RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 HERVK_113P61574 105 aa2.39□□□□□ -2.03
SPG11-211ENST00000558561 OR13C6PQ8NH95 151 aa2.39□□□□□ -2.03
SPG11-211ENST00000558561 MUC17Q685J3 4493 aa2.39□□□□□ -2.03
SPG11-211ENST00000558561 TRBV10-2A0A0K0K1G8 114 aa2.38□□□□□ -2.03
SPG11-211ENST00000558561 KRTAP12-2P59991 146 aa2.38□□□□□ -2.03
SPG11-211ENST00000558561 FAM229BQ4G0N7 80 aa2.38□□□□□ -2.03
SPG11-211ENST00000558561 S100A7L2Q5SY68 101 aa2.38□□□□□ -2.03
SPG11-211ENST00000558561 SFTA2Q6UW10 78 aa2.38□□□□□ -2.03
SPG11-211ENST00000558561 CEND1Q8N111 149 aa2.38□□□□□ -2.03
SPG11-211ENST00000558561 LINC00304Q8N9R0 145 aa2.38□□□□□ -2.03
SPG11-211ENST00000558561 KRTAP4-1Q9BYQ7 146 aa2.38□□□□□ -2.03
SPG11-211ENST00000558561 IGLV8-61A0A075B6I0 122 aa2.37□□□□□ -2.03
SPG11-211ENST00000558561 TRAV23DV6A0A075B6W5 121 aa2.37□□□□□ -2.03
SPG11-211ENST00000558561 LINC00587B1AMM8 73 aa2.37□□□□□ -2.03
SPG11-211ENST00000558561 ZNF73O43830 326 aaPredicted RBP2.37□□□□□ -2.03
SPG11-211ENST00000558561 TIMM17BO60830 172 aa2.37□□□□□ -2.03
SPG11-211ENST00000558561 RPL13AP40429 203 aaKnown RBP2.37□□□□□ -2.03
SPG11-211ENST00000558561 C6orf99Q4VX62 202 aa2.37□□□□□ -2.03
SPG11-211ENST00000558561 HRCT1Q6UXD1 115 aa2.37□□□□□ -2.03
SPG11-211ENST00000558561 Q6ZRX8 168 aa2.37□□□□□ -2.03
SPG11-211ENST00000558561 DEFB105AQ8NG35 78 aa2.37□□□□□ -2.03
SPG11-211ENST00000558561 C14orf144Q96I85 54 aa2.37□□□□□ -2.03
SPG11-211ENST00000558561 SPANXDQ9BXN6 97 aa2.37□□□□□ -2.03
SPG11-211ENST00000558561 SPANXB1Q9NS25 103 aaPredicted RBP2.37□□□□□ -2.03
SPG11-211ENST00000558561 SPANXCQ9NY87 97 aa2.37□□□□□ -2.03
SPG11-211ENST00000558561 S100A2P29034 98 aa2.36□□□□□ -2.03
SPG11-211ENST00000558561 MOBPQ13875 183 aa2.36□□□□□ -2.03
SPG11-211ENST00000558561 LINC00483Q53H64 154 aa2.36□□□□□ -2.03
SPG11-211ENST00000558561 SCGB1D4Q6XE38 83 aa2.36□□□□□ -2.03
SPG11-211ENST00000558561 SMIM11BQ8TCY0 68 aa2.36□□□□□ -2.03
SPG11-211ENST00000558561 C12orf57Q99622 126 aa2.36□□□□□ -2.03
SPG11-211ENST00000558561 MIEN1Q9BRT3 115 aa2.36□□□□□ -2.03
SPG11-211ENST00000558561 A6NDN8 102 aa2.35□□□□□ -2.03
SPG11-211ENST00000558561 S100A6P06703 90 aa2.35□□□□□ -2.03
SPG11-211ENST00000558561 COX7BP24311 80 aa2.35□□□□□ -2.03
SPG11-211ENST00000558561 MUC2Q02817 5179 aa2.34□□□□□ -2.03
SPG11-211ENST00000558561 C20orf202A1L168 122 aa2.34□□□□□ -2.03
SPG11-211ENST00000558561 H7C2G1 150 aa2.34□□□□□ -2.03
SPG11-211ENST00000558561 ELOF1P60002 83 aaKnown RBP2.34□□□□□ -2.03
SPG11-211ENST00000558561 C2orf91Q6ZV80 131 aa2.34□□□□□ -2.03
SPG11-211ENST00000558561 COX8AP10176 69 aa2.33□□□□□ -2.04
SPG11-211ENST00000558561 IFITM1P13164 125 aa2.33□□□□□ -2.04
SPG11-211ENST00000558561 SPRR1BP22528 89 aa2.33□□□□□ -2.04
SPG11-211ENST00000558561 AKR1D1P51857 326 aa2.33□□□□□ -2.04
SPG11-211ENST00000558561 JOSD1Q15040 202 aaPredicted RBP2.33□□□□□ -2.04
SPG11-211ENST00000558561 TAL2Q16559 108 aa2.33□□□□□ -2.04
SPG11-211ENST00000558561 KRTAP13-3Q3SY46 172 aa2.33□□□□□ -2.04
SPG11-211ENST00000558561 SPATA45Q537H7 98 aa2.33□□□□□ -2.04
SPG11-211ENST00000558561 PYY3Q5JQD4 70 aa2.33□□□□□ -2.04
SPG11-211ENST00000558561 C9orf153Q5TBE3 101 aa2.33□□□□□ -2.04
SPG11-211ENST00000558561 SSBP3-AS1Q7Z2R9 100 aa2.33□□□□□ -2.04
SPG11-211ENST00000558561 ZNF706Q9Y5V0 76 aaPredicted RBP2.32□□□□□ -2.04
SPG11-211ENST00000558561 FXYD2P54710 66 aa2.31□□□□□ -2.04
SPG11-211ENST00000558561 SPAG11AQ6PDA7 123 aa2.31□□□□□ -2.04
SPG11-211ENST00000558561 LINC00575Q6W349 94 aa2.31□□□□□ -2.04
SPG11-211ENST00000558561 HIST1H4GQ99525 98 aa2.31□□□□□ -2.04
SPG11-211ENST00000558561 IGLV5-48A0A075B6I7 105 aa2.3□□□□□ -2.04
SPG11-211ENST00000558561 TRAV13-2A0A0B4J235 113 aa2.3□□□□□ -2.04
SPG11-211ENST00000558561 TEX49A0A1B0GTD5 131 aa2.3□□□□□ -2.04
SPG11-211ENST00000558561 A0A1B0GWB2 263 aa2.3□□□□□ -2.04
SPG11-211ENST00000558561 C9orf92A6NGG3 77 aa2.3□□□□□ -2.04
SPG11-211ENST00000558561 HSBP1L1C9JCN9 74 aa2.3□□□□□ -2.04
SPG11-211ENST00000558561 DLEU1O43261 78 aa2.3□□□□□ -2.04
SPG11-211ENST00000558561 SPINK1P00995 79 aa2.3□□□□□ -2.04
SPG11-211ENST00000558561 HINT1P49773 126 aaPredicted RBP2.3□□□□□ -2.04
SPG11-211ENST00000558561 S100A12P80511 92 aa2.3□□□□□ -2.04
SPG11-211ENST00000558561 Q6ZVH6 145 aa2.3□□□□□ -2.04
SPG11-211ENST00000558561 FAT4Q6V0I7 4981 aa2.3□□□□□ -2.04
SPG11-211ENST00000558561 TRBV7-6A0A0J9YX20 115 aa2.29□□□□□ -2.04
SPG11-211ENST00000558561 hADV29S1A0JD25 119 aa2.29□□□□□ -2.04
SPG11-211ENST00000558561 K7ERJ3 54 aa2.29□□□□□ -2.04
SPG11-211ENST00000558561 TPRXLQ17RH7 258 aa2.29□□□□□ -2.04
SPG11-211ENST00000558561 C1orf195Q5TG92 126 aa2.29□□□□□ -2.04
SPG11-211ENST00000558561 SLC25A34Q6PIV7 304 aa2.29□□□□□ -2.04
SPG11-211ENST00000558561 Q6ZQY7 126 aa2.29□□□□□ -2.04
SPG11-211ENST00000558561 PRO1933Q9H354 126 aa2.29□□□□□ -2.04
SPG11-211ENST00000558561 HIGD1BQ9P298 99 aa2.29□□□□□ -2.04
SPG11-211ENST00000558561 LAMTOR3Q9UHA4 124 aa2.29□□□□□ -2.04
SPG11-211ENST00000558561 H3BUT2 72 aa2.28□□□□□ -2.04
SPG11-211ENST00000558561 IGFL1Q6UW32 110 aa2.28□□□□□ -2.04
SPG11-211ENST00000558561 CLEC2BQ92478 149 aa2.28□□□□□ -2.04
SPG11-211ENST00000558561 VAMP8Q9BV40 100 aa2.28□□□□□ -2.04
SPG11-211ENST00000558561 SLC25A20O43772 301 aa2.27□□□□□ -2.05
SPG11-211ENST00000558561 KRTAP19-2Q3LHN2 52 aa2.27□□□□□ -2.05
SPG11-211ENST00000558561 OCIAD2Q56VL3 154 aa2.27□□□□□ -2.05
SPG11-211ENST00000558561 A0A1B0GV72 72 aa2.26□□□□□ -2.05
SPG11-211ENST00000558561 ASB16-AS1Q495Z4 193 aa2.26□□□□□ -2.05
SPG11-211ENST00000558561 PCOTHQ58A44 107 aa2.26□□□□□ -2.05
SPG11-211ENST00000558561 BVES-AS1Q5T3Y7 98 aa2.26□□□□□ -2.05
SPG11-211ENST00000558561 FP248Q71RG6 208 aaPredicted RBP2.26□□□□□ -2.05
SPG11-211ENST00000558561 COPS9Q8WXC6 57 aa2.26□□□□□ -2.05
SPG11-211ENST00000558561 RAB37Q96AX2 223 aa2.26□□□□□ -2.05
SPG11-211ENST00000558561 NAA38Q9BRA0 125 aaKnown RBP2.26□□□□□ -2.05
SPG11-211ENST00000558561 NHP2Q9NX24 153 aaKnown RBP2.26□□□□□ -2.05
SPG11-211ENST00000558561 PRO1854Q9UHT4 67 aa2.26□□□□□ -2.05
SPG11-211ENST00000558561 A0A0B4J2C4 111 aa2.25□□□□□ -2.05
SPG11-211ENST00000558561 RPS29P62273 56 aaKnown RBP2.25□□□□□ -2.05
SPG11-211ENST00000558561 CTAG1AP78358 180 aa2.25□□□□□ -2.05
SPG11-211ENST00000558561 VAMP3Q15836 100 aa2.25□□□□□ -2.05
SPG11-211ENST00000558561 CBY1Q9Y3M2 126 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms