RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 UBE2BP63146 152 aa6.1□□□□□ -1.43
GGA3-209ENST00000580646 DSCR8Q96T75 97 aa6.1□□□□□ -1.43
GGA3-209ENST00000580646 PSORS1C2Q9UIG4 136 aa6.1□□□□□ -1.43
GGA3-209ENST00000580646 S100A7L2Q5SY68 101 aa6.09□□□□□ -1.43
GGA3-209ENST00000580646 ADAMTSL4-AS1Q5T5F5 129 aa6.09□□□□□ -1.43
GGA3-209ENST00000580646 ATP5EP2Q5VTU8 51 aa6.09□□□□□ -1.43
GGA3-209ENST00000580646 LINC00167Q96N53 147 aa6.09□□□□□ -1.43
GGA3-209ENST00000580646 M0R378 163 aa6.08□□□□□ -1.44
GGA3-209ENST00000580646 Q8NDZ9 215 aa6.08□□□□□ -1.44
GGA3-209ENST00000580646 IGLV1-50A0A075B6I6 118 aa6.07□□□□□ -1.44
GGA3-209ENST00000580646 C1orf137Q5JT78 98 aa6.07□□□□□ -1.44
GGA3-209ENST00000580646 KRTAP11-1Q8IUC1 163 aa6.07□□□□□ -1.44
GGA3-209ENST00000580646 LINC00308Q8TCZ7 52 aa6.07□□□□□ -1.44
GGA3-209ENST00000580646 H7C2G1 150 aa6.06□□□□□ -1.44
GGA3-209ENST00000580646 MT1HL1P0DM35 61 aa6.06□□□□□ -1.44
GGA3-209ENST00000580646 SPINK6Q6UWN8 80 aa6.06□□□□□ -1.44
GGA3-209ENST00000580646 SOSTDC1Q6X4U4 206 aa6.06□□□□□ -1.44
GGA3-209ENST00000580646 NDUFC1O43677 76 aa6.05□□□□□ -1.44
GGA3-209ENST00000580646 IGLV7-43P04211 117 aa6.05□□□□□ -1.44
GGA3-209ENST00000580646 LRP2P98164 4655 aa6.05□□□□□ -1.44
GGA3-209ENST00000580646 RPL37AP8A6NKH3 93 aa6.04□□□□□ -1.44
GGA3-209ENST00000580646 EIF4EBP3O60516 100 aaPredicted RBP6.04□□□□□ -1.44
GGA3-209ENST00000580646 DNAL4O96015 105 aa6.04□□□□□ -1.44
GGA3-209ENST00000580646 MUSTN1Q8IVN3 82 aa6.04□□□□□ -1.44
GGA3-209ENST00000580646 SMCR5Q8TEV8 140 aa6.04□□□□□ -1.44
GGA3-209ENST00000580646 IGKV2-28A0A075B6P5 120 aa6.03□□□□□ -1.44
GGA3-209ENST00000580646 PRYO14603 147 aa6.03□□□□□ -1.44
GGA3-209ENST00000580646 NCR3O14931 201 aa6.03□□□□□ -1.44
GGA3-209ENST00000580646 IGKV2D-28P01615 120 aa6.03□□□□□ -1.44
GGA3-209ENST00000580646 KCNQ1DNQ9H478 68 aa6.03□□□□□ -1.44
GGA3-209ENST00000580646 TNXBP22105 4242 aa6.03□□□□□ -1.44
GGA3-209ENST00000580646 ZNF861PO60384 105 aa6.02□□□□□ -1.45
GGA3-209ENST00000580646 IGLV6-57P01721 117 aa6.02□□□□□ -1.45
GGA3-209ENST00000580646 SPRR1AP35321 89 aa6.02□□□□□ -1.45
GGA3-209ENST00000580646 REG3GQ6UW15 175 aa6.02□□□□□ -1.45
GGA3-209ENST00000580646 TRBV10-3A0A0K0K1G6 114 aa6.01□□□□□ -1.45
GGA3-209ENST00000580646 H0Y9J4 135 aa6.01□□□□□ -1.45
GGA3-209ENST00000580646 RPL28P46779 137 aaKnown RBP6.01□□□□□ -1.45
GGA3-209ENST00000580646 CD164Q04900 197 aa6.01□□□□□ -1.45
GGA3-209ENST00000580646 KRTAP13-1Q8IUC0 172 aa6.01□□□□□ -1.45
GGA3-209ENST00000580646 LINC00337Q8N6G1 96 aa6.01□□□□□ -1.45
GGA3-209ENST00000580646 DIRC1Q969H9 104 aa6.01□□□□□ -1.45
GGA3-209ENST00000580646 BRK1Q8WUW1 75 aa6□□□□□ -1.45
GGA3-209ENST00000580646 KRTAP4-16G5E9R7 235 aaPredicted RBP5.99□□□□□ -1.45
GGA3-209ENST00000580646 TRAV23DV6A0A075B6W5 121 aa5.98□□□□□ -1.45
GGA3-209ENST00000580646 UBE2AP49459 152 aa5.98□□□□□ -1.45
GGA3-209ENST00000580646 PMAIP1Q13794 54 aa5.98□□□□□ -1.45
GGA3-209ENST00000580646 CLEC2BQ92478 149 aa5.98□□□□□ -1.45
GGA3-209ENST00000580646 TRAV7A0A075B6U4 112 aa5.97□□□□□ -1.45
GGA3-209ENST00000580646 BAALC-AS2P0C853 105 aa5.97□□□□□ -1.45
GGA3-209ENST00000580646 KRTAP10-8P60410 259 aa5.97□□□□□ -1.45
GGA3-209ENST00000580646 FAM19A1Q7Z5A9 133 aa5.97□□□□□ -1.45
GGA3-209ENST00000580646 CYSTM1Q9H1C7 97 aa5.97□□□□□ -1.45
GGA3-209ENST00000580646 TRAV13-2A0A0B4J235 113 aa5.96□□□□□ -1.46
GGA3-209ENST00000580646 GHRHP01286 108 aa5.96□□□□□ -1.46
GGA3-209ENST00000580646 PRR15Q8IV56 129 aa5.96□□□□□ -1.46
GGA3-209ENST00000580646 TRBV7-6A0A0J9YX20 115 aa5.95□□□□□ -1.46
GGA3-209ENST00000580646 ETDCA0A1B0GVM5 59 aa5.95□□□□□ -1.46
GGA3-209ENST00000580646 ZNF73O43830 326 aaPredicted RBP5.95□□□□□ -1.46
GGA3-209ENST00000580646 PRLHP81277 87 aa5.95□□□□□ -1.46
GGA3-209ENST00000580646 KLKP1Q107X0 134 aa5.95□□□□□ -1.46
GGA3-209ENST00000580646 Q6ZRX8 168 aa5.94□□□□□ -1.46
GGA3-209ENST00000580646 KRTAP1-4P0C5Y4 121 aa5.93□□□□□ -1.46
GGA3-209ENST00000580646 A0A0U1RQV1 116 aa5.92□□□□□ -1.46
GGA3-209ENST00000580646 H7BZZ5 65 aa5.92□□□□□ -1.46
GGA3-209ENST00000580646 RBM3P98179 157 aaKnown RBP5.92□□□□□ -1.46
GGA3-209ENST00000580646 FP248Q71RG6 208 aaPredicted RBP5.92□□□□□ -1.46
GGA3-209ENST00000580646 C20orf197Q8N268 126 aa5.92□□□□□ -1.46
GGA3-209ENST00000580646 KRTAP9-6A0A140TA67 174 aa5.91□□□□□ -1.46
GGA3-209ENST00000580646 OBSCN-AS1Q96MR7 158 aa5.91□□□□□ -1.46
GGA3-209ENST00000580646 HIGD2AQ9BW72 106 aa5.91□□□□□ -1.46
GGA3-209ENST00000580646 KRTAP9-2Q9BYQ4 174 aa5.91□□□□□ -1.46
GGA3-209ENST00000580646 ZNF706Q9Y5V0 76 aaPredicted RBP5.91□□□□□ -1.46
GGA3-209ENST00000580646 IGKV3D-7A0A0C4DH55 119 aa5.9□□□□□ -1.46
GGA3-209ENST00000580646 CCKP06307 115 aa5.9□□□□□ -1.46
GGA3-209ENST00000580646 ELOF1P60002 83 aaKnown RBP5.9□□□□□ -1.46
GGA3-209ENST00000580646 FAM229BQ4G0N7 80 aa5.9□□□□□ -1.46
GGA3-209ENST00000580646 C6orf99Q4VX62 202 aa5.9□□□□□ -1.46
GGA3-209ENST00000580646 Q9BRP9 147 aa5.9□□□□□ -1.46
GGA3-209ENST00000580646 PRR26Q8N8Z3 221 aa5.89□□□□□ -1.47
GGA3-209ENST00000580646 DHRS4-AS1Q9P1J3 65 aa5.89□□□□□ -1.47
GGA3-209ENST00000580646 H0YGX0 51 aa5.88□□□□□ -1.47
GGA3-209ENST00000580646 COX7BP24311 80 aa5.88□□□□□ -1.47
GGA3-209ENST00000580646 SMIM11BQ8TCY0 68 aa5.88□□□□□ -1.47
GGA3-209ENST00000580646 SPRR4Q96PI1 79 aa5.88□□□□□ -1.47
GGA3-209ENST00000580646 JMJD7-PLA2G4BH0Y9G9 81 aa5.87□□□□□ -1.47
GGA3-209ENST00000580646 ERC2-IT1O76042 136 aa5.87□□□□□ -1.47
GGA3-209ENST00000580646 UBL5Q9BZL1 73 aa5.87□□□□□ -1.47
GGA3-209ENST00000580646 LINC00483Q53H64 154 aa5.86□□□□□ -1.47
GGA3-209ENST00000580646 LINC00846Q9NV44 126 aa5.86□□□□□ -1.47
GGA3-209ENST00000580646 FAT4Q6V0I7 4981 aa5.85□□□□□ -1.47
GGA3-209ENST00000580646 A0A087WVE0 104 aa5.84□□□□□ -1.47
GGA3-209ENST00000580646 A0A087X002 238 aa5.84□□□□□ -1.47
GGA3-209ENST00000580646 F8WEM9 126 aa5.84□□□□□ -1.47
GGA3-209ENST00000580646 SPRR1BP22528 89 aa5.83□□□□□ -1.48
GGA3-209ENST00000580646 C14orf132Q9NPU4 83 aa5.82□□□□□ -1.48
GGA3-209ENST00000580646 KRTAP13-2Q52LG2 175 aa5.81□□□□□ -1.48
GGA3-209ENST00000580646 LINC00575Q6W349 94 aa5.81□□□□□ -1.48
GGA3-209ENST00000580646 TYMSOSQ8TAI1 123 aa5.81□□□□□ -1.48
GGA3-209ENST00000580646 ANAPC11Q9NYG5 84 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms