RNA–Protein interactions for RNA: ENST00000566612.5

CDH1-210, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 4,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-210ENST00000566612 MOBPQ13875 183 aa7.42□□□□□ -1.22
CDH1-210ENST00000566612 H0Y9P7 68 aa7.41□□□□□ -1.22
CDH1-210ENST00000566612 PCOTHQ58A44 107 aa7.41□□□□□ -1.22
CDH1-210ENST00000566612 A0A0U1RQV1 116 aa7.4□□□□□ -1.22
CDH1-210ENST00000566612 A0A1B0GW54 56 aa7.4□□□□□ -1.22
CDH1-210ENST00000566612 C4orf26Q17RF5 130 aa7.4□□□□□ -1.22
CDH1-210ENST00000566612 APLNQ9ULZ1 77 aa7.4□□□□□ -1.22
CDH1-210ENST00000566612 RTL8CO15255 209 aa7.4□□□□□ -1.23
CDH1-210ENST00000566612 RPS28P62857 69 aaKnown RBP7.39□□□□□ -1.23
CDH1-210ENST00000566612 C9orf163Q8N9P6 203 aa7.39□□□□□ -1.23
CDH1-210ENST00000566612 CYSTM1Q9H1C7 97 aa7.39□□□□□ -1.23
CDH1-210ENST00000566612 IGLV5-48A0A075B6I7 105 aa7.37□□□□□ -1.23
CDH1-210ENST00000566612 CHKB-CPT1BH3BT56 60 aa7.37□□□□□ -1.23
CDH1-210ENST00000566612 KRTAP1-5Q9BYS1 174 aa7.36□□□□□ -1.23
CDH1-210ENST00000566612 ZNF469Q96JG9 3925 aaPredicted RBP7.36□□□□□ -1.23
CDH1-210ENST00000566612 H7BZZ5 65 aa7.36□□□□□ -1.23
CDH1-210ENST00000566612 ANAPC11Q9NYG5 84 aa7.36□□□□□ -1.23
CDH1-210ENST00000566612 CNBPP62633 177 aaKnown RBP7.35□□□□□ -1.23
CDH1-210ENST00000566612 KLKP1Q107X0 134 aa7.35□□□□□ -1.23
CDH1-210ENST00000566612 C1orf64Q8NEQ6 169 aa7.34□□□□□ -1.23
CDH1-210ENST00000566612 RETNLBQ9BQ08 111 aa7.34□□□□□ -1.23
CDH1-210ENST00000566612 IGLV5-37A0A075B6J1 123 aa7.34□□□□□ -1.23
CDH1-210ENST00000566612 PKD1L1Q8TDX9 2849 aa7.33□□□□□ -1.24
CDH1-210ENST00000566612 PSPHP1O15172 72 aa7.33□□□□□ -1.24
CDH1-210ENST00000566612 hDV103S1A0JD37 113 aa7.33□□□□□ -1.24
CDH1-210ENST00000566612 A0A087WTM6 91 aa7.32□□□□□ -1.24
CDH1-210ENST00000566612 SPTSSBQ8NFR3 76 aa7.29□□□□□ -1.24
CDH1-210ENST00000566612 SPRR1AP35321 89 aa7.29□□□□□ -1.24
CDH1-210ENST00000566612 A8MWP4 228 aa7.28□□□□□ -1.24
CDH1-210ENST00000566612 DSCR10P59022 87 aa7.27□□□□□ -1.25
CDH1-210ENST00000566612 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.27□□□□□ -1.25
CDH1-210ENST00000566612 PRR15Q8IV56 129 aa7.26□□□□□ -1.25
CDH1-210ENST00000566612 PSORS1C2Q9UIG4 136 aa7.26□□□□□ -1.25
CDH1-210ENST00000566612 OCR1Q9BZK8 76 aa7.25□□□□□ -1.25
CDH1-210ENST00000566612 TRAV22A0A0B4J277 110 aa7.25□□□□□ -1.25
CDH1-210ENST00000566612 SPRR4Q96PI1 79 aa7.25□□□□□ -1.25
CDH1-210ENST00000566612 TRRAPQ9Y4A5 3859 aa7.25□□□□□ -1.25
CDH1-210ENST00000566612 SPACA4Q8TDM5 124 aa7.23□□□□□ -1.25
CDH1-210ENST00000566612 PRR15LQ9BU68 103 aa7.23□□□□□ -1.25
CDH1-210ENST00000566612 V9GYY9 64 aa7.23□□□□□ -1.25
CDH1-210ENST00000566612 A6NED7 52 aa7.23□□□□□ -1.25
CDH1-210ENST00000566612 ZNF861PO60384 105 aa7.23□□□□□ -1.25
CDH1-210ENST00000566612 TENM2Q9NT68 2774 aa7.21□□□□□ -1.26
CDH1-210ENST00000566612 KRTAP4-16G5E9R7 235 aaPredicted RBP7.2□□□□□ -1.26
CDH1-210ENST00000566612 TP53AIP1Q9HCN2 124 aa7.19□□□□□ -1.26
CDH1-210ENST00000566612 KRTAP7-1Q8IUC3 87 aa7.18□□□□□ -1.26
CDH1-210ENST00000566612 PANO1I0J062 215 aa7.17□□□□□ -1.26
CDH1-210ENST00000566612 TNP2Q05952 138 aa7.17□□□□□ -1.26
CDH1-210ENST00000566612 C8orf17Q9NRJ1 99 aa7.16□□□□□ -1.26
CDH1-210ENST00000566612 WWC2-AS2Q96NR7 200 aa7.16□□□□□ -1.26
CDH1-210ENST00000566612 IGKV2D-30A0A075B6S6 120 aa7.15□□□□□ -1.26
CDH1-210ENST00000566612 IGKV2-30P06310 120 aa7.15□□□□□ -1.26
CDH1-210ENST00000566612 SVIPQ8NHG7 77 aa7.15□□□□□ -1.26
CDH1-210ENST00000566612 MRPL34Q9BQ48 92 aaKnown RBP7.14□□□□□ -1.27
CDH1-210ENST00000566612 H3BPC8 53 aa7.14□□□□□ -1.27
CDH1-210ENST00000566612 IGLV7-43P04211 117 aa7.13□□□□□ -1.27
CDH1-210ENST00000566612 A0A1B0GVX0 72 aa7.13□□□□□ -1.27
CDH1-210ENST00000566612 SPAG11AQ6PDA7 123 aa7.13□□□□□ -1.27
CDH1-210ENST00000566612 KRTAP11-1Q8IUC1 163 aa7.13□□□□□ -1.27
CDH1-210ENST00000566612 LINC00336Q6ZUF6 198 aa7.12□□□□□ -1.27
CDH1-210ENST00000566612 OXTP01178 125 aa7.12□□□□□ -1.27
CDH1-210ENST00000566612 PRO0628Q9UI54 55 aa7.12□□□□□ -1.27
CDH1-210ENST00000566612 LINC00313P59037 77 aa7.12□□□□□ -1.27
CDH1-210ENST00000566612 ANK3Q12955 4377 aaKnown RBP7.12□□□□□ -1.27
CDH1-210ENST00000566612 PLA2G1BP04054 148 aaKnown RBP7.11□□□□□ -1.27
CDH1-210ENST00000566612 C1orf195Q5TG92 126 aa7.11□□□□□ -1.27
CDH1-210ENST00000566612 SPINK1P00995 79 aa7.1□□□□□ -1.27
CDH1-210ENST00000566612 A8MUN3 132 aa7.1□□□□□ -1.27
CDH1-210ENST00000566612 TYMSOSQ8TAI1 123 aa7.1□□□□□ -1.27
CDH1-210ENST00000566612 LIMD2Q9BT23 127 aa7.1□□□□□ -1.27
CDH1-210ENST00000566612 AKAP9Q99996 3911 aa7.08□□□□□ -1.28
CDH1-210ENST00000566612 PMAIP1Q13794 54 aa7.08□□□□□ -1.28
CDH1-210ENST00000566612 TGP01266 2768 aa7.07□□□□□ -1.28
CDH1-210ENST00000566612 SMR3BP02814 79 aaPredicted RBP7.07□□□□□ -1.28
CDH1-210ENST00000566612 SEC61GP60059 68 aa7.07□□□□□ -1.28
CDH1-210ENST00000566612 SSBP3-AS1Q7Z2R9 100 aa7.07□□□□□ -1.28
CDH1-210ENST00000566612 IGLV8-61A0A075B6I0 122 aa7.07□□□□□ -1.28
CDH1-210ENST00000566612 COA5Q86WW8 74 aa7.07□□□□□ -1.28
CDH1-210ENST00000566612 SPRR1BP22528 89 aa7.06□□□□□ -1.28
CDH1-210ENST00000566612 LINC00472Q9H8W2 130 aa7.06□□□□□ -1.28
CDH1-210ENST00000566612 FAM229BQ4G0N7 80 aa7.06□□□□□ -1.28
CDH1-210ENST00000566612 Q5XG85 94 aa7.04□□□□□ -1.28
CDH1-210ENST00000566612 MMP24-AS1A0A0U1RRL7 71 aa7.03□□□□□ -1.28
CDH1-210ENST00000566612 FP248Q71RG6 208 aaPredicted RBP7.03□□□□□ -1.28
CDH1-210ENST00000566612 PLAC8Q9NZF1 115 aa7.03□□□□□ -1.28
CDH1-210ENST00000566612 Q96NJ1 140 aa7.03□□□□□ -1.28
CDH1-210ENST00000566612 LOC101927531A0A1B0GV80 90 aa7.02□□□□□ -1.29
CDH1-210ENST00000566612 ACYP2P14621 99 aa7.01□□□□□ -1.29
CDH1-210ENST00000566612 C8orf87E5RJ46 101 aa6.99□□□□□ -1.29
CDH1-210ENST00000566612 FAM229AH3BQW9 127 aa6.99□□□□□ -1.29
CDH1-210ENST00000566612 Q6ZRN7 208 aaPredicted RBP6.99□□□□□ -1.29
CDH1-210ENST00000566612 C7orf65Q6ZTY9 151 aa6.99□□□□□ -1.29
CDH1-210ENST00000566612 KRTAP10-2P60368 255 aa6.98□□□□□ -1.29
CDH1-210ENST00000566612 SPANXA2-OT1Q8N9U9 137 aa6.95□□□□□ -1.3
CDH1-210ENST00000566612 Q6ZR54 194 aa6.94□□□□□ -1.3
CDH1-210ENST00000566612 A0A1B0GU69 56 aa6.93□□□□□ -1.3
CDH1-210ENST00000566612 CYP4F30PQ9H0H9 118 aa6.93□□□□□ -1.3
CDH1-210ENST00000566612 SRRM2Q9UQ35 2752 aaKnown RBP6.92□□□□□ -1.3
CDH1-210ENST00000566612 PRR26Q8N8Z3 221 aa6.92□□□□□ -1.3
CDH1-210ENST00000566612 C9orf92A6NGG3 77 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms