RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 NDUFB1O75438 58 aa8.15□□□□□ -1.11
USB1-207ENST00000563149 PHF5AQ7RTV0 110 aaKnown RBP8.15□□□□□ -1.11
USB1-207ENST00000563149 FAM229BQ4G0N7 80 aa8.14□□□□□ -1.11
USB1-207ENST00000563149 PRO0628Q9UI54 55 aa8.14□□□□□ -1.11
USB1-207ENST00000563149 hDV103S1A0JD37 113 aa8.13□□□□□ -1.11
USB1-207ENST00000563149 LINC00336Q6ZUF6 198 aa8.13□□□□□ -1.11
USB1-207ENST00000563149 B9D2Q9BPU9 175 aa8.13□□□□□ -1.11
USB1-207ENST00000563149 CYP4F30PQ9H0H9 118 aa8.13□□□□□ -1.11
USB1-207ENST00000563149 FLNBO75369 2602 aaKnown RBP8.13□□□□□ -1.11
USB1-207ENST00000563149 F8P00451 2351 aa8.13□□□□□ -1.11
USB1-207ENST00000563149 KRTAP29-1A8MX34 341 aaPredicted RBP8.12□□□□□ -1.11
USB1-207ENST00000563149 MP68P56378 58 aa8.12□□□□□ -1.11
USB1-207ENST00000563149 H3BPC8 53 aa8.12□□□□□ -1.11
USB1-207ENST00000563149 FBN1P35555 2871 aaKnown RBP8.11□□□□□ -1.11
USB1-207ENST00000563149 DEFB116Q30KQ4 102 aa8.11□□□□□ -1.11
USB1-207ENST00000563149 WFDC13Q8IUB5 93 aa8.11□□□□□ -1.11
USB1-207ENST00000563149 KRTAP11-1Q8IUC1 163 aa8.11□□□□□ -1.11
USB1-207ENST00000563149 CHTF8P0CG12 524 aa8.1□□□□□ -1.11
USB1-207ENST00000563149 PRR15Q8IV56 129 aa8.1□□□□□ -1.11
USB1-207ENST00000563149 LRCOL1A6NCL2 159 aa8.1□□□□□ -1.11
USB1-207ENST00000563149 A8MWP4 228 aa8.1□□□□□ -1.11
USB1-207ENST00000563149 LINC00472Q9H8W2 130 aa8.1□□□□□ -1.11
USB1-207ENST00000563149 RPL37AP61513 92 aaKnown RBP8.08□□□□□ -1.12
USB1-207ENST00000563149 CASC2Q6XLA1 102 aa8.08□□□□□ -1.12
USB1-207ENST00000563149 C1orf64Q8NEQ6 169 aa8.08□□□□□ -1.12
USB1-207ENST00000563149 MPLKIPQ8TAP9 179 aa8.07□□□□□ -1.12
USB1-207ENST00000563149 TRAV22A0A0B4J277 110 aa8.07□□□□□ -1.12
USB1-207ENST00000563149 KRTAP13-1Q8IUC0 172 aa8.07□□□□□ -1.12
USB1-207ENST00000563149 MAST4O15021 2626 aa8.07□□□□□ -1.12
USB1-207ENST00000563149 NBDYA0A0U1RRE5 68 aa8.06□□□□□ -1.12
USB1-207ENST00000563149 Q1T7F1 81 aa8.05□□□□□ -1.12
USB1-207ENST00000563149 STAB1Q9NY15 2570 aa8.04□□□□□ -1.12
USB1-207ENST00000563149 SPANXA2-OT1Q8N9U9 137 aa8.04□□□□□ -1.12
USB1-207ENST00000563149 H0Y9P7 68 aa8.03□□□□□ -1.12
USB1-207ENST00000563149 Q6ZRN7 208 aaPredicted RBP8.03□□□□□ -1.12
USB1-207ENST00000563149 LINC00208Q96KT6 92 aa8.03□□□□□ -1.12
USB1-207ENST00000563149 NUPR2A6NF83 97 aa8.02□□□□□ -1.13
USB1-207ENST00000563149 DYNC2H1Q8NCM8 4307 aaKnown RBP8□□□□□ -1.13
USB1-207ENST00000563149 DNAH9Q9NYC9 4486 aa8□□□□□ -1.13
USB1-207ENST00000563149 SPACA4Q8TDM5 124 aa7.99□□□□□ -1.13
USB1-207ENST00000563149 DNAH10Q8IVF4 4471 aa7.99□□□□□ -1.13
USB1-207ENST00000563149 MMP24-AS1A0A0U1RRL7 71 aa7.99□□□□□ -1.13
USB1-207ENST00000563149 LINC00483Q53H64 154 aa7.99□□□□□ -1.13
USB1-207ENST00000563149 MDFIQ99750 246 aa7.99□□□□□ -1.13
USB1-207ENST00000563149 PANO1I0J062 215 aa7.98□□□□□ -1.13
USB1-207ENST00000563149 BRK1Q8WUW1 75 aa7.98□□□□□ -1.13
USB1-207ENST00000563149 V9GYY9 64 aa7.98□□□□□ -1.13
USB1-207ENST00000563149 ZNF706Q9Y5V0 76 aaPredicted RBP7.97□□□□□ -1.13
USB1-207ENST00000563149 MOBPQ13875 183 aa7.95□□□□□ -1.14
USB1-207ENST00000563149 ASB16-AS1Q495Z4 193 aa7.95□□□□□ -1.14
USB1-207ENST00000563149 TP53AIP1Q9HCN2 124 aa7.95□□□□□ -1.14
USB1-207ENST00000563149 PRR4Q16378 134 aa7.94□□□□□ -1.14
USB1-207ENST00000563149 Q96NJ1 140 aa7.94□□□□□ -1.14
USB1-207ENST00000563149 NOTCH1P46531 2555 aa7.94□□□□□ -1.14
USB1-207ENST00000563149 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.94□□□□□ -1.14
USB1-207ENST00000563149 IGLV9-49A0A0B4J1Y8 123 aa7.92□□□□□ -1.14
USB1-207ENST00000563149 A0A087WTM6 91 aa7.92□□□□□ -1.14
USB1-207ENST00000563149 C8orf17Q9NRJ1 99 aa7.9□□□□□ -1.14
USB1-207ENST00000563149 WWC2-AS2Q96NR7 200 aa7.89□□□□□ -1.15
USB1-207ENST00000563149 IGLV7-46A0A075B6I9 117 aa7.89□□□□□ -1.15
USB1-207ENST00000563149 IGLV5-52A0A0A0MRZ9 124 aa7.89□□□□□ -1.15
USB1-207ENST00000563149 C1orf195Q5TG92 126 aa7.88□□□□□ -1.15
USB1-207ENST00000563149 PLAC8Q9NZF1 115 aa7.88□□□□□ -1.15
USB1-207ENST00000563149 NBEAL1Q6ZS30 2694 aa7.87□□□□□ -1.15
USB1-207ENST00000563149 Q6ZR54 194 aa7.87□□□□□ -1.15
USB1-207ENST00000563149 A0A1B0GVX0 72 aa7.87□□□□□ -1.15
USB1-207ENST00000563149 RTL8CO15255 209 aa7.87□□□□□ -1.15
USB1-207ENST00000563149 ZNF861PO60384 105 aa7.87□□□□□ -1.15
USB1-207ENST00000563149 PSORS1C2Q9UIG4 136 aa7.87□□□□□ -1.15
USB1-207ENST00000563149 CDK2AP2O75956 126 aa7.86□□□□□ -1.15
USB1-207ENST00000563149 LIMD2Q9BT23 127 aa7.85□□□□□ -1.15
USB1-207ENST00000563149 LYSTQ99698 3801 aa7.85□□□□□ -1.15
USB1-207ENST00000563149 PSPHP1O15172 72 aa7.84□□□□□ -1.15
USB1-207ENST00000563149 COL6A5A8TX70 2615 aa7.83□□□□□ -1.16
USB1-207ENST00000563149 Q8N9P0 234 aaPredicted RBP7.83□□□□□ -1.16
USB1-207ENST00000563149 MRPL34Q9BQ48 92 aaKnown RBP7.83□□□□□ -1.16
USB1-207ENST00000563149 PLECQ15149 4684 aaKnown RBP7.82□□□□□ -1.16
USB1-207ENST00000563149 IGHV6-1A0A0B4J1U7 121 aa7.82□□□□□ -1.16
USB1-207ENST00000563149 A8MUN3 132 aa7.8□□□□□ -1.16
USB1-207ENST00000563149 COA5Q86WW8 74 aa7.8□□□□□ -1.16
USB1-207ENST00000563149 COL7A1Q02388 2944 aa7.79□□□□□ -1.16
USB1-207ENST00000563149 VPS13DQ5THJ4 4388 aa7.79□□□□□ -1.16
USB1-207ENST00000563149 Q5VV11 94 aa7.79□□□□□ -1.16
USB1-207ENST00000563149 DNAH7Q8WXX0 4024 aa7.78□□□□□ -1.16
USB1-207ENST00000563149 NDUFS5O43920 106 aa7.78□□□□□ -1.16
USB1-207ENST00000563149 CD164Q04900 197 aa7.78□□□□□ -1.16
USB1-207ENST00000563149 STAB2Q8WWQ8 2551 aa7.78□□□□□ -1.16
USB1-207ENST00000563149 PCOTHQ58A44 107 aa7.76□□□□□ -1.17
USB1-207ENST00000563149 IGLV7-43P04211 117 aa7.75□□□□□ -1.17
USB1-207ENST00000563149 LOC101927531A0A1B0GV80 90 aa7.74□□□□□ -1.17
USB1-207ENST00000563149 SSBP3-AS1Q7Z2R9 100 aa7.74□□□□□ -1.17
USB1-207ENST00000563149 ANAPC11Q9NYG5 84 aa7.74□□□□□ -1.17
USB1-207ENST00000563149 MGAM2Q2M2H8 2515 aa7.74□□□□□ -1.17
USB1-207ENST00000563149 CSMD3Q7Z407 3707 aa7.74□□□□□ -1.17
USB1-207ENST00000563149 C1orf134Q5TEV5 83 aa7.74□□□□□ -1.17
USB1-207ENST00000563149 SRRM2Q9UQ35 2752 aaKnown RBP7.73□□□□□ -1.17
USB1-207ENST00000563149 PRR15LQ9BU68 103 aa7.72□□□□□ -1.17
USB1-207ENST00000563149 C8orf87E5RJ46 101 aa7.71□□□□□ -1.17
USB1-207ENST00000563149 Q75L30 129 aa7.71□□□□□ -1.17
USB1-207ENST00000563149 DNAH17Q9UFH2 4485 aa7.71□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms