RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 IGFL1Q6UW32 110 aa8.95□□□□□ -0.98
CDK5RAP3-237ENST00000585163 KRTAP1-5Q9BYS1 174 aa8.95□□□□□ -0.98
CDK5RAP3-237ENST00000585163 A0A1W2PNN7 141 aa8.94□□□□□ -0.98
CDK5RAP3-237ENST00000585163 IGKV2-24A0A0C4DH68 120 aa8.94□□□□□ -0.98
CDK5RAP3-237ENST00000585163 PRLHP81277 87 aa8.94□□□□□ -0.98
CDK5RAP3-237ENST00000585163 A0A0G2JQZ4 141 aa8.93□□□□□ -0.98
CDK5RAP3-237ENST00000585163 DNAH10Q8IVF4 4471 aa8.93□□□□□ -0.98
CDK5RAP3-237ENST00000585163 IGLV8-61A0A075B6I0 122 aa8.93□□□□□ -0.98
CDK5RAP3-237ENST00000585163 MPLKIPQ8TAP9 179 aa8.91□□□□□ -0.98
CDK5RAP3-237ENST00000585163 PSCAO43653 123 aa8.91□□□□□ -0.98
CDK5RAP3-237ENST00000585163 HCG22E2RYF7 251 aa8.9□□□□□ -0.98
CDK5RAP3-237ENST00000585163 LYSTQ99698 3801 aa8.9□□□□□ -0.98
CDK5RAP3-237ENST00000585163 ZCCHC13Q8WW36 166 aaKnown RBP8.89□□□□□ -0.99
CDK5RAP3-237ENST00000585163 KTN1-AS1Q86SY8 53 aa8.88□□□□□ -0.99
CDK5RAP3-237ENST00000585163 DNAH9Q9NYC9 4486 aa8.88□□□□□ -0.99
CDK5RAP3-237ENST00000585163 COL6A5A8TX70 2615 aa8.88□□□□□ -0.99
CDK5RAP3-237ENST00000585163 A0A087WSZ3 146 aa8.87□□□□□ -0.99
CDK5RAP3-237ENST00000585163 FAM229BQ4G0N7 80 aa8.87□□□□□ -0.99
CDK5RAP3-237ENST00000585163 DEFB116Q30KQ4 102 aa8.86□□□□□ -0.99
CDK5RAP3-237ENST00000585163 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.85□□□□□ -0.99
CDK5RAP3-237ENST00000585163 UBE2AP49459 152 aa8.85□□□□□ -0.99
CDK5RAP3-237ENST00000585163 KRTAP11-1Q8IUC1 163 aa8.85□□□□□ -0.99
CDK5RAP3-237ENST00000585163 H0Y9J4 135 aa8.84□□□□□ -0.99
CDK5RAP3-237ENST00000585163 C14orf177Q52M58 125 aa8.84□□□□□ -0.99
CDK5RAP3-237ENST00000585163 PHF5AQ7RTV0 110 aaKnown RBP8.84□□□□□ -0.99
CDK5RAP3-237ENST00000585163 CHTF8P0CG12 524 aa8.84□□□□□ -0.99
CDK5RAP3-237ENST00000585163 SPRR1BP22528 89 aa8.83□□□□□ -1
CDK5RAP3-237ENST00000585163 UBE2DNLQ8IWF7 75 aa8.83□□□□□ -1
CDK5RAP3-237ENST00000585163 APLNQ9ULZ1 77 aa8.82□□□□□ -1
CDK5RAP3-237ENST00000585163 COL7A1Q02388 2944 aa8.82□□□□□ -1
CDK5RAP3-237ENST00000585163 STAB2Q8WWQ8 2551 aa8.82□□□□□ -1
CDK5RAP3-237ENST00000585163 C8orf87E5RJ46 101 aa8.81□□□□□ -1
CDK5RAP3-237ENST00000585163 WFDC13Q8IUB5 93 aa8.81□□□□□ -1
CDK5RAP3-237ENST00000585163 hDV103S1A0JD37 113 aa8.8□□□□□ -1
CDK5RAP3-237ENST00000585163 RPL37AP61513 92 aaKnown RBP8.79□□□□□ -1
CDK5RAP3-237ENST00000585163 C9orf163Q8N9P6 203 aa8.79□□□□□ -1
CDK5RAP3-237ENST00000585163 SRRM2Q9UQ35 2752 aaKnown RBP8.79□□□□□ -1
CDK5RAP3-237ENST00000585163 KRTAP29-1A8MX34 341 aaPredicted RBP8.79□□□□□ -1
CDK5RAP3-237ENST00000585163 MGAM2Q2M2H8 2515 aa8.78□□□□□ -1
CDK5RAP3-237ENST00000585163 PRR26Q8N8Z3 221 aa8.77□□□□□ -1.01
CDK5RAP3-237ENST00000585163 C1orf64Q8NEQ6 169 aa8.77□□□□□ -1.01
CDK5RAP3-237ENST00000585163 LRCOL1A6NCL2 159 aa8.76□□□□□ -1.01
CDK5RAP3-237ENST00000585163 LINC00472Q9H8W2 130 aa8.76□□□□□ -1.01
CDK5RAP3-237ENST00000585163 DYNC2H1Q8NCM8 4307 aaKnown RBP8.75□□□□□ -1.01
CDK5RAP3-237ENST00000585163 NDUFB1O75438 58 aa8.75□□□□□ -1.01
CDK5RAP3-237ENST00000585163 MP68P56378 58 aa8.75□□□□□ -1.01
CDK5RAP3-237ENST00000585163 B9D2Q9BPU9 175 aa8.75□□□□□ -1.01
CDK5RAP3-237ENST00000585163 CYP4F30PQ9H0H9 118 aa8.75□□□□□ -1.01
CDK5RAP3-237ENST00000585163 DNAH7Q8WXX0 4024 aa8.74□□□□□ -1.01
CDK5RAP3-237ENST00000585163 NDUFS5O43920 106 aa8.74□□□□□ -1.01
CDK5RAP3-237ENST00000585163 A8MWP4 228 aa8.74□□□□□ -1.01
CDK5RAP3-237ENST00000585163 CASC2Q6XLA1 102 aa8.73□□□□□ -1.01
CDK5RAP3-237ENST00000585163 Q1T7F1 81 aa8.72□□□□□ -1.01
CDK5RAP3-237ENST00000585163 KRTAP13-1Q8IUC0 172 aa8.72□□□□□ -1.01
CDK5RAP3-237ENST00000585163 TRAV22A0A0B4J277 110 aa8.72□□□□□ -1.01
CDK5RAP3-237ENST00000585163 CSMD3Q7Z407 3707 aa8.71□□□□□ -1.01
CDK5RAP3-237ENST00000585163 TENM2Q9NT68 2774 aa8.71□□□□□ -1.01
CDK5RAP3-237ENST00000585163 PANO1I0J062 215 aa8.71□□□□□ -1.02
CDK5RAP3-237ENST00000585163 NBDYA0A0U1RRE5 68 aa8.71□□□□□ -1.02
CDK5RAP3-237ENST00000585163 LINC00208Q96KT6 92 aa8.71□□□□□ -1.02
CDK5RAP3-237ENST00000585163 Q6ZRN7 208 aaPredicted RBP8.7□□□□□ -1.02
CDK5RAP3-237ENST00000585163 PRR4Q16378 134 aa8.69□□□□□ -1.02
CDK5RAP3-237ENST00000585163 H3BPC8 53 aa8.68□□□□□ -1.02
CDK5RAP3-237ENST00000585163 H0Y9P7 68 aa8.68□□□□□ -1.02
CDK5RAP3-237ENST00000585163 PLECQ15149 4684 aaKnown RBP8.67□□□□□ -1.02
CDK5RAP3-237ENST00000585163 MDFIQ99750 246 aa8.65□□□□□ -1.02
CDK5RAP3-237ENST00000585163 SPACA4Q8TDM5 124 aa8.64□□□□□ -1.03
CDK5RAP3-237ENST00000585163 MMP24-AS1A0A0U1RRL7 71 aa8.63□□□□□ -1.03
CDK5RAP3-237ENST00000585163 SPANXA2-OT1Q8N9U9 137 aa8.63□□□□□ -1.03
CDK5RAP3-237ENST00000585163 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.63□□□□□ -1.03
CDK5RAP3-237ENST00000585163 NUPR2A6NF83 97 aa8.62□□□□□ -1.03
CDK5RAP3-237ENST00000585163 Q96NJ1 140 aa8.61□□□□□ -1.03
CDK5RAP3-237ENST00000585163 IGLV9-49A0A0B4J1Y8 123 aa8.6□□□□□ -1.03
CDK5RAP3-237ENST00000585163 LINC00483Q53H64 154 aa8.6□□□□□ -1.03
CDK5RAP3-237ENST00000585163 LCA10Q71F78 164 aa8.6□□□□□ -1.03
CDK5RAP3-237ENST00000585163 A8MUN3 132 aa8.59□□□□□ -1.03
CDK5RAP3-237ENST00000585163 PSPHP1O15172 72 aa8.58□□□□□ -1.04
CDK5RAP3-237ENST00000585163 ASB16-AS1Q495Z4 193 aa8.58□□□□□ -1.04
CDK5RAP3-237ENST00000585163 A0A087WTM6 91 aa8.56□□□□□ -1.04
CDK5RAP3-237ENST00000585163 C7orf65Q6ZTY9 151 aa8.56□□□□□ -1.04
CDK5RAP3-237ENST00000585163 A6NN06 94 aa8.55□□□□□ -1.04
CDK5RAP3-237ENST00000585163 MOBPQ13875 183 aa8.55□□□□□ -1.04
CDK5RAP3-237ENST00000585163 VPS13DQ5THJ4 4388 aa8.55□□□□□ -1.04
CDK5RAP3-237ENST00000585163 ATP11AUNQ6ZP68 121 aa8.54□□□□□ -1.04
CDK5RAP3-237ENST00000585163 ZNF706Q9Y5V0 76 aaPredicted RBP8.54□□□□□ -1.04
CDK5RAP3-237ENST00000585163 A8MU10 97 aa8.54□□□□□ -1.04
CDK5RAP3-237ENST00000585163 WWC2-AS2Q96NR7 200 aa8.54□□□□□ -1.04
CDK5RAP3-237ENST00000585163 TP53AIP1Q9HCN2 124 aa8.53□□□□□ -1.04
CDK5RAP3-237ENST00000585163 PSORS1C2Q9UIG4 136 aa8.53□□□□□ -1.04
CDK5RAP3-237ENST00000585163 STARD9Q9P2P6 4700 aa8.53□□□□□ -1.04
CDK5RAP3-237ENST00000585163 IGLV5-52A0A0A0MRZ9 124 aa8.52□□□□□ -1.04
CDK5RAP3-237ENST00000585163 C8orf17Q9NRJ1 99 aa8.52□□□□□ -1.04
CDK5RAP3-237ENST00000585163 HECTD4Q9Y4D8 3996 aa8.52□□□□□ -1.05
CDK5RAP3-237ENST00000585163 RTL8CO15255 209 aa8.5□□□□□ -1.05
CDK5RAP3-237ENST00000585163 IGLV7-46A0A075B6I9 117 aa8.5□□□□□ -1.05
CDK5RAP3-237ENST00000585163 A0A1B0GVX0 72 aa8.49□□□□□ -1.05
CDK5RAP3-237ENST00000585163 Q6ZR54 194 aa8.49□□□□□ -1.05
CDK5RAP3-237ENST00000585163 SPTSSBQ8NFR3 76 aa8.49□□□□□ -1.05
CDK5RAP3-237ENST00000585163 PLAC8Q9NZF1 115 aa8.49□□□□□ -1.05
CDK5RAP3-237ENST00000585163 ZNF861PO60384 105 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms