RNA–Protein interactions for RNA: ENST00000562836.5

CDH1-205, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 2,759 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-205ENST00000562836 CFAP46Q8IYW2 2715 aa5.57□□□□□ -1.52
CDH1-205ENST00000562836 ABCA2Q9BZC7 2435 aa5.57□□□□□ -1.52
CDH1-205ENST00000562836 UTP20O75691 2785 aaKnown RBP5.57□□□□□ -1.52
CDH1-205ENST00000562836 UNQ6190/PRO20217Q6UXQ8 127 aa5.56□□□□□ -1.52
CDH1-205ENST00000562836 ACACBO00763 2458 aa5.56□□□□□ -1.52
CDH1-205ENST00000562836 KRTAP11-1Q8IUC1 163 aa5.55□□□□□ -1.52
CDH1-205ENST00000562836 ZFYVE26Q68DK2 2539 aa5.55□□□□□ -1.52
CDH1-205ENST00000562836 CACNA1AO00555 2505 aa5.55□□□□□ -1.52
CDH1-205ENST00000562836 FLNCQ14315 2725 aa5.54□□□□□ -1.52
CDH1-205ENST00000562836 DEFB131AP59861 70 aa5.54□□□□□ -1.52
CDH1-205ENST00000562836 IGSF10Q6WRI0 2623 aa5.54□□□□□ -1.52
CDH1-205ENST00000562836 CELSR2Q9HCU4 2923 aa5.53□□□□□ -1.52
CDH1-205ENST00000562836 C10orf99Q6UWK7 81 aa5.53□□□□□ -1.52
CDH1-205ENST00000562836 C15orf56Q8N910 161 aa5.51□□□□□ -1.53
CDH1-205ENST00000562836 SPG11Q96JI7 2443 aa5.51□□□□□ -1.53
CDH1-205ENST00000562836 Q6ZRX8 168 aa5.5□□□□□ -1.53
CDH1-205ENST00000562836 CENPEQ02224 2701 aa5.5□□□□□ -1.53
CDH1-205ENST00000562836 ALMS1Q8TCU4 4167 aa5.5□□□□□ -1.53
CDH1-205ENST00000562836 MYO18BQ8IUG5 2567 aa5.49□□□□□ -1.53
CDH1-205ENST00000562836 USP9XQ93008 2570 aaPredicted RBP5.49□□□□□ -1.53
CDH1-205ENST00000562836 TP53AIP1Q9HCN2 124 aa5.49□□□□□ -1.53
CDH1-205ENST00000562836 MMP24-AS1A0A0U1RRL7 71 aa5.48□□□□□ -1.53
CDH1-205ENST00000562836 USP24Q9UPU5 2620 aa5.48□□□□□ -1.53
CDH1-205ENST00000562836 PSORS1C2Q9UIG4 136 aa5.48□□□□□ -1.53
CDH1-205ENST00000562836 CREBBPQ92793 2442 aa5.47□□□□□ -1.53
CDH1-205ENST00000562836 SLURP1P55000 103 aa5.46□□□□□ -1.53
CDH1-205ENST00000562836 CAMK2N1Q7Z7J9 78 aa5.46□□□□□ -1.53
CDH1-205ENST00000562836 EPG5Q9HCE0 2579 aa5.46□□□□□ -1.54
CDH1-205ENST00000562836 TPRXLQ17RH7 258 aa5.45□□□□□ -1.54
CDH1-205ENST00000562836 FAM208BQ5VWN6 2430 aa5.45□□□□□ -1.54
CDH1-205ENST00000562836 ZNF462Q96JM2 2506 aa5.45□□□□□ -1.54
CDH1-205ENST00000562836 POLQO75417 2590 aa5.44□□□□□ -1.54
CDH1-205ENST00000562836 UBR5O95071 2799 aaPredicted RBP5.44□□□□□ -1.54
CDH1-205ENST00000562836 CSPG4Q6UVK1 2322 aa5.44□□□□□ -1.54
CDH1-205ENST00000562836 DEFB136Q30KP8 78 aa5.44□□□□□ -1.54
CDH1-205ENST00000562836 IGFL1Q6UW32 110 aa5.44□□□□□ -1.54
CDH1-205ENST00000562836 NBPF19A0A087WUL8 3843 aa5.43□□□□□ -1.54
CDH1-205ENST00000562836 C4orf3Q8WVX3 66 aa5.43□□□□□ -1.54
CDH1-205ENST00000562836 LRRK2Q5S007 2527 aa5.43□□□□□ -1.54
CDH1-205ENST00000562836 Q6YL49 198 aa5.43□□□□□ -1.54
CDH1-205ENST00000562836 H0YAA0 97 aa5.42□□□□□ -1.54
CDH1-205ENST00000562836 DOPEY1Q5JWR5 2465 aa5.42□□□□□ -1.54
CDH1-205ENST00000562836 FBN2P35556 2912 aa5.42□□□□□ -1.54
CDH1-205ENST00000562836 ZANQ9Y493 2812 aa5.41□□□□□ -1.54
CDH1-205ENST00000562836 K7EIL1 84 aa5.4□□□□□ -1.54
CDH1-205ENST00000562836 NOP10Q9NPE3 64 aaKnown RBP5.4□□□□□ -1.55
CDH1-205ENST00000562836 C16orf74Q96GX8 76 aa5.39□□□□□ -1.55
CDH1-205ENST00000562836 USP9YO00507 2555 aaPredicted RBP5.39□□□□□ -1.55
CDH1-205ENST00000562836 ZNF469Q96JG9 3925 aaPredicted RBP5.39□□□□□ -1.55
CDH1-205ENST00000562836 ABCA12Q86UK0 2595 aa5.39□□□□□ -1.55
CDH1-205ENST00000562836 PTPN13Q12923 2485 aa5.37□□□□□ -1.55
CDH1-205ENST00000562836 LELP1Q5T871 98 aa5.37□□□□□ -1.55
CDH1-205ENST00000562836 C10orf95Q9H7T3 257 aa5.37□□□□□ -1.55
CDH1-205ENST00000562836 A0A1B0GUV1 79 aa5.36□□□□□ -1.55
CDH1-205ENST00000562836 KRTAP23-1A1A580 65 aa5.36□□□□□ -1.55
CDH1-205ENST00000562836 NF1P21359 2839 aa5.36□□□□□ -1.55
CDH1-205ENST00000562836 NAV2Q8IVL1 2488 aa5.35□□□□□ -1.55
CDH1-205ENST00000562836 GIG44P09565 113 aaPredicted RBP5.35□□□□□ -1.55
CDH1-205ENST00000562836 CUBNO60494 3623 aa5.35□□□□□ -1.55
CDH1-205ENST00000562836 Q6ZSA8 131 aa5.35□□□□□ -1.55
CDH1-205ENST00000562836 GVQW2A0A096LPI5 108 aaPredicted RBP5.33□□□□□ -1.56
CDH1-205ENST00000562836 MAPK1IP1LQ8NDC0 245 aa5.33□□□□□ -1.56
CDH1-205ENST00000562836 TENM4Q6N022 2769 aa5.32□□□□□ -1.56
CDH1-205ENST00000562836 MXRA5Q9NR99 2828 aa5.32□□□□□ -1.56
CDH1-205ENST00000562836 TLN2Q9Y4G6 2542 aa5.32□□□□□ -1.56
CDH1-205ENST00000562836 TEX15Q9BXT5 2789 aa5.32□□□□□ -1.56
CDH1-205ENST00000562836 LY6G6CO95867 125 aa5.31□□□□□ -1.56
CDH1-205ENST00000562836 A0A096LPF7 62 aa5.31□□□□□ -1.56
CDH1-205ENST00000562836 APCP25054 2843 aa5.31□□□□□ -1.56
CDH1-205ENST00000562836 NOTCH3Q9UM47 2321 aa5.3□□□□□ -1.56
CDH1-205ENST00000562836 KRTAP10-9P60411 292 aa5.3□□□□□ -1.56
CDH1-205ENST00000562836 CCDC168Q8NDH2 2452 aa5.29□□□□□ -1.56
CDH1-205ENST00000562836 MYO9AB2RTY4 2548 aa5.28□□□□□ -1.56
CDH1-205ENST00000562836 WWC2-AS2Q96NR7 200 aa5.28□□□□□ -1.56
CDH1-205ENST00000562836 SONP18583 2426 aaKnown RBP5.28□□□□□ -1.56
CDH1-205ENST00000562836 TENM2Q9NT68 2774 aa5.27□□□□□ -1.57
CDH1-205ENST00000562836 FBN1P35555 2871 aaKnown RBP5.27□□□□□ -1.57
CDH1-205ENST00000562836 A0A1B0GU33 70 aa5.27□□□□□ -1.57
CDH1-205ENST00000562836 PRO0255Q9UI72 69 aa5.27□□□□□ -1.57
CDH1-205ENST00000562836 SRRM2Q9UQ35 2752 aaKnown RBP5.26□□□□□ -1.57
CDH1-205ENST00000562836 DEFB130BP0DP73 79 aa5.26□□□□□ -1.57
CDH1-205ENST00000562836 DEFB130AP0DP74 79 aa5.26□□□□□ -1.57
CDH1-205ENST00000562836 HELZ2Q9BYK8 2649 aaKnown RBP5.26□□□□□ -1.57
CDH1-205ENST00000562836 MRPL34Q9BQ48 92 aaKnown RBP5.26□□□□□ -1.57
CDH1-205ENST00000562836 KMT2BQ9UMN6 2715 aaPredicted RBP5.26□□□□□ -1.57
CDH1-205ENST00000562836 ITPR2Q14571 2701 aa5.25□□□□□ -1.57
CDH1-205ENST00000562836 ITPR3Q14573 2671 aa5.24□□□□□ -1.57
CDH1-205ENST00000562836 ACANP16112 2415 aa5.24□□□□□ -1.57
CDH1-205ENST00000562836 SPINK1P00995 79 aa5.24□□□□□ -1.57
CDH1-205ENST00000562836 KRTAP3-3Q9BYR6 98 aa5.24□□□□□ -1.57
CDH1-205ENST00000562836 KRTAP3-2Q9BYR7 98 aa5.24□□□□□ -1.57
CDH1-205ENST00000562836 FLNAP21333 2647 aaKnown RBP5.23□□□□□ -1.57
CDH1-205ENST00000562836 SETD2Q9BYW2 2564 aaPredicted RBP5.22□□□□□ -1.57
CDH1-205ENST00000562836 AKAP9Q99996 3911 aa5.22□□□□□ -1.57
CDH1-205ENST00000562836 JMJD1CQ15652 2540 aa5.21□□□□□ -1.57
CDH1-205ENST00000562836 F8P00451 2351 aa5.21□□□□□ -1.58
CDH1-205ENST00000562836 GCN1Q92616 2671 aaKnown RBP5.2□□□□□ -1.58
CDH1-205ENST00000562836 HECTD1Q9ULT8 2610 aa5.2□□□□□ -1.58
CDH1-205ENST00000562836 MTORP42345 2549 aa5.19□□□□□ -1.58
CDH1-205ENST00000562836 SETXQ7Z333 2677 aaKnown RBP5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 361.6 ms