RNA–Protein interactions for RNA: ENST00000556689.5

SHMT2-223, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-223ENST00000556689 KCNQ1DNQ9H478 68 aa7.03□□□□□ -1.28
SHMT2-223ENST00000556689 SLC25A20O43772 301 aa7.02□□□□□ -1.29
SHMT2-223ENST00000556689 LINC00483Q53H64 154 aa7.02□□□□□ -1.29
SHMT2-223ENST00000556689 SSBP3-AS1Q7Z2R9 100 aa7.02□□□□□ -1.29
SHMT2-223ENST00000556689 SMIM11BQ8TCY0 68 aa7.02□□□□□ -1.29
SHMT2-223ENST00000556689 SPRR1AP35321 89 aa7.01□□□□□ -1.29
SHMT2-223ENST00000556689 C6orf99Q4VX62 202 aa7.01□□□□□ -1.29
SHMT2-223ENST00000556689 GAGE2AQ6NT46 116 aa7.01□□□□□ -1.29
SHMT2-223ENST00000556689 IGLV9-49A0A0B4J1Y8 123 aa7□□□□□ -1.29
SHMT2-223ENST00000556689 TRBV7-6A0A0J9YX20 115 aa7□□□□□ -1.29
SHMT2-223ENST00000556689 SCGB1C2P0DMR2 95 aa7□□□□□ -1.29
SHMT2-223ENST00000556689 COX7BP24311 80 aa7□□□□□ -1.29
SHMT2-223ENST00000556689 MOBPQ13875 183 aa7□□□□□ -1.29
SHMT2-223ENST00000556689 KRTAP4-16G5E9R7 235 aaPredicted RBP6.99□□□□□ -1.29
SHMT2-223ENST00000556689 H0YGX0 51 aa6.99□□□□□ -1.29
SHMT2-223ENST00000556689 MT1HP80294 61 aa6.98□□□□□ -1.29
SHMT2-223ENST00000556689 Q6ZRX8 168 aa6.98□□□□□ -1.29
SHMT2-223ENST00000556689 C9orf118A6NHY6 69 aa6.97□□□□□ -1.29
SHMT2-223ENST00000556689 H3BUT2 72 aa6.97□□□□□ -1.29
SHMT2-223ENST00000556689 TRIAP1O43715 76 aa6.97□□□□□ -1.29
SHMT2-223ENST00000556689 DNAL4O96015 105 aa6.97□□□□□ -1.29
SHMT2-223ENST00000556689 FABP2P12104 132 aa6.97□□□□□ -1.29
SHMT2-223ENST00000556689 ELOF1P60002 83 aaKnown RBP6.97□□□□□ -1.29
SHMT2-223ENST00000556689 KRTAP19-2Q3LHN2 52 aa6.97□□□□□ -1.29
SHMT2-223ENST00000556689 DHRS4-AS1Q9P1J3 65 aa6.97□□□□□ -1.29
SHMT2-223ENST00000556689 GHRHP01286 108 aa6.96□□□□□ -1.3
SHMT2-223ENST00000556689 B5MCH6 92 aa6.95□□□□□ -1.3
SHMT2-223ENST00000556689 ERC2-IT1O76042 136 aa6.95□□□□□ -1.3
SHMT2-223ENST00000556689 TRBV20-1A0A075B6N2 111 aa6.94□□□□□ -1.3
SHMT2-223ENST00000556689 TAX1BP3O14907 124 aa6.94□□□□□ -1.3
SHMT2-223ENST00000556689 IGLV8-61A0A075B6I0 122 aa6.93□□□□□ -1.3
SHMT2-223ENST00000556689 A0A1B0GX51 115 aa6.93□□□□□ -1.3
SHMT2-223ENST00000556689 A0A1W2PPM0 123 aa6.93□□□□□ -1.3
SHMT2-223ENST00000556689 ATXN8Q156A1 80 aa6.93□□□□□ -1.3
SHMT2-223ENST00000556689 NAA38Q9BRA0 125 aaKnown RBP6.93□□□□□ -1.3
SHMT2-223ENST00000556689 hADV29S1A0JD25 119 aa6.92□□□□□ -1.3
SHMT2-223ENST00000556689 PCOTHQ58A44 107 aa6.92□□□□□ -1.3
SHMT2-223ENST00000556689 LORP23490 312 aaPredicted RBP6.91□□□□□ -1.3
SHMT2-223ENST00000556689 GTF2H5Q6ZYL4 71 aa6.91□□□□□ -1.3
SHMT2-223ENST00000556689 Q9BRP9 147 aa6.91□□□□□ -1.3
SHMT2-223ENST00000556689 H3BQ85 93 aa6.9□□□□□ -1.3
SHMT2-223ENST00000556689 KRTAP10-6P60371 365 aaPredicted RBP6.9□□□□□ -1.3
SHMT2-223ENST00000556689 OCIAD2Q56VL3 154 aa6.9□□□□□ -1.3
SHMT2-223ENST00000556689 C9orf153Q5TBE3 101 aa6.9□□□□□ -1.3
SHMT2-223ENST00000556689 LINC00575Q6W349 94 aa6.9□□□□□ -1.3
SHMT2-223ENST00000556689 CLEC2BQ92478 149 aa6.9□□□□□ -1.3
SHMT2-223ENST00000556689 SPCS1Q9Y6A9 102 aa6.9□□□□□ -1.3
SHMT2-223ENST00000556689 TRACP01848 142 aa6.89□□□□□ -1.31
SHMT2-223ENST00000556689 LST1O00453 97 aa6.88□□□□□ -1.31
SHMT2-223ENST00000556689 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.88□□□□□ -1.31
SHMT2-223ENST00000556689 ORMDL1Q9P0S3 153 aa6.87□□□□□ -1.31
SHMT2-223ENST00000556689 C9orf92A6NGG3 77 aa6.86□□□□□ -1.31
SHMT2-223ENST00000556689 M0R2T5 61 aa6.86□□□□□ -1.31
SHMT2-223ENST00000556689 Q6ZQY7 126 aa6.86□□□□□ -1.31
SHMT2-223ENST00000556689 PPDPFLQ8WWR9 84 aa6.86□□□□□ -1.31
SHMT2-223ENST00000556689 TCL1BO95988 128 aa6.85□□□□□ -1.31
SHMT2-223ENST00000556689 F8WEM9 126 aa6.84□□□□□ -1.31
SHMT2-223ENST00000556689 K7EP34 96 aa6.84□□□□□ -1.31
SHMT2-223ENST00000556689 FAM218AQ96MZ4 157 aa6.84□□□□□ -1.31
SHMT2-223ENST00000556689 LIMD2Q9BT23 127 aa6.84□□□□□ -1.31
SHMT2-223ENST00000556689 HRCT1Q6UXD1 115 aa6.83□□□□□ -1.32
SHMT2-223ENST00000556689 DEFB105AQ8NG35 78 aa6.83□□□□□ -1.32
SHMT2-223ENST00000556689 TEX49A0A1B0GTD5 131 aa6.82□□□□□ -1.32
SHMT2-223ENST00000556689 C9JAW5 83 aa6.82□□□□□ -1.32
SHMT2-223ENST00000556689 TMEM256-PLSCR3K7ERE1 68 aa6.82□□□□□ -1.32
SHMT2-223ENST00000556689 ST20-AS1Q8NBB2 130 aa6.82□□□□□ -1.32
SHMT2-223ENST00000556689 H3BMG7 143 aa6.81□□□□□ -1.32
SHMT2-223ENST00000556689 LAMTOR3Q9UHA4 124 aa6.8□□□□□ -1.32
SHMT2-223ENST00000556689 IGLV5-48A0A075B6I7 105 aa6.79□□□□□ -1.32
SHMT2-223ENST00000556689 H3BT86 120 aa6.79□□□□□ -1.32
SHMT2-223ENST00000556689 COX6B2Q6YFQ2 88 aa6.79□□□□□ -1.32
SHMT2-223ENST00000556689 A0A1B0GV90 55 aa6.77□□□□□ -1.33
SHMT2-223ENST00000556689 BAALC-AS2P0C853 105 aa6.77□□□□□ -1.33
SHMT2-223ENST00000556689 SPRR1BP22528 89 aa6.76□□□□□ -1.33
SHMT2-223ENST00000556689 UBE2V1Q13404 147 aa6.76□□□□□ -1.33
SHMT2-223ENST00000556689 FLGP20930 4061 aaPredicted RBP6.75□□□□□ -1.33
SHMT2-223ENST00000556689 F8W1H4 67 aa6.75□□□□□ -1.33
SHMT2-223ENST00000556689 ANKRD29Q8N6D5 301 aa6.75□□□□□ -1.33
SHMT2-223ENST00000556689 KRTAP9-7A8MTY7 169 aa6.74□□□□□ -1.33
SHMT2-223ENST00000556689 JMJD7-PLA2G4BH0Y9G9 81 aa6.74□□□□□ -1.33
SHMT2-223ENST00000556689 CD164Q04900 197 aa6.74□□□□□ -1.33
SHMT2-223ENST00000556689 NDUFV3P56181 108 aaKnown RBP6.73□□□□□ -1.33
SHMT2-223ENST00000556689 RPL37P61927 97 aaKnown RBP6.73□□□□□ -1.33
SHMT2-223ENST00000556689 C21orf62-AS1Q17RA5 79 aa6.73□□□□□ -1.33
SHMT2-223ENST00000556689 MTURNQ8N3F0 131 aa6.73□□□□□ -1.33
SHMT2-223ENST00000556689 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.71□□□□□ -1.34
SHMT2-223ENST00000556689 Q6JHZ5 121 aa6.71□□□□□ -1.34
SHMT2-223ENST00000556689 DSCR8Q96T75 97 aa6.71□□□□□ -1.34
SHMT2-223ENST00000556689 RBM3P98179 157 aaKnown RBP6.7□□□□□ -1.34
SHMT2-223ENST00000556689 C1orf195Q5TG92 126 aa6.7□□□□□ -1.34
SHMT2-223ENST00000556689 Q5XG85 94 aa6.7□□□□□ -1.34
SHMT2-223ENST00000556689 A0A1B0GV72 72 aa6.69□□□□□ -1.34
SHMT2-223ENST00000556689 PDE6GP18545 87 aa6.68□□□□□ -1.34
SHMT2-223ENST00000556689 SMIM29Q86T20 159 aa6.66□□□□□ -1.34
SHMT2-223ENST00000556689 TEN1Q86WV5 123 aa6.66□□□□□ -1.34
SHMT2-223ENST00000556689 PRO0461Q9UI25 63 aa6.66□□□□□ -1.34
SHMT2-223ENST00000556689 Q6Q795 121 aa6.64□□□□□ -1.35
SHMT2-223ENST00000556689 VPS25Q9BRG1 176 aa6.63□□□□□ -1.35
SHMT2-223ENST00000556689 C14orf132Q9NPU4 83 aa6.63□□□□□ -1.35
SHMT2-223ENST00000556689 LOC110117498A0A087WWA1 95 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms