RNA–Protein interactions for RNA: ENST00000571457.1

CHMP6-202, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-202ENST00000571457 FABP4P15090 132 aa5.63□□□□□ -1.51
CHMP6-202ENST00000571457 COPS9Q8WXC6 57 aa5.63□□□□□ -1.51
CHMP6-202ENST00000571457 RBM12B-AS1Q9P1G2 102 aa5.63□□□□□ -1.51
CHMP6-202ENST00000571457 NEBP20929 6669 aa5.63□□□□□ -1.51
CHMP6-202ENST00000571457 TRAV13-2A0A0B4J235 113 aa5.62□□□□□ -1.51
CHMP6-202ENST00000571457 SERF1AO75920 110 aa5.62□□□□□ -1.51
CHMP6-202ENST00000571457 SLC7A5P1Q8MH63 180 aa5.6□□□□□ -1.51
CHMP6-202ENST00000571457 SNAPINO95295 136 aa5.59□□□□□ -1.51
CHMP6-202ENST00000571457 APOC3P02656 99 aa5.59□□□□□ -1.51
CHMP6-202ENST00000571457 OCIAD2Q56VL3 154 aa5.59□□□□□ -1.51
CHMP6-202ENST00000571457 LINC00310P59036 64 aa5.58□□□□□ -1.52
CHMP6-202ENST00000571457 SS18L2Q9UHA2 77 aa5.58□□□□□ -1.52
CHMP6-202ENST00000571457 IFITM1P13164 125 aa5.57□□□□□ -1.52
CHMP6-202ENST00000571457 VAMP3Q15836 100 aa5.57□□□□□ -1.52
CHMP6-202ENST00000571457 NDUFA5Q16718 116 aa5.57□□□□□ -1.52
CHMP6-202ENST00000571457 SVBPQ8N300 66 aa5.57□□□□□ -1.52
CHMP6-202ENST00000571457 MPLKIPQ8TAP9 179 aa5.57□□□□□ -1.52
CHMP6-202ENST00000571457 YPEL4Q96NS1 127 aa5.57□□□□□ -1.52
CHMP6-202ENST00000571457 SCGB1D4Q6XE38 83 aa5.55□□□□□ -1.52
CHMP6-202ENST00000571457 Q6ZQY7 126 aa5.55□□□□□ -1.52
CHMP6-202ENST00000571457 SMIM11BQ8TCY0 68 aa5.55□□□□□ -1.52
CHMP6-202ENST00000571457 SCGB1D1O95968 90 aa5.54□□□□□ -1.52
CHMP6-202ENST00000571457 HRES1P13985 223 aa5.54□□□□□ -1.52
CHMP6-202ENST00000571457 Q6ZVH6 145 aa5.54□□□□□ -1.52
CHMP6-202ENST00000571457 MTURNQ8N3F0 131 aa5.54□□□□□ -1.52
CHMP6-202ENST00000571457 hADV29S1A0JD25 119 aa5.53□□□□□ -1.52
CHMP6-202ENST00000571457 KRTAP16-1A8MUX0 517 aa5.53□□□□□ -1.52
CHMP6-202ENST00000571457 TRGC2P03986 189 aa5.53□□□□□ -1.52
CHMP6-202ENST00000571457 LINC00575Q6W349 94 aa5.53□□□□□ -1.52
CHMP6-202ENST00000571457 TTTY13Q9BZ97 58 aa5.53□□□□□ -1.52
CHMP6-202ENST00000571457 SYS1-DBNDD2H3BUS1 97 aa5.52□□□□□ -1.53
CHMP6-202ENST00000571457 GHRHP01286 108 aa5.52□□□□□ -1.53
CHMP6-202ENST00000571457 PPDPFLQ8WWR9 84 aa5.52□□□□□ -1.53
CHMP6-202ENST00000571457 SNHG12Q9BXW3 62 aa5.52□□□□□ -1.53
CHMP6-202ENST00000571457 DSCR10P59022 87 aa5.51□□□□□ -1.53
CHMP6-202ENST00000571457 MUC12Q9UKN1 5478 aa5.5□□□□□ -1.53
CHMP6-202ENST00000571457 MUSTN1Q8IVN3 82 aa5.5□□□□□ -1.53
CHMP6-202ENST00000571457 ANKRD39Q53RE8 183 aa5.49□□□□□ -1.53
CHMP6-202ENST00000571457 LINC01545Q5VT33 79 aa5.49□□□□□ -1.53
CHMP6-202ENST00000571457 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.49□□□□□ -1.53
CHMP6-202ENST00000571457 NOTCH2NLQ7Z3S9 236 aa5.49□□□□□ -1.53
CHMP6-202ENST00000571457 A8MWP4 228 aa5.48□□□□□ -1.53
CHMP6-202ENST00000571457 H3BUT2 72 aa5.48□□□□□ -1.53
CHMP6-202ENST00000571457 KRTAP20-1Q3LI63 56 aa5.48□□□□□ -1.53
CHMP6-202ENST00000571457 TEN1Q86WV5 123 aa5.48□□□□□ -1.53
CHMP6-202ENST00000571457 LINC00313P59037 77 aa5.47□□□□□ -1.53
CHMP6-202ENST00000571457 PET117Q6UWS5 81 aa5.47□□□□□ -1.53
CHMP6-202ENST00000571457 SIGMAR1Q99720 223 aa5.46□□□□□ -1.54
CHMP6-202ENST00000571457 A0A087WSZ3 146 aa5.45□□□□□ -1.54
CHMP6-202ENST00000571457 COLCA2A8K830 154 aa5.44□□□□□ -1.54
CHMP6-202ENST00000571457 Q8N9P0 234 aaPredicted RBP5.44□□□□□ -1.54
CHMP6-202ENST00000571457 TMEM238LA0A1B0GVL6 79 aa5.42□□□□□ -1.54
CHMP6-202ENST00000571457 BVES-AS1Q5T3Y7 98 aa5.41□□□□□ -1.54
CHMP6-202ENST00000571457 C12orf57Q99622 126 aa5.41□□□□□ -1.54
CHMP6-202ENST00000571457 SNCGO76070 127 aa5.38□□□□□ -1.55
CHMP6-202ENST00000571457 IGKV4-1P06312 121 aa5.38□□□□□ -1.55
CHMP6-202ENST00000571457 C3orf79P0CE67 100 aa5.38□□□□□ -1.55
CHMP6-202ENST00000571457 NDUFV3P56181 108 aaKnown RBP5.37□□□□□ -1.55
CHMP6-202ENST00000571457 SPINK7P58062 85 aa5.35□□□□□ -1.55
CHMP6-202ENST00000571457 KRTDAPP60985 99 aa5.35□□□□□ -1.55
CHMP6-202ENST00000571457 MDN1Q9NU22 5596 aa5.35□□□□□ -1.55
CHMP6-202ENST00000571457 H3BMG7 143 aa5.34□□□□□ -1.55
CHMP6-202ENST00000571457 IGHV6-1A0A0B4J1U7 121 aa5.33□□□□□ -1.56
CHMP6-202ENST00000571457 A6NN06 94 aa5.32□□□□□ -1.56
CHMP6-202ENST00000571457 HIST1H2BKO60814 126 aa5.32□□□□□ -1.56
CHMP6-202ENST00000571457 HIST1H2BJP06899 126 aa5.32□□□□□ -1.56
CHMP6-202ENST00000571457 HIST1H2BOP23527 126 aa5.32□□□□□ -1.56
CHMP6-202ENST00000571457 HIST1H2BBP33778 126 aa5.32□□□□□ -1.56
CHMP6-202ENST00000571457 HIST1H2BDP58876 126 aa5.32□□□□□ -1.56
CHMP6-202ENST00000571457 HIST1H2BCP62807 126 aa5.32□□□□□ -1.56
CHMP6-202ENST00000571457 HIST2H2BEQ16778 126 aa5.32□□□□□ -1.56
CHMP6-202ENST00000571457 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.32□□□□□ -1.56
CHMP6-202ENST00000571457 ZCCHC13Q8WW36 166 aaKnown RBP5.32□□□□□ -1.56
CHMP6-202ENST00000571457 HIST1H2BHQ93079 126 aa5.32□□□□□ -1.56
CHMP6-202ENST00000571457 HIST1H2BNQ99877 126 aa5.32□□□□□ -1.56
CHMP6-202ENST00000571457 HIST1H2BMQ99879 126 aa5.32□□□□□ -1.56
CHMP6-202ENST00000571457 KMT2DO14686 5537 aa5.31□□□□□ -1.56
CHMP6-202ENST00000571457 A0A1W2PNM2 257 aa5.31□□□□□ -1.56
CHMP6-202ENST00000571457 ATOH7Q8N100 152 aa5.31□□□□□ -1.56
CHMP6-202ENST00000571457 SNRPEP62304 92 aaKnown RBP5.3□□□□□ -1.56
CHMP6-202ENST00000571457 WFDC13Q8IUB5 93 aa5.3□□□□□ -1.56
CHMP6-202ENST00000571457 TRBV7-4A0A0J9YYF1 115 aa5.29□□□□□ -1.56
CHMP6-202ENST00000571457 C8orf87E5RJ46 101 aa5.29□□□□□ -1.56
CHMP6-202ENST00000571457 H0YGX0 51 aa5.28□□□□□ -1.56
CHMP6-202ENST00000571457 FABP2P12104 132 aa5.28□□□□□ -1.56
CHMP6-202ENST00000571457 DEFB116Q30KQ4 102 aa5.28□□□□□ -1.56
CHMP6-202ENST00000571457 FAM218AQ96MZ4 157 aa5.28□□□□□ -1.56
CHMP6-202ENST00000571457 LINC00472Q9H8W2 130 aa5.28□□□□□ -1.56
CHMP6-202ENST00000571457 RAB37Q96AX2 223 aa5.27□□□□□ -1.57
CHMP6-202ENST00000571457 KRTAP5-9P26371 169 aa5.26□□□□□ -1.57
CHMP6-202ENST00000571457 ANKRD29Q8N6D5 301 aa5.26□□□□□ -1.57
CHMP6-202ENST00000571457 A0A1B0GVX0 72 aa5.25□□□□□ -1.57
CHMP6-202ENST00000571457 KRTAP2-3P0C7H8 128 aa5.24□□□□□ -1.57
CHMP6-202ENST00000571457 KRTAP2-4Q9BYR9 128 aa5.24□□□□□ -1.57
CHMP6-202ENST00000571457 A0A1B0GX51 115 aa5.23□□□□□ -1.57
CHMP6-202ENST00000571457 HIST1H4GQ99525 98 aa5.23□□□□□ -1.57
CHMP6-202ENST00000571457 H1FX-AS1Q4G0G2 97 aa5.22□□□□□ -1.57
CHMP6-202ENST00000571457 COA6Q5JTJ3 125 aaKnown RBP5.22□□□□□ -1.57
CHMP6-202ENST00000571457 HSBP1L1C9JCN9 74 aa5.21□□□□□ -1.58
CHMP6-202ENST00000571457 TRACP01848 142 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms