKBP1-227ENST00000602011 A0A0B4J2C4 111 aa9.39□□□□□ -0.91
SHKBP1-227ENST00000602011 CFC1P0CG37 223 aa9.39□□□□□ -0.91
SHKBP1-227ENST00000602011 ATP11AUNQ6ZP68 121 aa9.39□□□□□ -0.91
SHKBP1-227ENST00000602011 LINC00575Q6W349 94 aa9.37□□□□□ -0.91
SHKBP1-227ENST00000602011 CLEC2BQ92478 149 aa9.36□□□□□ -0.91
SHKBP1-227ENST00000602011 TRBV7-7A0A0K0K1E9 115 aa9.35□□□□□ -0.91
SHKBP1-227ENST00000602011 hADV29S1A0JD25 119 aa9.35□□□□□ -0.91
SHKBP1-227ENST00000602011 FXYD2P54710 66 aa9.35□□□□□ -0.91
SHKBP1-227ENST00000602011 Q75L30 129 aa9.35□□□□□ -0.91
SHKBP1-227ENST00000602011 PPDPFLQ8WWR9 84 aa9.35□□□□□ -0.91
SHKBP1-227ENST00000602011 PRO1854Q9UHT4 67 aa9.35□□□□□ -0.91
SHKBP1-227ENST00000602011 OCIAD2Q56VL3 154 aa9.34□□□□□ -0.91
SHKBP1-227ENST00000602011 BVES-AS1Q5T3Y7 98 aa9.32□□□□□ -0.92
SHKBP1-227ENST00000602011 Q6ZQY7 126 aa9.32□□□□□ -0.92
SHKBP1-227ENST00000602011 M0R143 59 aa9.31□□□□□ -0.92
SHKBP1-227ENST00000602011 IGFL1Q6UW32 110 aa9.3□□□□□ -0.92
SHKBP1-227ENST00000602011 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.3□□□□□ -0.92
SHKBP1-227ENST00000602011 KRTAP9-7A8MTY7 169 aa9.29□□□□□ -0.92
SHKBP1-227ENST00000602011 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.28□□□□□ -0.92
SHKBP1-227ENST00000602011 H0YGX0 51 aa9.28□□□□□ -0.92
SHKBP1-227ENST00000602011 LST1O00453 97 aa9.28□□□□□ -0.92
SHKBP1-227ENST00000602011 OBSCN-AS1Q96MR7 158 aa9.28□□□□□ -0.92
SHKBP1-227ENST00000602011 SNCGO76070 127 aa9.27□□□□□ -0.93
SHKBP1-227ENST00000602011 SNHG12Q9BXW3 62 aa9.27□□□□□ -0.93
SHKBP1-227ENST00000602011 Q6Q795 121 aa9.26□□□□□ -0.93
SHKBP1-227ENST00000602011 SS18L2Q9UHA2 77 aa9.25□□□□□ -0.93
SHKBP1-227ENST00000602011 USH2AO75445 5202 aa9.24□□□□□ -0.93
SHKBP1-227ENST00000602011 COX6CP09669 75 aa9.23□□□□□ -0.93
SHKBP1-227ENST00000602011 SSPOA2VEC9 5147 aa9.22□□□□□ -0.93
SHKBP1-227ENST00000602011 K7ERJ3 54 aa9.21□□□□□ -0.94
SHKBP1-227ENST00000602011 PSMB2P49721 201 aa9.21□□□□□ -0.94
SHKBP1-227ENST00000602011 Q96NJ1 140 aa9.21□□□□□ -0.94
SHKBP1-227ENST00000602011 TRBV20-1A0A075B6N2 111 aa9.2□□□□□ -0.94
SHKBP1-227ENST00000602011 A0A1B0GX51 115 aa9.2□□□□□ -0.94
SHKBP1-227ENST00000602011 C20orf166-AS1Q96NR2 134 aa9.19□□□□□ -0.94
SHKBP1-227ENST00000602011 TRIAP1O43715 76 aa9.18□□□□□ -0.94
SHKBP1-227ENST00000602011 GHRHP01286 108 aa9.17□□□□□ -0.94
SHKBP1-227ENST00000602011 TEN1Q86WV5 123 aa9.17□□□□□ -0.94
SHKBP1-227ENST00000602011 A8MUU9 505 aa9.15□□□□□ -0.94
SHKBP1-227ENST00000602011 SCGB1C2P0DMR2 95 aa9.15□□□□□ -0.94
SHKBP1-227ENST00000602011 BATFQ16520 125 aa9.14□□□□□ -0.95
SHKBP1-227ENST00000602011 H3BUT2 72 aa9.13□□□□□ -0.95
SHKBP1-227ENST00000602011 H3BQ85 93 aa9.11□□□□□ -0.95
SHKBP1-227ENST00000602011 FAM218AQ96MZ4 157 aa9.11□□□□□ -0.95
SHKBP1-227ENST00000602011 DNAL4O96015 105 aa9.09□□□□□ -0.95
SHKBP1-227ENST00000602011 NDUFV3P56181 108 aaKnown RBP9.09□□□□□ -0.95
SHKBP1-227ENST00000602011 KRTAP9-8Q9BYQ0 159 aa9.09□□□□□ -0.95
SHKBP1-227ENST00000602011 FCGBPQ9Y6R7 5405 aaPredicted RBP9.08□□□□□ -0.96
SHKBP1-227ENST00000602011 LYRM7Q5U5X0 104 aa9.07□□□□□ -0.96
SHKBP1-227ENST00000602011 TRACP01848 142 aa9.06□□□□□ -0.96
SHKBP1-227ENST00000602011 A0A087WSZ3 146 aa9.05□□□□□ -0.96
SHKBP1-227ENST00000602011 C9orf118A6NHY6 69 aa9.05□□□□□ -0.96
SHKBP1-227ENST00000602011 PCP4L1A6NKN8 68 aa9.04□□□□□ -0.96
SHKBP1-227ENST00000602011 ORMDL1Q9P0S3 153 aa9.04□□□□□ -0.96
SHKBP1-227ENST00000602011 H3BMG7 143 aa9.03□□□□□ -0.96
SHKBP1-227ENST00000602011 TMEM256-PLSCR3K7ERE1 68 aa9.03□□□□□ -0.96
SHKBP1-227ENST00000602011 TAX1BP3O14907 124 aa9.03□□□□□ -0.96
SHKBP1-227ENST00000602011 ATXN8Q156A1 80 aa9.03□□□□□ -0.96
SHKBP1-227ENST00000602011 COL5A1-AS1Q5SY13 56 aa9.03□□□□□ -0.96
SHKBP1-227ENST00000602011 LINC00313P59037 77 aa9.01□□□□□ -0.97
SHKBP1-227ENST00000602011 NAA38Q9BRA0 125 aaKnown RBP9.01□□□□□ -0.97
SHKBP1-227ENST00000602011 FABP2P12104 132 aa9□□□□□ -0.97
SHKBP1-227ENST00000602011 RBM12B-AS1Q9P1G2 102 aa8.99□□□□□ -0.97
SHKBP1-227ENST00000602011 FAM236DA0A1B0GTK5 79 aa8.98□□□□□ -0.97
SHKBP1-227ENST00000602011 FAM236CP0DP71 79 aa8.98□□□□□ -0.97
SHKBP1-227ENST00000602011 DSCR10P59022 87 aa8.98□□□□□ -0.97
SHKBP1-227ENST00000602011 A0A1W2PPM0 123 aa8.97□□□□□ -0.97
SHKBP1-227ENST00000602011 UBE2V1Q13404 147 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms