RNA–Protein interactions for RNA: ENST00000580738.5

NDEL1-209, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-209ENST00000580738 SYS1-DBNDD2H3BUS1 97 aa9.52□□□□□ -0.89
NDEL1-209ENST00000580738 SMIM11BQ8TCY0 68 aa9.52□□□□□ -0.89
NDEL1-209ENST00000580738 FAM236DA0A1B0GTK5 79 aa9.51□□□□□ -0.89
NDEL1-209ENST00000580738 FAM236CP0DP71 79 aa9.51□□□□□ -0.89
NDEL1-209ENST00000580738 KRTAP19-6Q3LI70 58 aa9.51□□□□□ -0.89
NDEL1-209ENST00000580738 LST1O00453 97 aa9.5□□□□□ -0.89
NDEL1-209ENST00000580738 OCIAD2Q56VL3 154 aa9.49□□□□□ -0.89
NDEL1-209ENST00000580738 SLC7A5P1Q8MH63 180 aa9.49□□□□□ -0.89
NDEL1-209ENST00000580738 LINC00846Q9NV44 126 aa9.49□□□□□ -0.89
NDEL1-209ENST00000580738 TRAV13-2A0A0B4J235 113 aa9.47□□□□□ -0.89
NDEL1-209ENST00000580738 KRTAP16-1A8MUX0 517 aa9.47□□□□□ -0.89
NDEL1-209ENST00000580738 LINC01545Q5VT33 79 aa9.47□□□□□ -0.89
NDEL1-209ENST00000580738 SCGB1D4Q6XE38 83 aa9.47□□□□□ -0.89
NDEL1-209ENST00000580738 Q6ZQY7 126 aa9.47□□□□□ -0.89
NDEL1-209ENST00000580738 IFITM1P13164 125 aa9.46□□□□□ -0.9
NDEL1-209ENST00000580738 MUSTN1Q8IVN3 82 aa9.46□□□□□ -0.9
NDEL1-209ENST00000580738 LINC00575Q6W349 94 aa9.45□□□□□ -0.9
NDEL1-209ENST00000580738 KRTAP6-3Q3LI67 103 aa9.44□□□□□ -0.9
NDEL1-209ENST00000580738 COPS9Q8WXC6 57 aa9.44□□□□□ -0.9
NDEL1-209ENST00000580738 MPLKIPQ8TAP9 179 aa9.43□□□□□ -0.9
NDEL1-209ENST00000580738 hADV29S1A0JD25 119 aa9.41□□□□□ -0.9
NDEL1-209ENST00000580738 H3BUT2 72 aa9.4□□□□□ -0.9
NDEL1-209ENST00000580738 VAMP3Q15836 100 aa9.4□□□□□ -0.9
NDEL1-209ENST00000580738 HRES1P13985 223 aa9.39□□□□□ -0.91
NDEL1-209ENST00000580738 PET117Q6UWS5 81 aa9.39□□□□□ -0.91
NDEL1-209ENST00000580738 Q6ZVH6 145 aa9.39□□□□□ -0.91
NDEL1-209ENST00000580738 DSCR10P59022 87 aa9.38□□□□□ -0.91
NDEL1-209ENST00000580738 RBM12B-AS1Q9P1G2 102 aa9.38□□□□□ -0.91
NDEL1-209ENST00000580738 ANKRD39Q53RE8 183 aa9.35□□□□□ -0.91
NDEL1-209ENST00000580738 SS18L2Q9UHA2 77 aa9.35□□□□□ -0.91
NDEL1-209ENST00000580738 SNHG12Q9BXW3 62 aa9.34□□□□□ -0.91
NDEL1-209ENST00000580738 COLCA2A8K830 154 aa9.32□□□□□ -0.92
NDEL1-209ENST00000580738 C3orf79P0CE67 100 aa9.32□□□□□ -0.92
NDEL1-209ENST00000580738 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.32□□□□□ -0.92
NDEL1-209ENST00000580738 NOTCH2NLQ7Z3S9 236 aa9.31□□□□□ -0.92
NDEL1-209ENST00000580738 PPDPFLQ8WWR9 84 aa9.29□□□□□ -0.92
NDEL1-209ENST00000580738 SCGB1D1O95968 90 aa9.28□□□□□ -0.92
NDEL1-209ENST00000580738 A0A087WSZ3 146 aa9.27□□□□□ -0.93
NDEL1-209ENST00000580738 HIST1H2BKO60814 126 aa9.26□□□□□ -0.93
NDEL1-209ENST00000580738 HIST1H2BJP06899 126 aa9.26□□□□□ -0.93
NDEL1-209ENST00000580738 HIST1H2BOP23527 126 aa9.26□□□□□ -0.93
NDEL1-209ENST00000580738 HIST1H2BBP33778 126 aa9.26□□□□□ -0.93
NDEL1-209ENST00000580738 HIST1H2BDP58876 126 aa9.26□□□□□ -0.93
NDEL1-209ENST00000580738 KRTDAPP60985 99 aa9.26□□□□□ -0.93
NDEL1-209ENST00000580738 HIST1H2BCP62807 126 aa9.26□□□□□ -0.93
NDEL1-209ENST00000580738 HIST2H2BEQ16778 126 aa9.26□□□□□ -0.93
NDEL1-209ENST00000580738 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.26□□□□□ -0.93
NDEL1-209ENST00000580738 TEN1Q86WV5 123 aa9.26□□□□□ -0.93
NDEL1-209ENST00000580738 HIST1H2BHQ93079 126 aa9.26□□□□□ -0.93
NDEL1-209ENST00000580738 HIST1H2BNQ99877 126 aa9.26□□□□□ -0.93
NDEL1-209ENST00000580738 HIST1H2BMQ99879 126 aa9.26□□□□□ -0.93
NDEL1-209ENST00000580738 ATOH7Q8N100 152 aa9.25□□□□□ -0.93
NDEL1-209ENST00000580738 LINC00313P59037 77 aa9.24□□□□□ -0.93
NDEL1-209ENST00000580738 SIGMAR1Q99720 223 aa9.23□□□□□ -0.93
NDEL1-209ENST00000580738 NEBP20929 6669 aa9.22□□□□□ -0.93
NDEL1-209ENST00000580738 Q8N9P0 234 aaPredicted RBP9.18□□□□□ -0.94
NDEL1-209ENST00000580738 BVES-AS1Q5T3Y7 98 aa9.17□□□□□ -0.94
NDEL1-209ENST00000580738 NDUFV3P56181 108 aaKnown RBP9.16□□□□□ -0.94
NDEL1-209ENST00000580738 MTURNQ8N3F0 131 aa9.16□□□□□ -0.94
NDEL1-209ENST00000580738 IGKV4-1P06312 121 aa9.14□□□□□ -0.95
NDEL1-209ENST00000580738 A8MWP4 228 aa9.13□□□□□ -0.95
NDEL1-209ENST00000580738 C12orf57Q99622 126 aa9.13□□□□□ -0.95
NDEL1-209ENST00000580738 MUC12Q9UKN1 5478 aa9.12□□□□□ -0.95
NDEL1-209ENST00000580738 A0A1W2PNM2 257 aa9.11□□□□□ -0.95
NDEL1-209ENST00000580738 H3BMG7 143 aa9.1□□□□□ -0.95
NDEL1-209ENST00000580738 DEFB116Q30KQ4 102 aa9.08□□□□□ -0.96
NDEL1-209ENST00000580738 FAM218AQ96MZ4 157 aa9.06□□□□□ -0.96
NDEL1-209ENST00000580738 IGHV6-1A0A0B4J1U7 121 aa9.05□□□□□ -0.96
NDEL1-209ENST00000580738 SPINK7P58062 85 aa9.05□□□□□ -0.96
NDEL1-209ENST00000580738 COA6Q5JTJ3 125 aaKnown RBP9.05□□□□□ -0.96
NDEL1-209ENST00000580738 SNRPEP62304 92 aaKnown RBP9.03□□□□□ -0.96
NDEL1-209ENST00000580738 KRTAP20-1Q3LI63 56 aa9.03□□□□□ -0.96
NDEL1-209ENST00000580738 FABP2P12104 132 aa9.01□□□□□ -0.97
NDEL1-209ENST00000580738 SNCGO76070 127 aa9□□□□□ -0.97
NDEL1-209ENST00000580738 ZCCHC13Q8WW36 166 aaKnown RBP9□□□□□ -0.97
NDEL1-209ENST00000580738 LINC00472Q9H8W2 130 aa9□□□□□ -0.97
NDEL1-209ENST00000580738 TRBV7-4A0A0J9YYF1 115 aa8.97□□□□□ -0.97
NDEL1-209ENST00000580738 H0YGX0 51 aa8.97□□□□□ -0.97
NDEL1-209ENST00000580738 HIST1H4GQ99525 98 aa8.97□□□□□ -0.97
NDEL1-209ENST00000580738 WFDC13Q8IUB5 93 aa8.95□□□□□ -0.98
NDEL1-209ENST00000580738 A0A1B0GV72 72 aa8.93□□□□□ -0.98
NDEL1-209ENST00000580738 ANKRD29Q8N6D5 301 aa8.93□□□□□ -0.98
NDEL1-209ENST00000580738 A0A1B0GVX0 72 aa8.9□□□□□ -0.98
NDEL1-209ENST00000580738 HSBP1L1C9JCN9 74 aa8.9□□□□□ -0.98
NDEL1-209ENST00000580738 C8orf87E5RJ46 101 aa8.9□□□□□ -0.98
NDEL1-209ENST00000580738 RAB37Q96AX2 223 aa8.9□□□□□ -0.98
NDEL1-209ENST00000580738 GHRHP01286 108 aa8.89□□□□□ -0.99
NDEL1-209ENST00000580738 A0A1B0GX51 115 aa8.86□□□□□ -0.99
NDEL1-209ENST00000580738 A6NN06 94 aa8.85□□□□□ -0.99
NDEL1-209ENST00000580738 TRACP01848 142 aa8.85□□□□□ -0.99
NDEL1-209ENST00000580738 CCKP06307 115 aa8.85□□□□□ -0.99
NDEL1-209ENST00000580738 A0A0B4J2C4 111 aa8.82□□□□□ -1
NDEL1-209ENST00000580738 MDN1Q9NU22 5596 aa8.82□□□□□ -1
NDEL1-209ENST00000580738 KMT2DO14686 5537 aa8.8□□□□□ -1
NDEL1-209ENST00000580738 COX8AP10176 69 aa8.78□□□□□ -1
NDEL1-209ENST00000580738 H1FX-AS1Q4G0G2 97 aa8.78□□□□□ -1
NDEL1-209ENST00000580738 HIST1H2BLQ99880 126 aa8.78□□□□□ -1
NDEL1-209ENST00000580738 KRTAP5-9P26371 169 aa8.76□□□□□ -1.01
NDEL1-209ENST00000580738 LYRM7Q5U5X0 104 aa8.76□□□□□ -1.01
NDEL1-209ENST00000580738 ORMDL1Q9P0S3 153 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms