RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 TCL1BO95988 128 aa8.31□□□□□ -1.08
HERPUD1-215ENST00000568676 IGLV5-48A0A075B6I7 105 aa8.3□□□□□ -1.08
HERPUD1-215ENST00000568676 A0A1B0GWB2 263 aa8.29□□□□□ -1.08
HERPUD1-215ENST00000568676 MUSTN1Q8IVN3 82 aa8.27□□□□□ -1.09
HERPUD1-215ENST00000568676 TMA7Q9Y2S6 64 aaKnown RBP8.27□□□□□ -1.09
HERPUD1-215ENST00000568676 A4D1N5 150 aa8.26□□□□□ -1.09
HERPUD1-215ENST00000568676 KRTAP9-7A8MTY7 169 aa8.26□□□□□ -1.09
HERPUD1-215ENST00000568676 COX8AP10176 69 aa8.26□□□□□ -1.09
HERPUD1-215ENST00000568676 VAMP8Q9BV40 100 aa8.26□□□□□ -1.09
HERPUD1-215ENST00000568676 CFC1P0CG37 223 aa8.25□□□□□ -1.09
HERPUD1-215ENST00000568676 NHP2Q9NX24 153 aaKnown RBP8.25□□□□□ -1.09
HERPUD1-215ENST00000568676 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.24□□□□□ -1.09
HERPUD1-215ENST00000568676 DLEU1O43261 78 aa8.24□□□□□ -1.09
HERPUD1-215ENST00000568676 SPATA45Q537H7 98 aa8.24□□□□□ -1.09
HERPUD1-215ENST00000568676 PAM16Q9Y3D7 125 aa8.24□□□□□ -1.09
HERPUD1-215ENST00000568676 TRAV13-2A0A0B4J235 113 aa8.23□□□□□ -1.09
HERPUD1-215ENST00000568676 ATP11AUNQ6ZP68 121 aa8.23□□□□□ -1.09
HERPUD1-215ENST00000568676 A6NDN8 102 aa8.22□□□□□ -1.09
HERPUD1-215ENST00000568676 HIST1H4GQ99525 98 aa8.21□□□□□ -1.1
HERPUD1-215ENST00000568676 A0A0G2JQZ4 141 aa8.2□□□□□ -1.1
HERPUD1-215ENST00000568676 Q6Q795 121 aa8.2□□□□□ -1.1
HERPUD1-215ENST00000568676 Q75L30 129 aa8.2□□□□□ -1.1
HERPUD1-215ENST00000568676 C14orf144Q96I85 54 aa8.2□□□□□ -1.1
HERPUD1-215ENST00000568676 F8WEM9 126 aa8.19□□□□□ -1.1
HERPUD1-215ENST00000568676 HIGD1BQ9P298 99 aa8.18□□□□□ -1.1
HERPUD1-215ENST00000568676 PYY3Q5JQD4 70 aa8.17□□□□□ -1.1
HERPUD1-215ENST00000568676 Q6JHZ5 121 aa8.16□□□□□ -1.1
HERPUD1-215ENST00000568676 TRBV7-7A0A0K0K1E9 115 aa8.13□□□□□ -1.11
HERPUD1-215ENST00000568676 VAMP3Q15836 100 aa8.13□□□□□ -1.11
HERPUD1-215ENST00000568676 CLEC2BQ92478 149 aa8.13□□□□□ -1.11
HERPUD1-215ENST00000568676 OBSCN-AS1Q96MR7 158 aa8.13□□□□□ -1.11
HERPUD1-215ENST00000568676 SMIM11BQ8TCY0 68 aa8.12□□□□□ -1.11
HERPUD1-215ENST00000568676 KRTAP9-8Q9BYQ0 159 aa8.12□□□□□ -1.11
HERPUD1-215ENST00000568676 C2orf91Q6ZV80 131 aa8.1□□□□□ -1.11
HERPUD1-215ENST00000568676 TMEM238LA0A1B0GVL6 79 aa8.09□□□□□ -1.11
HERPUD1-215ENST00000568676 A6NJY4 79 aa8.09□□□□□ -1.11
HERPUD1-215ENST00000568676 RAB37Q96AX2 223 aa8.09□□□□□ -1.11
HERPUD1-215ENST00000568676 C12orf57Q99622 126 aa8.09□□□□□ -1.11
HERPUD1-215ENST00000568676 TRBV20-1A0A075B6N2 111 aa8.08□□□□□ -1.12
HERPUD1-215ENST00000568676 CEND1Q8N111 149 aa8.08□□□□□ -1.12
HERPUD1-215ENST00000568676 IGFL1Q6UW32 110 aa8.07□□□□□ -1.12
HERPUD1-215ENST00000568676 A0A0B4J2C4 111 aa8.06□□□□□ -1.12
HERPUD1-215ENST00000568676 OCIAD2Q56VL3 154 aa8.06□□□□□ -1.12
HERPUD1-215ENST00000568676 BVES-AS1Q5T3Y7 98 aa8.06□□□□□ -1.12
HERPUD1-215ENST00000568676 LINC00575Q6W349 94 aa8.06□□□□□ -1.12
HERPUD1-215ENST00000568676 UQCR10Q9UDW1 63 aa8.06□□□□□ -1.12
HERPUD1-215ENST00000568676 LST1O00453 97 aa8.05□□□□□ -1.12
HERPUD1-215ENST00000568676 Q6ZQY7 126 aa8.05□□□□□ -1.12
HERPUD1-215ENST00000568676 Q96NJ1 140 aa8.05□□□□□ -1.12
HERPUD1-215ENST00000568676 SSPOA2VEC9 5147 aa8.05□□□□□ -1.12
HERPUD1-215ENST00000568676 USH2AO75445 5202 aa8.04□□□□□ -1.12
HERPUD1-215ENST00000568676 hADV29S1A0JD25 119 aa8.04□□□□□ -1.12
HERPUD1-215ENST00000568676 HSD52Q0P140 79 aa8.04□□□□□ -1.12
HERPUD1-215ENST00000568676 PPDPFLQ8WWR9 84 aa8.04□□□□□ -1.12
HERPUD1-215ENST00000568676 C20orf166-AS1Q96NR2 134 aa8.04□□□□□ -1.12
HERPUD1-215ENST00000568676 SNCGO76070 127 aa8.02□□□□□ -1.13
HERPUD1-215ENST00000568676 SS18L2Q9UHA2 77 aa8.02□□□□□ -1.13
HERPUD1-215ENST00000568676 PRO1854Q9UHT4 67 aa8.01□□□□□ -1.13
HERPUD1-215ENST00000568676 A8MUU9 505 aa8□□□□□ -1.13
HERPUD1-215ENST00000568676 SMIM6P0DI80 62 aa8□□□□□ -1.13
HERPUD1-215ENST00000568676 FXYD2P54710 66 aa8□□□□□ -1.13
HERPUD1-215ENST00000568676 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8□□□□□ -1.13
HERPUD1-215ENST00000568676 H0YGX0 51 aa7.99□□□□□ -1.13
HERPUD1-215ENST00000568676 SNHG12Q9BXW3 62 aa7.97□□□□□ -1.13
HERPUD1-215ENST00000568676 MT2AP02795 61 aa7.95□□□□□ -1.14
HERPUD1-215ENST00000568676 FCGBPQ9Y6R7 5405 aaPredicted RBP7.95□□□□□ -1.14
HERPUD1-215ENST00000568676 KRTAP19-1Q8IUB9 90 aa7.93□□□□□ -1.14
HERPUD1-215ENST00000568676 A0A1B0GX51 115 aa7.92□□□□□ -1.14
HERPUD1-215ENST00000568676 GHRHP01286 108 aa7.92□□□□□ -1.14
HERPUD1-215ENST00000568676 TEN1Q86WV5 123 aa7.92□□□□□ -1.14
HERPUD1-215ENST00000568676 FAM236DA0A1B0GTK5 79 aa7.91□□□□□ -1.14
HERPUD1-215ENST00000568676 COX6CP09669 75 aa7.91□□□□□ -1.14
HERPUD1-215ENST00000568676 FAM236CP0DP71 79 aa7.91□□□□□ -1.14
HERPUD1-215ENST00000568676 H3BUT2 72 aa7.9□□□□□ -1.14
HERPUD1-215ENST00000568676 LCE2BO14633 110 aa7.9□□□□□ -1.14
HERPUD1-215ENST00000568676 PSMB2P49721 201 aa7.9□□□□□ -1.14
HERPUD1-215ENST00000568676 TSTD3H0UI37 97 aa7.89□□□□□ -1.15
HERPUD1-215ENST00000568676 K7ERJ3 54 aa7.89□□□□□ -1.15
HERPUD1-215ENST00000568676 M0R143 59 aa7.89□□□□□ -1.15
HERPUD1-215ENST00000568676 TRIAP1O43715 76 aa7.89□□□□□ -1.15
HERPUD1-215ENST00000568676 LINC00846Q9NV44 126 aa7.89□□□□□ -1.15
HERPUD1-215ENST00000568676 RBM12B-AS1Q9P1G2 102 aa7.89□□□□□ -1.15
HERPUD1-215ENST00000568676 LOC105371267A0A1B0GV96 52 aa7.88□□□□□ -1.15
HERPUD1-215ENST00000568676 MT1FP04733 61 aa7.88□□□□□ -1.15
HERPUD1-215ENST00000568676 KRTAP10-10P60014 251 aa7.87□□□□□ -1.15
HERPUD1-215ENST00000568676 FAM218AQ96MZ4 157 aa7.87□□□□□ -1.15
HERPUD1-215ENST00000568676 KRTAP9-3Q9BYQ3 159 aa7.87□□□□□ -1.15
HERPUD1-215ENST00000568676 A0A087WSZ3 146 aa7.85□□□□□ -1.15
HERPUD1-215ENST00000568676 DNAL4O96015 105 aa7.85□□□□□ -1.15
HERPUD1-215ENST00000568676 MPLKIPQ8TAP9 179 aa7.84□□□□□ -1.15
HERPUD1-215ENST00000568676 H3BQ85 93 aa7.83□□□□□ -1.16
HERPUD1-215ENST00000568676 SCGB1C2P0DMR2 95 aa7.83□□□□□ -1.16
HERPUD1-215ENST00000568676 DSCR10P59022 87 aa7.83□□□□□ -1.16
HERPUD1-215ENST00000568676 NDUFV3P56181 108 aaKnown RBP7.82□□□□□ -1.16
HERPUD1-215ENST00000568676 LINC00313P59037 77 aa7.82□□□□□ -1.16
HERPUD1-215ENST00000568676 KRTAP16-1A8MUX0 517 aa7.8□□□□□ -1.16
HERPUD1-215ENST00000568676 FABP2P12104 132 aa7.8□□□□□ -1.16
HERPUD1-215ENST00000568676 HRES1P13985 223 aa7.8□□□□□ -1.16
HERPUD1-215ENST00000568676 ORMDL1Q9P0S3 153 aa7.8□□□□□ -1.16
HERPUD1-215ENST00000568676 SIGMAR1Q99720 223 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms