RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 Q6ZVH6 145 aa6.76□□□□□ -1.33
COPS3-214ENST00000577246 C20orf166-AS1Q96NR2 134 aa6.76□□□□□ -1.33
COPS3-214ENST00000577246 FAM236DA0A1B0GTK5 79 aa6.75□□□□□ -1.33
COPS3-214ENST00000577246 LCE2BO14633 110 aa6.75□□□□□ -1.33
COPS3-214ENST00000577246 FAM236CP0DP71 79 aa6.75□□□□□ -1.33
COPS3-214ENST00000577246 SMIM11BQ8TCY0 68 aa6.74□□□□□ -1.33
COPS3-214ENST00000577246 TTTY13Q9BZ97 58 aa6.74□□□□□ -1.33
COPS3-214ENST00000577246 A8MUU9 505 aa6.73□□□□□ -1.33
COPS3-214ENST00000577246 KRTAP10-10P60014 251 aa6.73□□□□□ -1.33
COPS3-214ENST00000577246 OCIAD2Q56VL3 154 aa6.73□□□□□ -1.33
COPS3-214ENST00000577246 LINC01545Q5VT33 79 aa6.73□□□□□ -1.33
COPS3-214ENST00000577246 MACF1Q9UPN3 7388 aaKnown RBP6.72□□□□□ -1.33
COPS3-214ENST00000577246 MT1FP04733 61 aa6.72□□□□□ -1.33
COPS3-214ENST00000577246 PET117Q6UWS5 81 aa6.72□□□□□ -1.33
COPS3-214ENST00000577246 Q6ZQY7 126 aa6.72□□□□□ -1.33
COPS3-214ENST00000577246 SS18L2Q9UHA2 77 aa6.72□□□□□ -1.33
COPS3-214ENST00000577246 LINC00575Q6W349 94 aa6.71□□□□□ -1.34
COPS3-214ENST00000577246 KRTAP9-3Q9BYQ3 159 aa6.71□□□□□ -1.34
COPS3-214ENST00000577246 SYNE2Q8WXH0 6885 aaKnown RBP6.71□□□□□ -1.34
COPS3-214ENST00000577246 hADV29S1A0JD25 119 aa6.7□□□□□ -1.34
COPS3-214ENST00000577246 SCGB1D1O95968 90 aa6.7□□□□□ -1.34
COPS3-214ENST00000577246 RBM12B-AS1Q9P1G2 102 aa6.7□□□□□ -1.34
COPS3-214ENST00000577246 MUSTN1Q8IVN3 82 aa6.69□□□□□ -1.34
COPS3-214ENST00000577246 PPDPFLQ8WWR9 84 aa6.69□□□□□ -1.34
COPS3-214ENST00000577246 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.66□□□□□ -1.34
COPS3-214ENST00000577246 SNHG12Q9BXW3 62 aa6.66□□□□□ -1.34
COPS3-214ENST00000577246 KRTAP19-6Q3LI70 58 aa6.63□□□□□ -1.35
COPS3-214ENST00000577246 H3BUT2 72 aa6.61□□□□□ -1.35
COPS3-214ENST00000577246 C3orf79P0CE67 100 aa6.61□□□□□ -1.35
COPS3-214ENST00000577246 TEN1Q86WV5 123 aa6.61□□□□□ -1.35
COPS3-214ENST00000577246 COLCA2A8K830 154 aa6.6□□□□□ -1.35
COPS3-214ENST00000577246 DSCR10P59022 87 aa6.6□□□□□ -1.35
COPS3-214ENST00000577246 ANKRD39Q53RE8 183 aa6.6□□□□□ -1.35
COPS3-214ENST00000577246 MPLKIPQ8TAP9 179 aa6.6□□□□□ -1.35
COPS3-214ENST00000577246 KRTDAPP60985 99 aa6.59□□□□□ -1.35
COPS3-214ENST00000577246 BVES-AS1Q5T3Y7 98 aa6.59□□□□□ -1.35
COPS3-214ENST00000577246 MTURNQ8N3F0 131 aa6.59□□□□□ -1.35
COPS3-214ENST00000577246 A0A087WSZ3 146 aa6.57□□□□□ -1.36
COPS3-214ENST00000577246 HIST1H2BKO60814 126 aa6.57□□□□□ -1.36
COPS3-214ENST00000577246 HIST1H2BJP06899 126 aa6.57□□□□□ -1.36
COPS3-214ENST00000577246 HRES1P13985 223 aa6.57□□□□□ -1.36
COPS3-214ENST00000577246 HIST1H2BOP23527 126 aa6.57□□□□□ -1.36
COPS3-214ENST00000577246 HIST1H2BBP33778 126 aa6.57□□□□□ -1.36
COPS3-214ENST00000577246 HIST1H2BDP58876 126 aa6.57□□□□□ -1.36
COPS3-214ENST00000577246 LINC00313P59037 77 aa6.57□□□□□ -1.36
COPS3-214ENST00000577246 HIST1H2BCP62807 126 aa6.57□□□□□ -1.36
COPS3-214ENST00000577246 HIST2H2BEQ16778 126 aa6.57□□□□□ -1.36
COPS3-214ENST00000577246 KRTAP6-3Q3LI67 103 aa6.57□□□□□ -1.36
COPS3-214ENST00000577246 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.57□□□□□ -1.36
COPS3-214ENST00000577246 HIST1H2BHQ93079 126 aa6.57□□□□□ -1.36
COPS3-214ENST00000577246 C12orf57Q99622 126 aa6.57□□□□□ -1.36
COPS3-214ENST00000577246 HIST1H2BNQ99877 126 aa6.57□□□□□ -1.36
COPS3-214ENST00000577246 HIST1H2BMQ99879 126 aa6.57□□□□□ -1.36
COPS3-214ENST00000577246 SNCGO76070 127 aa6.56□□□□□ -1.36
COPS3-214ENST00000577246 SIGMAR1Q99720 223 aa6.56□□□□□ -1.36
COPS3-214ENST00000577246 KRTAP16-1A8MUX0 517 aa6.55□□□□□ -1.36
COPS3-214ENST00000577246 SNRPEP62304 92 aaKnown RBP6.53□□□□□ -1.36
COPS3-214ENST00000577246 ATOH7Q8N100 152 aa6.53□□□□□ -1.36
COPS3-214ENST00000577246 NOTCH2NLQ7Z3S9 236 aa6.51□□□□□ -1.37
COPS3-214ENST00000577246 A8MWP4 228 aa6.5□□□□□ -1.37
COPS3-214ENST00000577246 GHRHP01286 108 aa6.5□□□□□ -1.37
COPS3-214ENST00000577246 NDUFV3P56181 108 aaKnown RBP6.5□□□□□ -1.37
COPS3-214ENST00000577246 IGKV4-1P06312 121 aa6.48□□□□□ -1.37
COPS3-214ENST00000577246 H3BMG7 143 aa6.47□□□□□ -1.37
COPS3-214ENST00000577246 COA6Q5JTJ3 125 aaKnown RBP6.46□□□□□ -1.38
COPS3-214ENST00000577246 KRTAP3-3Q9BYR6 98 aa6.46□□□□□ -1.38
COPS3-214ENST00000577246 KRTAP3-2Q9BYR7 98 aa6.46□□□□□ -1.38
COPS3-214ENST00000577246 HSBP1L1C9JCN9 74 aa6.44□□□□□ -1.38
COPS3-214ENST00000577246 H0YGX0 51 aa6.44□□□□□ -1.38
COPS3-214ENST00000577246 HIST1H4GQ99525 98 aa6.42□□□□□ -1.38
COPS3-214ENST00000577246 IGHV6-1A0A0B4J1U7 121 aa6.41□□□□□ -1.38
COPS3-214ENST00000577246 TRBV7-4A0A0J9YYF1 115 aa6.41□□□□□ -1.38
COPS3-214ENST00000577246 A0A1W2PNM2 257 aa6.41□□□□□ -1.38
COPS3-214ENST00000577246 FABP2P12104 132 aa6.41□□□□□ -1.38
COPS3-214ENST00000577246 Q8N9P0 234 aaPredicted RBP6.4□□□□□ -1.38
COPS3-214ENST00000577246 A0A1B0GX51 115 aa6.39□□□□□ -1.39
COPS3-214ENST00000577246 C8orf87E5RJ46 101 aa6.39□□□□□ -1.39
COPS3-214ENST00000577246 SPINK7P58062 85 aa6.39□□□□□ -1.39
COPS3-214ENST00000577246 ANKRD29Q8N6D5 301 aa6.38□□□□□ -1.39
COPS3-214ENST00000577246 RAB37Q96AX2 223 aa6.38□□□□□ -1.39
COPS3-214ENST00000577246 ZCCHC13Q8WW36 166 aaKnown RBP6.37□□□□□ -1.39
COPS3-214ENST00000577246 FAM218AQ96MZ4 157 aa6.37□□□□□ -1.39
COPS3-214ENST00000577246 DEFB116Q30KQ4 102 aa6.36□□□□□ -1.39
COPS3-214ENST00000577246 LINC00472Q9H8W2 130 aa6.36□□□□□ -1.39
COPS3-214ENST00000577246 NEBP20929 6669 aa6.34□□□□□ -1.39
COPS3-214ENST00000577246 A0A1B0GVX0 72 aa6.33□□□□□ -1.4
COPS3-214ENST00000577246 H3BQ85 93 aa6.33□□□□□ -1.4
COPS3-214ENST00000577246 TRACP01848 142 aa6.33□□□□□ -1.4
COPS3-214ENST00000577246 WFDC13Q8IUB5 93 aa6.33□□□□□ -1.4
COPS3-214ENST00000577246 A0A0B4J2C4 111 aa6.32□□□□□ -1.4
COPS3-214ENST00000577246 CCKP06307 115 aa6.3□□□□□ -1.4
COPS3-214ENST00000577246 DNAL4O96015 105 aa6.29□□□□□ -1.4
COPS3-214ENST00000577246 A0A1B0GV72 72 aa6.28□□□□□ -1.4
COPS3-214ENST00000577246 S100A2P29034 98 aa6.28□□□□□ -1.4
COPS3-214ENST00000577246 KRTAP20-1Q3LI63 56 aa6.28□□□□□ -1.4
COPS3-214ENST00000577246 ORMDL1Q9P0S3 153 aa6.28□□□□□ -1.4
COPS3-214ENST00000577246 COX8AP10176 69 aa6.27□□□□□ -1.41
COPS3-214ENST00000577246 LYRM7Q5U5X0 104 aa6.27□□□□□ -1.41
COPS3-214ENST00000577246 MUC12Q9UKN1 5478 aa6.26□□□□□ -1.41
COPS3-214ENST00000577246 J3KT08 172 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms