RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 TEN1Q86WV5 123 aa8.73□□□□□ -1.01
TGFB1-202ENST00000597453 Q9BRP9 147 aa8.73□□□□□ -1.01
TGFB1-202ENST00000597453 ATXN8Q156A1 80 aa8.72□□□□□ -1.01
TGFB1-202ENST00000597453 PPDPFLQ8WWR9 84 aa8.72□□□□□ -1.01
TGFB1-202ENST00000597453 A0A0U1RQV1 116 aa8.71□□□□□ -1.02
TGFB1-202ENST00000597453 SCGB1A1P11684 91 aa8.71□□□□□ -1.02
TGFB1-202ENST00000597453 COX6CP09669 75 aa8.7□□□□□ -1.02
TGFB1-202ENST00000597453 IGLV7-46A0A075B6I9 117 aa8.69□□□□□ -1.02
TGFB1-202ENST00000597453 ERC2-IT1O76042 136 aa8.69□□□□□ -1.02
TGFB1-202ENST00000597453 TPRXLQ17RH7 258 aa8.69□□□□□ -1.02
TGFB1-202ENST00000597453 Q1RN00 199 aa8.69□□□□□ -1.02
TGFB1-202ENST00000597453 LINC00483Q53H64 154 aa8.69□□□□□ -1.02
TGFB1-202ENST00000597453 C6orf99Q4VX62 202 aa8.68□□□□□ -1.02
TGFB1-202ENST00000597453 CDIP1Q9H305 208 aa8.68□□□□□ -1.02
TGFB1-202ENST00000597453 TRAV13-2A0A0B4J235 113 aa8.67□□□□□ -1.02
TGFB1-202ENST00000597453 SLC25A20O43772 301 aa8.67□□□□□ -1.02
TGFB1-202ENST00000597453 ELOF1P60002 83 aaKnown RBP8.67□□□□□ -1.02
TGFB1-202ENST00000597453 H3BT86 120 aa8.66□□□□□ -1.02
TGFB1-202ENST00000597453 TRIAP1O43715 76 aa8.66□□□□□ -1.02
TGFB1-202ENST00000597453 SIGMAR1Q99720 223 aa8.66□□□□□ -1.02
TGFB1-202ENST00000597453 TRBV7-6A0A0J9YX20 115 aa8.65□□□□□ -1.02
TGFB1-202ENST00000597453 COX7BP24311 80 aa8.65□□□□□ -1.02
TGFB1-202ENST00000597453 LCE2AQ5TA79 106 aaPredicted RBP8.65□□□□□ -1.02
TGFB1-202ENST00000597453 GAGE2AQ6NT46 116 aa8.65□□□□□ -1.02
TGFB1-202ENST00000597453 MTURNQ8N3F0 131 aa8.65□□□□□ -1.02
TGFB1-202ENST00000597453 ANKRD29Q8N6D5 301 aa8.65□□□□□ -1.02
TGFB1-202ENST00000597453 DHRS4-AS1Q9P1J3 65 aa8.65□□□□□ -1.02
TGFB1-202ENST00000597453 C9JAW5 83 aa8.64□□□□□ -1.03
TGFB1-202ENST00000597453 LST1O00453 97 aa8.64□□□□□ -1.03
TGFB1-202ENST00000597453 SPAG11AQ6PDA7 123 aa8.63□□□□□ -1.03
TGFB1-202ENST00000597453 H7C2G1 150 aa8.62□□□□□ -1.03
TGFB1-202ENST00000597453 Q8NBF4 154 aa8.62□□□□□ -1.03
TGFB1-202ENST00000597453 SMIM11BQ8TCY0 68 aa8.62□□□□□ -1.03
TGFB1-202ENST00000597453 ST20-AS1Q8NBB2 130 aa8.6□□□□□ -1.03
TGFB1-202ENST00000597453 C21orf62-AS1Q17RA5 79 aa8.59□□□□□ -1.03
TGFB1-202ENST00000597453 C4orf48Q5BLP8 95 aa8.59□□□□□ -1.03
TGFB1-202ENST00000597453 SPRR1BP22528 89 aa8.58□□□□□ -1.04
TGFB1-202ENST00000597453 FP248Q71RG6 208 aaPredicted RBP8.58□□□□□ -1.04
TGFB1-202ENST00000597453 KRTAP9-2Q9BYQ4 174 aa8.58□□□□□ -1.04
TGFB1-202ENST00000597453 TRACP01848 142 aa8.57□□□□□ -1.04
TGFB1-202ENST00000597453 MOBPQ13875 183 aa8.57□□□□□ -1.04
TGFB1-202ENST00000597453 IGLV9-49A0A0B4J1Y8 123 aa8.56□□□□□ -1.04
TGFB1-202ENST00000597453 KRTAP13-3Q3SY46 172 aa8.56□□□□□ -1.04
TGFB1-202ENST00000597453 SSBP3-AS1Q7Z2R9 100 aa8.55□□□□□ -1.04
TGFB1-202ENST00000597453 FAM240AA0A1B0GVK7 77 aa8.54□□□□□ -1.04
TGFB1-202ENST00000597453 SPINK1P00995 79 aa8.54□□□□□ -1.04
TGFB1-202ENST00000597453 CLEC2BQ92478 149 aa8.53□□□□□ -1.04
TGFB1-202ENST00000597453 C9orf153Q5TBE3 101 aa8.52□□□□□ -1.05
TGFB1-202ENST00000597453 IGLV5-48A0A075B6I7 105 aa8.51□□□□□ -1.05
TGFB1-202ENST00000597453 TEX49A0A1B0GTD5 131 aa8.51□□□□□ -1.05
TGFB1-202ENST00000597453 H0YGX0 51 aa8.51□□□□□ -1.05
TGFB1-202ENST00000597453 LINC01547P58512 204 aaPredicted RBP8.5□□□□□ -1.05
TGFB1-202ENST00000597453 LINC00575Q6W349 94 aa8.5□□□□□ -1.05
TGFB1-202ENST00000597453 DEFB105AQ8NG35 78 aa8.5□□□□□ -1.05
TGFB1-202ENST00000597453 LAMTOR3Q9UHA4 124 aa8.5□□□□□ -1.05
TGFB1-202ENST00000597453 ACYP1P07311 99 aa8.48□□□□□ -1.05
TGFB1-202ENST00000597453 RPS29P62273 56 aaKnown RBP8.48□□□□□ -1.05
TGFB1-202ENST00000597453 ASB16-AS1Q495Z4 193 aa8.48□□□□□ -1.05
TGFB1-202ENST00000597453 Q8N377 158 aa8.48□□□□□ -1.05
TGFB1-202ENST00000597453 hADV29S1A0JD25 119 aa8.47□□□□□ -1.05
TGFB1-202ENST00000597453 Q6Q795 121 aa8.47□□□□□ -1.05
TGFB1-202ENST00000597453 KRTAP4-1Q9BYQ7 146 aa8.47□□□□□ -1.05
TGFB1-202ENST00000597453 A0A1B0GX51 115 aa8.46□□□□□ -1.06
TGFB1-202ENST00000597453 SMIM29Q86T20 159 aa8.46□□□□□ -1.06
TGFB1-202ENST00000597453 MT-ATP8P03928 68 aa8.45□□□□□ -1.06
TGFB1-202ENST00000597453 A0A1B0GV72 72 aa8.44□□□□□ -1.06
TGFB1-202ENST00000597453 Q6ZQY7 126 aa8.44□□□□□ -1.06
TGFB1-202ENST00000597453 SNCGO76070 127 aa8.42□□□□□ -1.06
TGFB1-202ENST00000597453 BAALC-AS2P0C853 105 aa8.42□□□□□ -1.06
TGFB1-202ENST00000597453 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.42□□□□□ -1.06
TGFB1-202ENST00000597453 FAM218AQ96MZ4 157 aa8.42□□□□□ -1.06
TGFB1-202ENST00000597453 DNAL4O96015 105 aa8.41□□□□□ -1.06
TGFB1-202ENST00000597453 SEC61BP60468 96 aaKnown RBP8.4□□□□□ -1.06
TGFB1-202ENST00000597453 CD164Q04900 197 aa8.38□□□□□ -1.07
TGFB1-202ENST00000597453 F8WEM9 126 aa8.37□□□□□ -1.07
TGFB1-202ENST00000597453 XP32Q5T750 250 aa8.37□□□□□ -1.07
TGFB1-202ENST00000597453 OBSCN-AS1Q96MR7 158 aa8.37□□□□□ -1.07
TGFB1-202ENST00000597453 LIMD2Q9BT23 127 aa8.37□□□□□ -1.07
TGFB1-202ENST00000597453 TRBV7-7A0A0K0K1E9 115 aa8.36□□□□□ -1.07
TGFB1-202ENST00000597453 IMUPQ9GZP8 106 aa8.36□□□□□ -1.07
TGFB1-202ENST00000597453 HRCT1Q6UXD1 115 aa8.35□□□□□ -1.07
TGFB1-202ENST00000597453 IGLV8-61A0A075B6I0 122 aa8.34□□□□□ -1.07
TGFB1-202ENST00000597453 LINC00643Q86TS7 51 aa8.34□□□□□ -1.07
TGFB1-202ENST00000597453 ORMDL1Q9P0S3 153 aa8.34□□□□□ -1.07
TGFB1-202ENST00000597453 KRTAP9-6A0A140TA67 174 aa8.33□□□□□ -1.08
TGFB1-202ENST00000597453 H3BQ85 93 aa8.33□□□□□ -1.08
TGFB1-202ENST00000597453 A0A0G2JQZ4 141 aa8.31□□□□□ -1.08
TGFB1-202ENST00000597453 Q5XG85 94 aa8.31□□□□□ -1.08
TGFB1-202ENST00000597453 Q6JHZ5 121 aa8.31□□□□□ -1.08
TGFB1-202ENST00000597453 JMJD7-PLA2G4BH0Y9G9 81 aa8.3□□□□□ -1.08
TGFB1-202ENST00000597453 GHRHP01286 108 aa8.29□□□□□ -1.08
TGFB1-202ENST00000597453 TMEM256-PLSCR3K7ERE1 68 aa8.28□□□□□ -1.08
TGFB1-202ENST00000597453 NDUFV3P56181 108 aaKnown RBP8.28□□□□□ -1.08
TGFB1-202ENST00000597453 IGFL1Q6UW32 110 aa8.28□□□□□ -1.08
TGFB1-202ENST00000597453 ANAPC13Q9BS18 74 aa8.28□□□□□ -1.08
TGFB1-202ENST00000597453 LCE2CQ5TA81 110 aa8.27□□□□□ -1.09
TGFB1-202ENST00000597453 C9orf92A6NGG3 77 aa8.25□□□□□ -1.09
TGFB1-202ENST00000597453 FSIP2Q5CZC0 6907 aa8.24□□□□□ -1.09
TGFB1-202ENST00000597453 KRTAP19-2Q3LHN2 52 aa8.24□□□□□ -1.09
TGFB1-202ENST00000597453 PCOTHQ58A44 107 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms