RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 CLPSL2Q6UWE3 100 aa0.81□□□□□ -2.28
SMCHD1-205ENST00000581383 CYP2G1PQ6ZSU1 146 aa0.81□□□□□ -2.28
SMCHD1-205ENST00000581383 KRTAP19-3Q7Z4W3 81 aa0.81□□□□□ -2.28
SMCHD1-205ENST00000581383 TMEM263Q8WUH6 116 aaKnown RBP0.81□□□□□ -2.28
SMCHD1-205ENST00000581383 SMIM4Q8WVI0 70 aa0.81□□□□□ -2.28
SMCHD1-205ENST00000581383 S100A16Q96FQ6 103 aaKnown RBP0.81□□□□□ -2.28
SMCHD1-205ENST00000581383 MGST2Q99735 147 aa0.81□□□□□ -2.28
SMCHD1-205ENST00000581383 Q9H521 79 aa0.81□□□□□ -2.28
SMCHD1-205ENST00000581383 RPRMQ9NS64 109 aa0.81□□□□□ -2.28
SMCHD1-205ENST00000581383 V9GYH0 126 aa0.81□□□□□ -2.28
SMCHD1-205ENST00000581383 LPAP08519 4548 aa0.81□□□□□ -2.28
SMCHD1-205ENST00000581383 TRAV30A0A087WSZ9 112 aa0.8□□□□□ -2.28
SMCHD1-205ENST00000581383 A0A087WXM4 84 aa0.8□□□□□ -2.28
SMCHD1-205ENST00000581383 SMIM31A0A1B0GVY4 71 aa0.8□□□□□ -2.28
SMCHD1-205ENST00000581383 FAM24AA6NFZ4 105 aa0.8□□□□□ -2.28
SMCHD1-205ENST00000581383 A8MTW9 85 aa0.8□□□□□ -2.28
SMCHD1-205ENST00000581383 PITX3O75364 302 aa0.8□□□□□ -2.28
SMCHD1-205ENST00000581383 SIX6O95475 246 aa0.8□□□□□ -2.28
SMCHD1-205ENST00000581383 IL5P05113 134 aa0.8□□□□□ -2.28
SMCHD1-205ENST00000581383 IGLC2P0DOY2 106 aa0.8□□□□□ -2.28
SMCHD1-205ENST00000581383 ADCYAP1P18509 176 aa0.8□□□□□ -2.28
SMCHD1-205ENST00000581383 FGF7P21781 194 aa0.8□□□□□ -2.28
SMCHD1-205ENST00000581383 UBE2L3P68036 154 aaKnown RBP0.8□□□□□ -2.28
SMCHD1-205ENST00000581383 IQCJQ1A5X6 159 aa0.8□□□□□ -2.28
SMCHD1-205ENST00000581383 ASB16-AS1Q495Z4 193 aa0.8□□□□□ -2.28
SMCHD1-205ENST00000581383 Q86TA4 180 aa0.8□□□□□ -2.28
SMCHD1-205ENST00000581383 TOMM5Q8N4H5 51 aa0.8□□□□□ -2.28
SMCHD1-205ENST00000581383 DEFB104AQ8WTQ1 72 aa0.8□□□□□ -2.28
SMCHD1-205ENST00000581383 TRGV9Q99603 122 aa0.8□□□□□ -2.28
SMCHD1-205ENST00000581383 PSENENQ9NZ42 101 aa0.8□□□□□ -2.28
SMCHD1-205ENST00000581383 FAM236AA0A1B0GUQ0 79 aa0.79□□□□□ -2.28
SMCHD1-205ENST00000581383 FAM236BA0A1B0GV22 79 aa0.79□□□□□ -2.28
SMCHD1-205ENST00000581383 SNRPGP15A8MWD9 76 aa0.79□□□□□ -2.28
SMCHD1-205ENST00000581383 H3BVH4 76 aa0.79□□□□□ -2.28
SMCHD1-205ENST00000581383 SPINK4O60575 86 aa0.79□□□□□ -2.28
SMCHD1-205ENST00000581383 IGLC6P0CF74 106 aa0.79□□□□□ -2.28
SMCHD1-205ENST00000581383 ASIPP42127 132 aa0.79□□□□□ -2.28
SMCHD1-205ENST00000581383 FAM74A4Q5TZK3 123 aa0.79□□□□□ -2.28
SMCHD1-205ENST00000581383 C10orf113Q5VZT2 155 aa0.79□□□□□ -2.28
SMCHD1-205ENST00000581383 LYPD5Q6UWN5 251 aa0.79□□□□□ -2.28
SMCHD1-205ENST00000581383 AGPAT4-IT1Q9H0P7 198 aa0.79□□□□□ -2.28
SMCHD1-205ENST00000581383 SCP2D1Q9UJQ7 156 aa0.79□□□□□ -2.28
SMCHD1-205ENST00000581383 MUC17Q685J3 4493 aa0.79□□□□□ -2.28
SMCHD1-205ENST00000581383 TNCP24821 2201 aa0.79□□□□□ -2.28
SMCHD1-205ENST00000581383 NDUFB6O95139 128 aa0.78□□□□□ -2.28
SMCHD1-205ENST00000581383 MT1HL1P0DM35 61 aa0.78□□□□□ -2.28
SMCHD1-205ENST00000581383 LINC00694P0DN24 101 aa0.78□□□□□ -2.28
SMCHD1-205ENST00000581383 SLC25A6P12236 298 aa0.78□□□□□ -2.28
SMCHD1-205ENST00000581383 EVI2AP22794 236 aa0.78□□□□□ -2.28
SMCHD1-205ENST00000581383 FAUP35544 74 aaKnown RBP0.78□□□□□ -2.28
SMCHD1-205ENST00000581383 MRPS10P82664 201 aaKnown RBP0.78□□□□□ -2.28
SMCHD1-205ENST00000581383 Q6ZQY7 126 aa0.78□□□□□ -2.28
SMCHD1-205ENST00000581383 FAM167A-AS1Q96KT0 104 aa0.78□□□□□ -2.28
SMCHD1-205ENST00000581383 PRO0255Q9UI72 69 aa0.78□□□□□ -2.28
SMCHD1-205ENST00000581383 TRBV30A0A0K0K1B3 111 aa0.77□□□□□ -2.29
SMCHD1-205ENST00000581383 CFDP00746 253 aaPredicted RBP0.77□□□□□ -2.29
SMCHD1-205ENST00000581383 MGPP08493 103 aa0.77□□□□□ -2.29
SMCHD1-205ENST00000581383 SSBP1Q04837 148 aaKnown RBP0.77□□□□□ -2.29
SMCHD1-205ENST00000581383 RHOHQ15669 191 aa0.77□□□□□ -2.29
SMCHD1-205ENST00000581383 ZNF56Q15929 161 aa0.77□□□□□ -2.29
SMCHD1-205ENST00000581383 LINC01556Q5JQF7 62 aa0.77□□□□□ -2.29
SMCHD1-205ENST00000581383 LELP1Q5T871 98 aa0.77□□□□□ -2.29
SMCHD1-205ENST00000581383 CFAP126Q5VTH2 177 aa0.77□□□□□ -2.29
SMCHD1-205ENST00000581383 ATP6V0E2Q8NHE4 81 aa0.77□□□□□ -2.29
SMCHD1-205ENST00000581383 PFDN5Q99471 154 aa0.77□□□□□ -2.29
SMCHD1-205ENST00000581383 NMES1Q9C002 83 aa0.77□□□□□ -2.29
SMCHD1-205ENST00000581383 NPVFQ9HCQ7 196 aa0.77□□□□□ -2.29
SMCHD1-205ENST00000581383 ARL2-SNX15V9GYD0 113 aa0.77□□□□□ -2.29
SMCHD1-205ENST00000581383 USH2AO75445 5202 aa0.77□□□□□ -2.29
SMCHD1-205ENST00000581383 KMT2DO14686 5537 aa0.77□□□□□ -2.29
SMCHD1-205ENST00000581383 SSPOA2VEC9 5147 aa0.76□□□□□ -2.29
SMCHD1-205ENST00000581383 FXYD6-FXYD2A0A087WZ82 144 aa0.76□□□□□ -2.29
SMCHD1-205ENST00000581383 A0A096LNI7 61 aa0.76□□□□□ -2.29
SMCHD1-205ENST00000581383 TRAV21A0A0B4J279 112 aa0.76□□□□□ -2.29
SMCHD1-205ENST00000581383 LOC101927531A0A1B0GV80 90 aa0.76□□□□□ -2.29
SMCHD1-205ENST00000581383 TMEM262E9PQX1 116 aa0.76□□□□□ -2.29
SMCHD1-205ENST00000581383 H3BNG1 76 aa0.76□□□□□ -2.29
SMCHD1-205ENST00000581383 M0R2P5 195 aa0.76□□□□□ -2.29
SMCHD1-205ENST00000581383 ARMS2P0C7Q2 107 aa0.76□□□□□ -2.29
SMCHD1-205ENST00000581383 GCHFRP30047 84 aa0.76□□□□□ -2.29
SMCHD1-205ENST00000581383 CRIP1P50238 77 aa0.76□□□□□ -2.29
SMCHD1-205ENST00000581383 Q5BKY6 102 aa0.76□□□□□ -2.29
SMCHD1-205ENST00000581383 Q6AWC8 147 aa0.76□□□□□ -2.29
SMCHD1-205ENST00000581383 RPL7L1Q6DKI1 246 aaKnown RBP0.76□□□□□ -2.29
SMCHD1-205ENST00000581383 ENHOQ6UWT2 76 aa0.76□□□□□ -2.29
SMCHD1-205ENST00000581383 PPP1R1CQ8WVI7 109 aa0.76□□□□□ -2.29
SMCHD1-205ENST00000581383 DSTQ03001 7570 aaKnown RBP0.76□□□□□ -2.29
SMCHD1-205ENST00000581383 RBAKDNA6NC62 111 aa0.75□□□□□ -2.29
SMCHD1-205ENST00000581383 NAP1L6A6NFF2 107 aa0.75□□□□□ -2.29
SMCHD1-205ENST00000581383 K7ERU9 68 aa0.75□□□□□ -2.29
SMCHD1-205ENST00000581383 MPC2O95563 127 aa0.75□□□□□ -2.29
SMCHD1-205ENST00000581383 NCR2O95944 276 aa0.75□□□□□ -2.29
SMCHD1-205ENST00000581383 UBE2D3P61077 147 aa0.75□□□□□ -2.29
SMCHD1-205ENST00000581383 UBE2D2P62837 147 aa0.75□□□□□ -2.29
SMCHD1-205ENST00000581383 COX6A2Q02221 97 aa0.75□□□□□ -2.29
SMCHD1-205ENST00000581383 TDRG1Q3Y452 100 aa0.75□□□□□ -2.29
SMCHD1-205ENST00000581383 SPATA8Q6RVD6 105 aa0.75□□□□□ -2.29
SMCHD1-205ENST00000581383 FAM213BQ8TBF2 198 aa0.75□□□□□ -2.29
SMCHD1-205ENST00000581383 RPL39LQ96EH5 51 aaKnown RBP0.75□□□□□ -2.29
SMCHD1-205ENST00000581383 DMAC1Q96GE9 116 aa0.75□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms